KEGG   Rattus norvegicus (rat): 311607
Entry
311607            CDS       T01003                                 
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
  KO
K14436  chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    311607 (Chd6)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    311607 (Chd6)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C Chromo ResIII DEAD HDA2-3 MUN
Other DBs
NCBI-GeneID: 311607
NCBI-ProteinID: NP_001101267
RGD: 1310465
Ensembl: ENSRNOG00000016744
UniProt: D3ZA12
Position
3:complement(170016204..170177480)
AA seq 2698 aa
MKMKIQKKEKQLSKLRALNHSPMSDASVNFDYKSPSPFDCSPDQGENIEEAANHCLPQKD
FYTTEEEADTLFSRKLMSHNGMEDNGGRGTGVKKKRKKKEPGEQEGTKASKDREPKPKRK
REPKEPKEPRRAKEPKRAKEPKEAKQKDGVKKPRKPREASGTKEGKEKRSCTDCGPRTKP
KKASKDQGPTPVERKKKGKRKNETTVESLELDQSLPNPSLQSPEEPSESADSQKRRSGRQ
VKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASK
TVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHI
FTEPDEDLFNPDYIEIDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPA
KVKEFESLQILPEVKPVERPASDAWQKLETSREYKNSNRLREYQLEGMNWLLFNWYNRKN
CILADEMGLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG
SQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVVIDEAH
RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD
LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF
LTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAMIQA
AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAA
IDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKA
VKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLLRKGAY
GALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPN
FWQKWAKIAELDTEANNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTR
SRRLSDKARRYLRAECFRVEKNLLTFGWGRWKDILTHGRFKWPLNEKDMEVICRALLVYC
VKHYKGDEKIKSFIWELITPSKDGQVQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKTA
DWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPARELD
VLLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLS
AEQGVTDGTSDIPERGNIDKEDSAEDKVDGLQKQTASPSDGSDGIFGEKKDDSQAVSSAL
TARLRRLVTIYQRCNRKELCRPEILGPGNQGYWVQEEVFRRTSDMDLINKEAQKRWTRRE
QADFYRTVSSFGVVYDQEKEAFDWTQFRAISRLDKKSDENLEHYFHSFVAMCRNVCRLPT
WKDDGPPDASIYVEPITEERAAKTLYRIELLRKVREQVLTCPQLHERLQLCRPSLYLPVW
WECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTDTQAPGSLCCLYQ
GNSKLYESLTYTPMSRTSESLESEPENLVKMDSRDDHLCLPEAGLPDITCENFVSKVQEV
ISLDHDESLLPESLENMMYGKTGLSQEPRSFQEAPSTNMQSRKKTVTVSASRDESCQLPG
IEAEITSASSLMSSLEAGVAKMNIKNGKHLLVSISEEGEPCCSETGRSPESRGRLEARCL
ASPTLDTGHESGFVDLCSLSVYDSKRNFSSDQQLIDLLENKSLENKLILNQSDEEEEENE
KETLAIVASTTEKPAVLDFTQPTASIPRGKNLSFHQDEAKKGRLEVGSKTPGPQRAFPPS
ANQCHCKHIERWAHGLGSEESEGEKPKAYEPDPYRSKANNTTVEGEPAIIPTEPFKLKHE
LLKEPWKESSEGGKSFSMYVPEGSEPKSEEMDFENKDDYEKDGACHSQDYPGKYSEEESK
SSASGIAGDLGEEAQEVRAPTIAQLLQEKTLYSFSEWPKDRVIINRLDNICHVVLKGKWP
CSHQYEPSGALPTPVLSSSAGSRSSLSEPEATEHSFSNGAALAAQIQKESFLAPVFTKDE
QKHRRPYEFEVERDAKARSLEEYSASHGRPPIVLNGWHGESAIDLSCSSEGSPGATSPFP
VSASTPKIGAISSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRRKHI
EGGMDLIFLKEQTLQAGILEVHEDAGQTTLNTTHPEGPGAASSASEPTAAASSQAEKAVP
