KEGG   Rattus norvegicus (rat): 311224
Entry
311224            CDS       T01003                                 
Symbol
Ttc17
Name
(RefSeq) tetratricopeptide repeat protein 17 precursor
  KO
K24931  tetratricopeptide repeat protein 17
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    311224 (Ttc17)
Cilium and associated proteins [BR:rno03037]
 Other cilia and associated proteins
  Other cilium assembly proteins
   311224 (Ttc17)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_8 TPR_11 TPR_12 TPR_14 TPR_19 TPR_10 TPR_16 ChAPs
Other DBs
NCBI-GeneID: 311224
NCBI-ProteinID: NP_001101222
RGD: 1305410
Ensembl: ENSRNOG00000010495
UniProt: B5DEL3
Position
3:complement(100718820..100829464)
AA seq 1198 aa
MAAAIGVRGRFELLSCSGPGWLISLSALLSVVARGALATTHWVVTEDGKIQQQVDSPMNL
KHPHDLVILMRQETTVNYLKELEKQLVAQKIHIEENEDRDTGLEQRHNKEDPDCIKAKVP
LGDLDLYDGTYITLESKDVRPEDFIDTESPVPPDPEQPDCTKILELPYSIHAFQHLRGVQ
ERVNLSAPLLPKEDPIFTYLSKRLGRSIDDIGHLIHEGLQKNSSSWVLYNLASFYWRIKN
EPYQVVECTMRALHFSSRHNKDIALVNLANVLHRAHFSADAAVVVHAALDDSAFFTSYYT
LGNIYAMLGEYNHSVLCYDHALQAKPGFEQAIKRKHAVLCQQKLEQKLEAQHRSLQRTLN
ELKEYQKQHDHYLRQQEILEKHKLIQEEQILRNIIHETQMAKEAQLGNHQICRLVNQQHS
LHCQWDQPVRYHRGDIFENVDYVQFGDDSSTSSMMSVNFDVPTNQSDVSESVRSSPVAHS
VLWVWGRDSDAYRDKQHILWPKRADCTDSYPRVPLGGELPTYFLPPENKGLRIHELTSDD
YSSEEEAQTPDCSITDFRKSHTLSYLVKELEVRMDLKAKIPDDHARKILLSRIKNYTIPE
EEIGSFLFHAINKPNAPVWLILNEAGLYWRAVGNSTFAIACLQRALNLAPVQYQDIPLVN
LANLLIHYGLHLDATKLLLQALAVNSSEPLTFLSLGNAYLALKNVSGALEAFRQALKLTT
RCPECESSLKLIRCMQFYPFLYNITSSVCSGHCHEKTLDNSHDKQKYFAKPQSLDAAEEE
PSRHGADEDPVLSVENAGRDSDALRLESTVVEESNGSDEVEKSEETKMSEEILALVDEFQ
QAWPLEGLGGTLEMKGRRLDLQGIRVLKKGPQDGVAKSSCYGDCRSEDDEATEWITFQVK
RVKKPKGDHKKPPGKKVEASQAENGQRYQANLEITGPKVASPGPQEKKRDYQSMGWPSPD
ECLKLRWVELTAIVSTWLAVSSKNIDITEHIDFATPIQQPAMEPLCNGNLPTSMHTLDHL
HGVSNRASLHYTGESQLTEVLQNLGKDQYPQQSLEQIGTRIAKVLEKNQTSWVLSSMAAL
YWRVKGQGKKAIDCLRQALHYAPHQMKDVPLISLANILHNAKLWNDAVVVATMAVEIAPH
FAVNHFTLGNVYVAMEEFEKALVWYESTLKLQPEFVPAKNRIQTIQCHLMLKKGRRSP
NT seq 3597 nt   +upstreamnt  +downstreamnt
atggcggcggcaataggggtccgcggccggttcgagctgctatcttgctccggcccaggt
tggcttatcagcctttccgctttgctgagcgtggtggctcgaggggccttggccactacg
cactgggtcgtcacggaggacgggaagatccaacagcaggtggactcaccaatgaacttg
aagcatccccatgacttagtcatcttaatgagacaagaaacaaccgttaactacctcaaa
gaactagagaaacaattagttgctcaaaaaattcacatagaggagaatgaggacagagac
acaggactggaacagaggcacaataaagaagaccccgactgcatcaaggccaaagtgcct
ttgggagacctggacctttatgacggcacatatataactctagagagcaaggatgtcagg
cctgaggatttcatagacacagaatctcctgtccctccagacccagagcaacctgattgt
actaaaatcctagagcttccatatagtatacatgcttttcagcatttacggggtgtacaa
gagagagttaatctctctgcccctctcttacctaaagaagatccaatcttcacatatttg
tcgaaacgcttaggaaggagtatcgacgacataggtcacctcattcacgaaggcctacag
aagaactcttcctcctgggtactgtataacctagcttcattttactggagaataaagaat
gagccatatcaggtagtggagtgcaccatgcgagctcttcacttctcttccaggcacaat
aaagacattgccctggtcaatttggccaatgttctacacagagcgcatttctccgcggat
gctgctgtcgtggtccatgcagctctggatgacagtgccttcttcaccagctattacaca
