KEGG   Rattus norvegicus (rat): 311802
Entry
311802            CDS       T01003                                 
Symbol
Ssna1
Name
(RefSeq) microtubule nucleation factor SSNA1
  KO
K16780  sjoegren syndrome nuclear autoantigen 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    311802 (Ssna1)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    311802 (Ssna1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    311802 (Ssna1)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   311802 (Ssna1)
SSDB
Motif
Pfam: APG6_N Bacillus_HBL PDC10_C CC149 TMCO5 DUF5917 DUF3086 Med11 DUF724 GAS Prominin ATG17_like ADIP Golgin_A5 HALZ DUF4200 Herpes_UL6 ERM_helical HAUS4 Flagellar_rod DUF1664 UPF0242 Rootletin Mis12 ATAD3_N Seryl_tRNA_N DUF3993 DUF3450 PRD ZYG-11_interact UPF0227 Jnk-SapK_ap_N FapA ZapB Baculo_PEP_C TMPIT PhoU DUF948 GrpE Radial_spoke_3 V_ATPase_I
Other DBs
NCBI-GeneID: 311802
NCBI-ProteinID: NP_001290546
RGD: 1310259
Ensembl: ENSRNOG00000011093
UniProt: A0A9K3Y6S6 B2RZ20
Position
3:complement(28483107..28484571)
AA seq 119 aa
MTQQGAALQNYNNELVKCIEELCQKREELCRQIQQEEDEKQRLQNEVRQLTEKLARVNEN
LARKIASRNEFDRTIAETEAAYLKILESSQTLLSVLKREAGNLTKATASDQKSSGGKDS
NT seq 360 nt   +upstreamnt  +downstreamnt
atgacccaacagggcgcggcgctgcagaactacaacaacgagttggtcaagtgcatcgaa
gagttgtgtcagaaacgagaggagctgtgccggcagatccagcaggaggaggacgaaaag
cagcggctacagaatgaggtgaggcagctcacggagaaattggcccgcgtcaacgagaac
ctggcgcgcaagatcgcctctcgcaacgagtttgaccggaccattgcggagacagaggcc
gcctacctcaagatcctggagagctctcagactctgcttagtgtactcaaaagagaagct
gggaacctgactaaagccacggcttcagaccagaagagtagtggaggcaaagacagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (41)   
   Pfam (41)   
All databases (65)   

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