SKSLLDWLRQQADYSLDVPGFGASFSDKPKQRRPRCKEPGKLDIGSLGGEERVSAVPKEP
GLRGFLPESKFNHTLAEPVLRDAGPRRRGRRPRNELLKAPAIVADSPSGMGPLFMNGLIA
GMDLVGLQNVRNIPGIPLTGLVGFPAGFATMPTGEDVKNTLSMLPMMLPGMATVPQMFGV
GGLLNTPMATTCTTTASASLASTKSGASATEKTTEDELSGRDVKADSLVEDKPGPSPFSD
QSEPTITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQQGRHSEMAGLETQKR
KKKKTKGDNPTPEPASVCEREPGSDQNCTESSVTVSPEREHVAQAREEGLKDSNDDTN
NT seq 8097 nt   +upstreamnt  +downstreamnt
atgaaaatgaaaatacagaagaaagagaagcagttgtccaagttaagagctttgaatcac
tccccaatgtcggatgcctccgttaactttgactacaaatcaccatcaccattcgattgc
agtcctgatcagggagagaacattgaagaagctgccaatcattgtctgccccagaaggac
ttctatactactgaagaggaagctgacacccttttttctaggaagttgatgtcccataat
gggatggaggataatggaggcagaggcactggagtaaagaagaaacggaagaaaaaggag
ccaggggagcaagaggggacaaaggctagcaaggacagggagcctaagccaaagaggaaa
cgagaacctaaagagccaaaagaacccagaagggccaaggagcctaagagagccaaggag
cccaaggaggcaaagcagaaagacggcgtgaagaagccccggaagccccgggaggcctcc
ggtaccaaggagggtaaagagaagaggagctgcactgactgtggacccaggacaaagccc
aagaaggccagcaaggatcaaggaccaaccccagtggagagaaagaagaaaggaaaaagg
aaaaatgaaaccaccgtggagagtttagagctggaccagagtcttccaaacccatctctg
cagagtcctgaggagcccagtgagtctgcagacagccagaaacggcgctcaggacggcaa
gtaaagcgtagaaaatataatgaggacctggacttcaaggtcgtggacgatgatggggaa
acaatcgctgttctgggagcaggccggacatctgcactctctgcttccaccctggcctgg
caggctgaggagcctccagaagatgatgcaaacatcattgagaaaatcctggcatccaag
actgtccaggaggttcacccaggagaacctccattcgacctagagcttttctacgttaag
tatagaaatttctcctatttacattgtaagtgggccacaatggaagagctggaaaaggat
ccccgcatcgctcagaagatcaagcgctttaggaacaaacaggcccagatgaagcatatt
tttactgagcctgatgaagacttgttcaatccagattatatagaaattgatcgtatcttg
gaggtggcccacaccaaggatgcagaaacaggggaggaagtgacccattacctggtaaaa
tggtgctctctgccgtatgaagaaagcacatgggagctagaggaagatgtggatcctgca
aaagtgaaagaatttgaatctctacaaattctccctgaagttaagcctgtggaacgacct
gcctctgatgcatggcagaaactggagacctctcgtgagtataagaacagtaaccggctg
cgggagtaccagctcgagggcatgaactggctgcttttcaactggtacaacagaaaaaac
tgtattttggctgatgaaatgggcctagggaaaaccatccagtccatcgcattcctttca
gaaatctttgtcaggggaatccatggcccctttctcatcattgcccctctttccaccatc
actaactgggagcgagaattccggacatggacagagatgaatgctattgtgtaccacggc
agccagatcagcaggcagatgatccagcagtacgaaatggtatacagagatgcacagggg
aaccccctttcaggagttttcaagttccatgtcgtcatcacaacattcgagatgatcctg
gcagattgcccagagctgaagaagattcactggagctgtgtggtaattgatgaggcccac
agattgaagaataggaactgtaaacttctggaagggttaaagctcatggccctggaacac
aaggtgctactcacaggaacgcccttgcagaactcagtggaagagctcttcagtttgctt
aactttctggagccctcacagtttccttcagagactgctttcttagaggagtttggtgat
ctcaaaacagaagaacaggtaaagaaattgcagtctatcctaaaaccaatgatgcttcgg
cgcctgaaagatgatgtggagaagaaccttgctcccaagcaggagaccatcattgaagta
gaactgaccaatatccagaaaaagtactaccgtgctatcctagagaaaaacttctccttc
ctgaccaaaggtgcaaatcagcacaacatgcccaaccttatcaatactatgatggagctg
agaaaatgctgcaaccacccctacctgatcaatggggcagaggaaaagattctggaagat
ttcaggaaagcccacagctctgaagcctctgacttccagctacaggccatgatccaggcg
gcggggaagctggtgctcattgacaagcttctccccaagctcattgctggcggccacaaa
gtgctcatcttctctcagatggtgcgctgtctcgacatcctggaggactatctcatccag
agacgatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggcagcc
atcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcaccagagcg
ggaggcctgggaatcaatctcacagctgctgatacctgcatcatatttgattctgactgg
aacccacaaaatgacttgcaggctcaggcccggtgtcatcgtataggccagagcaaagcc
gtaaaggtatatcgcctaatcactcgaaactcctatgagcgggaaatgtttgacaaggcc
agcctgaagctgggcctggacaaggctattcttcaggacatcaacagaaagggcagcacc
aatggagtgcagcagctctcaaaaatggaagtagaagatttgctccggaaaggtgcttat
ggagctttaatggacgaggaggatgaaggctccaagttctgtgaagaggacatagaccag
attctgcagagacggacccacaccatcaccatccagtcagaagggaagggctccactttt
gccaaggctagttttgtggcttcaggaaacagaacagatatttccttggatgatcccaat
ttttggcagaaatgggctaaaatagctgagttagacactgaagcaaataatgaaaaggaa
agcttagtgattgaccggccacgggtgaggaaacagaccaaacactacaactcatttgag
gaggatgagcttatggagttctcagagttagacagtgactcggatgaaaggcccacacgg
tccaggcgcctcagtgacaaagccaggcgctacctccgcgctgagtgcttccgagtagag
aagaacctgctcacctttggctggggccgctggaaggacatcctgactcacggacgattc
aagtggcccctgaatgagaaggatatggaggtgatttgccgggctctgctagtatactgc
gtgaagcattacaaaggagatgagaaaatcaagagttttatttgggaactaatcacacct
tccaaagacggacaggttcagaccctccagaaccactcaggcttgtctgccccagtcccc
agagggaggaaaggaaaaaagacgaaaaaccagctgttgctcccagaactgaagactgca
gactggttggccacttgcaatcccgaggtggtcttacatgatgatgggtacaaaaaacac
ctcaagcagcactgtaacaaggtgcttttgagagtccggatgctgtactacctaaaagct
gaaatattaggagaagcagctgataaagcctttgagggaactcctgccagagagctggat
gtccttctgcccgacattgactatgtggagatcccagtagattggtgggatgctgaagct
gataagtcccttctcattggtgtgttcaagcacggttatgagaggtacaatgccatgcgg
gctgacccagcactctgtttcctggagaaagtcggcatgcctgatgagaagtccctttct
gcagagcagggtgttacagatggaacctcagacattcctgaaagaggcaacatagataaa
gaagacagtgctgaggacaaggtagatggtctccagaagcaaacggcgagtcccagtgat
ggaagtgatggcatttttggtgaaaagaaggatgacagccaggcagtttcctctgccctc
actgctcgactaaggcgtctggtcactatttaccagcgctgcaaccgcaaggagctgtgc
agacctgaaatcctaggcccaggtaaccaaggatactgggttcaggaggaggtgttcagg
agaacttcagacatggacctcatcaacaaggaagcccaaaaaaggtggactagaagagaa
caagccgacttctatagaaccgtgtcttccttcggtgttgtgtatgaccaggaaaaggaa
gcctttgactggacgcagttccgcgccatttctcgcttggacaagaagtcagatgagaac
ctggagcactattttcatagttttgtagccatgtgtcggaatgtgtgtcgtcttcccaca
tggaaagatgatggtccccctgatgccagcatctatgttgagcccatcaccgaggaacgg
gcagcaaagactctgtaccgcattgaactactgaggaaagtccgtgagcaggtgctcacg
tgtcctcaactgcatgagcgcctccagctttgcagacccagcctctacctcccagtctgg
tgggaatgtgggaaacatgatcgagacctgcttattggcaccgccaaacatgggctcaac
cgcactgactattacatcatgaatgacccccagctgtccttcctagatgcctatagaaac
tatgcccaacacaaaagaactgacacccaggctcctggaagtctctgttgcctttaccag
ggcaattctaaactatatgagtctcttacttatacgccaatgagtaggacttcagagtct
cttgaaagtgagccagagaatctggtaaaaatggacagcagggacgatcatctctgcctg
cctgaggctggtctgcctgacataacctgtgaaaactttgtttccaaagttcaggaagtc
atttctctggaccatgatgaaagcttgctgccggagtctttggagaacatgatgtatggc
aagacaggactcagccaggagccacgatcttttcaggaggccccaagtaccaacatgcag
tccaggaaaaagactgtcaccgtctcagccagcagagacgagagctgccagcttcctggt
attgaggcagaaattacttcagcttcctctctcatgagcagcttagaagcaggagtggcc
aagatgaatattaaaaatggaaagcatttgttggtatcgatctcagaagaaggggagccc
tgctgcagcgagacagggcggagccctgaaagcagaggccgcctggaggccagatgctta