ctggggaatatatatgcaatgctcggggagtataaccattcggtgctctgttacgaccat
gctttgcaagccaaacctgggtttgagcaagctataaagaggaagcatgctgtcctgtgt
caacaaaaactggagcagaagctagaggctcagcataggtcccttcagagaacactgaat
gagttgaaggagtaccagaagcagcatgaccactacctgcggcagcaggagatcctagag
aagcacaaactgattcaggaggagcagatcttgcgcaacatcatccacgagacacagatg
gccaaagaggcacaactgggaaatcatcagatatgcaggctggtcaaccagcagcatagt
ttgcactgccagtgggaccaacctgtacgctaccatcgaggagacatctttgaaaatgtg
gactatgttcagtttggtgatgattcatcgacctccagtatgatgtccgtgaacttcgat
gtccctacaaatcagagtgacgtcagcgaatctgtcaggtcttctcctgtagcgcattct
gttctctgggtctggggccgtgactctgatgcatatagggacaaacaacatattctttgg
cctaaaagagcagattgtacagacagctatcccagagttcccctcggtggagaactgcca
acatacttcctgcctccggagaacaaaggactcaggatccacgaactgaccagtgatgat
tattcttcagaagaggaggcccaaacccctgactgttccataactgacttcagaaaaagc
cacactctgtcctacttagtcaaagaattagaggtccgcatggatctgaaagccaaaatc
cccgatgaccatgcacgcaaaattttactttcccgtattaaaaactatactatcccagaa
gaagaaattgggtctttcttgtttcatgctattaacaagccaaatgctcctgtctggctc
attctgaatgaggcgggcctgtactggagagcagtaggaaacagcacttttgctatcgcc
tgccttcagagggctttgaatttagctccagttcaataccaagacattcctcttgtcaac
ctggccaaccttttgattcattatggccttcatctcgatgctacaaagttgctcctgcaa
gcactggctgtcaacagctccgagcccctgacctttttgagcctgggaaatgcttacctt
gctctgaagaatgtcagcggggcacttgaagccttcagacaggccttgaagttaaccacc
agatgcccagagtgtgagagcagcctgaagctgatccgctgcatgcagttttaccctttt
ctgtacaacatcacctcttctgtttgtagtggtcattgtcatgagaaaaccctggacaac
agccatgacaaacagaaatactttgccaagccacagtcattggatgctgctgaagaagag
ccctctaggcacggagcagacgaggaccctgtgctgtctgttgagaacgcagggagggac
tcagatgcccttagacttgaaagcacagtggttgaagagagcaacggttctgacgaggtg
gagaagtcagaggaaacaaagatgtcagaagagatactggccttggtggatgagtttcag
caggcctggcctctggaaggtttggggggaacattagaaatgaaggggcggcgtctggac
ctgcagggaatacgggtcctgaagaaagggccccaggatggagtagccaagagctcttgc
tatggagactgcagaagtgaagatgatgaagcaacagaatggatcacattccaggtcaag
cgtgtaaagaaacccaaaggggatcataaaaaacctcctgggaaaaaagtagaggcaagt
caagcagaaaatggacagcgttaccaagcaaacttagagatcacaggcccaaaggtggca
tctcctgggccccaggaaaaaaagcgtgactaccagagtatggggtggcccagtccagat
gagtgcctcaagctccgctgggtagagctaactgccattgtgagcacctggctagcagtg
tcttcaaaaaacattgacatcacagaacacatagactttgccacacccatacaacagcca
gcaatggaacctctgtgcaatggcaatctccccacaagcatgcataccctggaccactta
catggagtgtccaacagagccagcctgcactacaccggtgagagccagctaacagaggta
ctgcagaatcttggcaaggaccagtaccctcagcagtcgcttgaacaaatcggcacccga
attgccaaggttttggaaaaaaatcagacatcatgggtcctttccagcatggcagccctc
tactggagagtgaaaggtcaggggaaaaaagccatcgactgcctgcgccaggccctccac
tatgctccccaccagatgaaggatgtgcccctcatcagcctggccaacatcctacacaat
gccaagctctggaatgatgctgtcgtcgtggccaccatggccgtggagatcgcgccacac
ttcgctgtgaaccacttcactctgggcaatgtctatgtggcaatggaagaatttgagaag
gccctggtgtggtacgagtcaacgctgaagctgcaaccagagtttgtacctgccaagaat
cgaatccagacaatccagtgccacctcatgctgaagaagggccggcgctctccctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (13)   
   RefSeq(nuc) (9)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (41)   

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