KEGG   Rattus norvegicus (rat): 311334
Entry
311334            CDS       T01003                                 
Symbol
Exd1
Name
(RefSeq) piRNA biogenesis protein EXD1
  KO
K18740  exonuclease 3'-5' domain-containing protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    311334 (Exd1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     311334 (Exd1)
SSDB
Motif
Pfam: DNA_pol_A_exo1
Other DBs
NCBI-GeneID: 311334
NCBI-ProteinID: NP_001101231
RGD: 1561009
Ensembl: ENSRNOG00000025360
UniProt: A6HPF6 D4AD21
Position
3:complement(126961800..126989738)
AA seq 562 aa
MDASSDYHFLNQILWRRVKLTLVSGIFEGVLQHVDPNKIVVLKNVKNIESGRSVPGVKMF
FGHEILNVELMDEAEGASGEKVNSVSINTERAGMEKMKKEDLNVCEPASPAPEVPTSSLL
SDLKYCPSEEEEVTYTVIDQFQQKFGAAMLHIKKQSVLSVAAEGANVCRHGKLCWLQVAT
NSRVYLFDIFLLGSRAFNNGLQMILEDKRILKVIHDCRWLSDCLSHQYGIMLSNVFDTQV
ADVLQFSMETGGFLPNCISTLQECLIRHLKVAPKYLLFLEERQKQIQENPEVWLTRPLPP
SLLKILALETAYLLPLRLVLLDEVMSDLTTLVDAYLNTYRDGSADRLAGTEPACMELPAE
LLQLQDFQKQRRERAAKEYRVNAQGLLIRTLLHPKEPGARTVGKEEHIQGFLFCKTSGVD
RVPRFICHDSHKDENYLDKESKQTTEKSQIVPPWKEGEKSKPVCGEPAGSEDPRAQSLPP
RQAFQSQFSLKEEIEQLLLVENKGALTSSNEDTLVSPSLSQEAWEAPSESSHLPENAVVS
ALPPCPALEKTDSWISPSLNLF
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggatgccagcagtgactaccatttcctcaaccagattttgtggagaagggtgaagctc
acactggtgtctggcatctttgagggcgtgctccagcatgtggatcctaacaagattgtt
gtcctgaaaaacgtgaagaacatagagtcaggccgaagtgtcccaggagtgaaaatgttt
ttcgggcatgagattttgaatgtggaactaatggatgaagcagaaggtgcatcgggagaa
aaggtgaactctgttagcataaatacagaacgagctggaatggagaaaatgaaaaaggaa
gacttaaatgtatgtgagcctgcctcacctgcaccagaggtgccaaccagctctctcctc
agtgacctcaagtactgcccatcagaggaagaggaggtgacgtatacggtcattgatcag
ttccagcagaagtttggtgctgcgatgctccacattaagaagcagagtgtcctgagtgtc
gctgctgaaggagctaatgtgtgtcgccatgggaaactctgttggcttcaggtagccaca
aacagccgagtttacttgtttgatattttccttctgggaagccgtgctttcaacaatgga
cttcagatgatcttagaagacaagagaatcttaaaggttatccacgattgtcgctggctg
tctgattgcctgtctcatcagtatggaatcatgctgagcaatgtctttgacacacaggta
gccgatgtccttcagttttctatggaaacgggtggctttcttccaaactgtatcagtact
ttgcaggagtgtttaatcagacaccttaaagttgcccccaaataccttttgtttttagaa
gagagacagaaacagattcaggaaaatccagaagtatggctgacaagaccccttccaccc
tctttattgaaaatcttggccctggaaacagcctacctgcttccccttcggctggtgctc
ctggatgaggtgatgtcagatttgaccacactggtggatgcgtacctgaacacctaccgg
gatgggtctgcagaccggcttgccggcacagagcctgcgtgtatggagctgcctgcagag
cttcttcaactccaggacttccagaagcagcgcagagagagagctgcaaaggagtacaga
gtgaacgcacagggcctcctcataaggacgctgctacacccaaaggagccaggggctcgc
acagtggggaaagaggagcacatccagggtttcttattttgtaagacgtctggtgtagac
cgggttcctcgctttatatgtcacgactctcataaggatgagaattatttggataaagag
tctaaacaaaccacagaaaagtcacaaatcgtacctccctggaaggaaggcgaaaagagc
aaaccagtgtgtggggagccagctgggtcagaagacccgagagcccagtccctgcctccc
agacaggcatttcagtcacagttttctttaaaagaggagatagaacagttgctgttggtg
gaaaataaaggagctttaacaagctcaaatgaagacactctggtgtcgccttctctttct
caggaagcctgggaagcaccaagtgaaagctcccatcttcccgaaaatgctgtggtttct
gcacttccaccctgtccagccctggagaagacagattcatggataagtccgtctctaaat
ctgttttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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