gcttcccctaccttagatacagggcacgaaagtgggtttgtagatctgtgcagccttagt
gtctatgactccaaaagaaacttctcatcagatcagcaattaattgatttattagaaaac
aagagtttagaaaataagttgattttgaatcagagtgatgaggaagaggaagaaaatgag
aaggaaaccttagccatagtagccagcaccacagaaaagccagcggtcttagatttcacc
cagcccactgcaagcatcccaaggggaaagaacctcagcttccaccaagatgaagccaag
aaaggaaggctggaggtgggaagcaagactcctggaccacagagggcctttcctccctca
gccaatcagtgccactgcaaacacattgaaaggtgggcacatggcctggggagtgaggaa
tctgaaggagagaaacccaaggcttacgagccagacccgtacagaagcaaagccaataat
accacagtggaaggtgagcctgctattattccaacagagccatttaaactgaagcatgag
cttttaaaagaaccgtggaaagaaagttcagagggggggaagagtttctccatgtatgtt
cccgagggaagtgaacccaaatcagaagaaatggattttgagaataaagatgattatgag
aaggatggagcctgccacagtcaagactacccaggcaaatactctgaggaggagagtaag
agttcggcatcaggcattgcaggagaccttggggaagaggcacaggaagtgcgggctccc
accattgctcagctcctgcaggaaaaaaccctctattccttctcagagtggccaaaggac
cgtgtgataattaaccgcctagataatatttgccatgtggtgttaaaggggaagtggccc
tgcagccaccagtatgagccctcaggtgcactgcccacgccagtgttatccagcagtgca
ggttctcgaagcagcctctcagagccagaagcaaccgaacacagcttcagcaatggtgca
gcattggcagcccagatccaaaaggagagcttcttagccccagtattcacaaaagatgaa
caaaagcacagacgtccctatgagtttgaggtggaaagggatgccaaagctcggagccta
gaagaatactctgccagccatgggcgtccccccattgtcctcaatggctggcatggggag
tcagctatagacctctcctgctcatcagaggggtctccaggagccacatctcctttccca
gtaagtgccagcacccctaagattggtgctatcagctcacttcaaggagccctcggtatg
gacttgtctggaattctgcaagctggcctaatccacccagtaactggacagatcgtcaat
ggaagcctcaggagggatgatgctgccatgagaaggcgaagagggagacgaaaacatatt
gaaggagggatggacctcatctttctgaaggagcaaacacttcaggctggaatcttggaa
gtccatgaagatgcaggacagactaccctgaacaccacacaccctgaagggccaggagct
gcttcctcagcttctgagccaacagcagcagccagcagccaggctgagaaagctgttccc
agcaagagcctacttgactggctgcggcagcaggctgactactccttggatgttcctggc
tttggggcaagtttttcagacaaacccaagcagaggagaccacgctgcaaagaacctgga
aaattagacatcggctctctaggtggagaagagagggtttctgctgtccccaaggagcca
ggactaagggggtttctcccagaaagcaaattcaatcacaccctagccgaacctgtgctt
cgagatgcaggcccccgcaggagggggaggcggcctcggaatgagctcctaaaagctcca
gccattgtagcagactctccttctggaatgggaccactgttcatgaatgggctgattgca
gggatggacctggtaggattgcagaatgtgagaaatattccaggcattcctctcactggg
ctggtgggcttcccagctggttttgccaccatgcctactggtgaagacgtcaaaaacacc
ctgagcatgctgcccatgatgctgccaggcatggccacagtgccccagatgtttggtgtt
ggcggactcctcaacacacccatggcaaccacctgcacgaccactgcatcagcgtctctc
gcaagcacaaaaagtggtgcctcagccactgaaaaaactacagaggacgagctgagtggc
cgtgatgtgaaagcagacagtctggtcgaagataagcctggccctagtccattttctgat
cagtctgaacccacaataactacaagtagtcctgtggctttcaacccatttctcatccca
ggagtatctcctggactcatctacccctccatgtttctctcccctggcatgggcatggct
ctgccagccatgcagcagggtagacactcagagatggccggtctagagacccagaagagg
aaaaagaagaaaacaaagggggacaaccccaccccagagcctgcttctgtgtgtgagagg
gagccaggcagtgatcagaactgcaccgagtccagtgtcactgtgtccccagagagagaa
cacgtggcacaggccagggaagaggggctcaaagactctaacgatgataccaattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (25)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (23)   
DNA sequence (29)   
   RefSeq(nuc) (25)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (70)   

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