KEGG   Rattus norvegicus (rat): 311591
Entry
311591            CDS       T01003                                 
Symbol
Rprd1b
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
  KO
K15559  regulator of Ty1 transposition protein 103
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    311591 (Rprd1b)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     311591 (Rprd1b)
SSDB
Motif
Pfam: CREPT CID CTK3 FemAB FmiP_Thoc5 HTHP PDCD7
Other DBs
NCBI-GeneID: 311591
NCBI-ProteinID: NP_001092197
RGD: 1304782
Ensembl: ENSRNOG00000012923
UniProt: B5DEK0
Position
3:167102909..167149184
AA seq 326 aa
MSSFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFL
YLANDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYGGE
FIQQLKLSMEDSKSPPPKAAEEKKSLKRTFQQIQEEEDDDYPGSYSPQDPSAGPLLTEEL
IKALQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEY
NGRLAAELEDRRQLARMLVEYTQNQKEVLSEKEKKLEEYKQKLARVTQVRKELKSHIQSL
PDLSLLPNVTGGLAPLPSAGDLFSTD
NT seq 981 nt   +upstreamnt  +downstreamnt
atgtcctccttctcagagtcggcgttggaaaagaagctctcagagctgagcaactctcag
cagagtgtgcagaccctatccctgtggctcatccaccaccgcaagcacgcaggacccatc
gtctccgtgtggcaccgcgagctccgcaaagccaaatcaaatagaaagcttacttttctc
tacttagcaaatgatgtcatccaaaacagtaaaaggaaaggacctgagttcacgagagaa
tttgaatctgtccttgtggatgctttttctcatgttgccagagaggcagatgaaggctgt
aaaaaacctttagaaagattgctgaacatctggcaagaacgaagtgtgtatggcggcgag
ttcatacagcagctgaagctgtctatggaggactccaagagccctccccccaaagcagcg
gaagagaagaagtctctaaaacgaacttttcagcagatacaggaggaggaagatgatgac
taccctggaagctactctccccaagatccttctgcagggcccctcttgactgaggagtta
atcaaagctttgcaggatctggaaaatgcagcatcaggggatgctactgttcgacagaag
attgcttccctgccccaggaagtgcaggatgtgtccctgctggaaaaaattacagacaaa
gaggcagctgaacgtctttcaaaaacagtagatgaagcatgtctgttactagcggaatat
aacgggcgcctggcagcggaactggaagaccggcgccagctggctcggatgctggtggag
tacacccagaaccaaaaagaggttttgtcagaaaaggagaaaaagctagaagaatataaa
cagaagcttgctcgagtaacccaggtccgcaaggaactcaagtcccacattcagagcttg
ccggacctctcactgctgcctaatgtcacagggggcctggcacctctgccctctgctggt
gacctcttttcaactgactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (15)   
   RefSeq(nuc) (5)   
   GenBank (5)   
   EMBL (5)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

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