KEGG   Rattus norvegicus (rat): 311835
Entry
311835            CDS       T01003                                 
Symbol
Ddx31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
  KO
K14806  ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    311835 (Ddx31)
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    311835 (Ddx31)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     311835 (Ddx31)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    311835 (Ddx31)
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII ERCC3_RAD25_C Helicase_C_2
Other DBs
NCBI-GeneID: 311835
NCBI-ProteinID: NP_001101294
RGD: 1304895
Ensembl: ENSRNOG00000013040
UniProt: B1H297
Position
3:32570725..32635446
AA seq 682 aa
MRRQTEATKRKHQVSSDAPPAKRRNEISSLSAKKASNKETQRAFKGSAHKTFPPKKHLDT
IGNERQEEKPCVKTSSLFKNNPEIPELHRTVVKQAREQVFSPEAFQELDLHPHLISTINT
VLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPY
ALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRL
VDHIKSTKNIHFNRVRWLVVDEADRILDLGFEKDVTVILNAVNAECQKRQNVLLSATLTE
GVTRLADISLHNPVSISVLDKSWDQPNPKEVASIQLDSFAIPESLDQYVVLVPSKLRLVC
LAAFILKKCKFEKDQKMIVFFSSCELVEFHYNLFLHTLLCHSGTPASETLPSASWPLKFL
RLHGNMKQEERTSVFHEFSHSGTGVLLCTDVASRGLDLPQVTWIVQYSAPSAPAEYIHRI
GRTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKLEGILAVLAKDDCFKRRQRGAQ
RSHATGPQEIRERATVLQTVFEDYVHSSQRMVSWAKKALQSFIRAYATYPKELKSIFHVR
SLHLGHVAKSFGLRDAPRNLGVSAVRKASFKRPDPRRKTQRKHHLVPAEVLHSEHSSGLE
GNGPKGRKQGLRVAPSKPGLRR
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgaggcggcaaacagaggctaccaagagaaagcaccaagtgtccagcgatgctccacca
gcaaaacggaggaatgaaatatcctctctttcagccaagaaagccagcaataaagaaact
cagagagcatttaaagggagcgcacacaaaacatttcctccaaagaagcatttggacact
ataggcaatgaaaggcaagaggagaagccgtgtgttaagacttcgtcgctgtttaaaaac
aatcccgagatcccagaactccacagaacagtagtgaagcaggctcgagagcaagtgttc
tctccagaagctttccaggagctggacctccacccacatctaatttccacaataaataca
gttttaaaaatgtccagtatgaccagtgtccagaagcagagtatcccagtgctgctggaa
ggcagagatgcccttgtgcgctcgcagacgggctcaggtaaaactcttgcctattgcatc
cctgtggtccagtctcttcaagcactgacatcaaaaatacagcgtagtgatggcccctat
gctttggtcctagtgcccaccagagagttggctctgcaaagctttgacactgttcagaag
ctacttaagccatttacctggattgttcctggagtgttgatgggcggagagaagaggaaa
tcagaaaaggccagactccgcaaaggcataaatatccttatctcaactcctggccggtta
gtggatcatataaaatccacaaagaacattcactttaaccgagtacggtggctggttgtg
gatgaagcagacaggatcttggatttgggctttgagaaggatgtcaccgtgattctgaat
gctgtaaatgctgagtgtcagaagcggcagaatgtcctcctgtcagcgacactcacggaa
ggtgtaactcggctggctgatatcagtttgcacaatccagtcagtatctctgtcctggac
aaaagttgggaccagcccaatcctaaggaagttgctagtatccagctggacagctttgcc
ataccagagagtctcgaccagtatgtggtgttggttcccagcaagctgcgccttgtctgc
cttgcagccttcatcctgaagaagtgcaagtttgagaaggaccagaagatgattgtcttt
ttctcaagttgtgagctggtagagttccactacaacctcttccttcacaccctgctttgc
cactccgggacccctgcttcagagacgctgccatctgcctcctggccactgaaattcctt
cggctgcatggcaacatgaagcaggaggaaagaacttctgtgtttcatgagttctcacat
tctggaactggagtcctactctgcacagatgttgcatctcgaggcttggatctcccacaa
gtcacctggattgttcagtacagtgctccgtctgcacctgcagagtacattcaccgcatt
ggaaggactgcccggatcggctgtcatgggagcagcctgctcattttggctccttcggag
gcagagtatgtcaactcgttggcttctcacaaaatcaatgtctctgagattaagctggaa
ggtattttggctgtcctggcaaaggatgattgttttaaaaggagacaaaggggagcccag
agatcccatgccactggcccccaggaaatccgagagcgagccacggtgttgcagacagtg
tttgaagattatgtgcactccagtcagaggatggtctcctgggcaaagaaagccctgcag
tccttcatccgagcctatgccacctaccccaaggagctgaagtctatcttccatgtccgg
tccctacaccttggccatgtggctaagagtttcggactaagagatgctcctagaaacctc
ggtgtctctgctgtgagaaaggcaagctttaaaaggcctgaccctcggaggaagacccag
aggaagcaccaccttgtgcctgctgaagtcctgcactcggaacactccagtgggctggag
ggcaatggcccgaagggcagaaagcaaggccttcgggtggcacccagcaagcctgggcta
cggagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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