KEGG   Rattus norvegicus (rat): 311670
Entry
311670            CDS       T01003                                 
Symbol
Cstf1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    311670 (Cstf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    311670 (Cstf1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     311670 (Cstf1)
SSDB
Motif
Pfam: WD40 CSTF1_dimer ANAPC4_WD40 NBCH_WD40 Ge1_WD40 PROPPIN Frtz
Other DBs
NCBI-GeneID: 311670
NCBI-ProteinID: NP_001013179
RGD: 1309267
Ensembl: ENSRNOG00000004775
UniProt: Q5BJQ6 A6KKX0
Position
3:181562953..181574727
AA seq 431 aa
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTF
EKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAV
FNHTEDYILLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRSTTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtacagaaccaaagtgggcctgaaggaccgccagcagctctacaagctgatcatcagc
cagctgctctatgacggatacattagcatcgccaatggcctcatcaacgagatcaagcca
cagtcggtgtgtgcgccctcggagcagctcctgcacctcatcaagctagggatggagaac
gatgacactgcagttcagtatgccattggtcgctctgacacggttgcccctggcacaggg
attgacctggagtttgatgcagacgtccaaacaatgtcacccgaggcttcggagtatgaa
acctgttatgtcacctcccacaaaggcccatgccgagtggccacctacagcagagatggg
cagttgatagccacagggtctgcggatgcttccatcaagatactggacacagagaggatg
ctggccaagagcgccatgcccatcgaggtcatgatgaatgagactgcacaacagaacatg
gagaaccacccagtgatccgaactctttacgaccatgtggatgaagtcacgtgtctcgct
tttcacccaacagaacagatcctggcctccggctcaagggattatactctaaaattgttt
gattattccaaaccctctgcaaaaagagcctttaaatacattcaggaagctgagatgctg
cgctccatctcgttccacccttctggagacttcatcctggtcgggacccagcatcccacg
cttcgcctctatgacatcaacaccttccagtgtttcgtctcctgcaatccccaagaccag
cacaccgacgccatctgctctgtcaactataaccctagtgccaacatgtacgtcactggc
agcaaggacggctgcatcaagctgtgggacggcgtctccaatcgctgcatcacaaccttt
gagaaagctcacgacggggcagaagtctgttctgccattttctccaagaattccaagtac
atcctctcaagtggaaaagactctgtagctaaactctgggaaatatccacgggacggaca
ctggtgaggtacacaggcgcagggctgagtggacggcaagtgcaccggacacaggctgtg
ttcaaccacactgaggactatattttgctgccggacgaaaggaccatcagcctgtgctgc
tgggactctaggacagctgagcgcaggaacctgctgtccctgggccacaacaacattgtg
cgctgcatagtgcactccccgaccaaccctggcttcatgacgtgcagcgacgacttccga
gctcggttctggtaccggaggtccaccactgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (39)   

Download RDF
DBGET integrated database retrieval system