KEGG   Rattus norvegicus (rat): 311880
Entry
311880            CDS       T01003                                 
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: RasGAP VPS9 DUF5601 DUF5740
Other DBs
NCBI-GeneID: 311880
NCBI-ProteinID: XP_006234089
RGD: 1307479
Ensembl: ENSRNOG00000017925
UniProt: A0A8I5ZT12
Position
3:complement(38365854..38439403)
AA seq 1484 aa
MVKLDIHTLAHHLKQERLYVSSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPAQQEKLFGEKGS
DRFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGTEEGD
PRTKNSLGKFDKGCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYISYSQLITLVNF
MKSVMSGDQLKEDRMALDNLLANLPQAKPGKSSSLDMTPYSTPQMSPATTPANKKNRLPI
GQQLAAITAWDSSATNLTAHIPLVTPFATRSRSRSNMLMDLHMDHEGSSQETIQEVQPEE
VLVISLGTGPQLTPGMMSENEVLNMQLSDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNVDEDRLQEIAGAAAENVLGSLLCLPG
SGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDV
REVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDVDDIAHGAHQ
LTSPPSQSESLLAMFDPLSSHEGASAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPN
FGSHVLTAAEMEAFRQRHSYPERLVRSRSSDIVSCVRRPMSDPSWNRRPGNEELPPAAAT
GATSLVAAPHSSSSSPSKDSSRGETEERKDSDDERSDRSRPWWRKRFVSAMPKAPIPFRK
KEKQEKDKDDLGPDRFSTLTDEPSPRLSAQAQVAEDILDKYRNAIKRTSPSEGALANDES
TEVMGDGESAHDSPREELQNMSADDLPDSASQAAHPQDSALSYRDVKKKLRLALCSADSV
AFPMLTHSTRNGLPEHTDPEDNEIVCFLKVQIAEAINLQDKSLMAQLQETMRCVCRFDNR
TCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCV
RLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQ
LAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPW
PSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKAN
PPCLLSTVQYISSFYASCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq 4455 nt   +upstreamnt  +downstreamnt
atggtgaagctagatattcacacattggcccaccacctcaagcaggagcgcttatatgtg
agctctgagaaacagctcattcagaggctaaatgcagatgtgctgaagacagccgagaag
ctgtatcggacagcgtggattgcaaagcagcagaggattaatttggatcgtctcattata
accagcgctgaagcttcccctgctgagtgttgccagcatgctaagattttggaagacaca
cagtttgttgatggatataagcaactgggatttcaggaaacagcctatggagaattcctg
agtcggttaagagagaatccgcgtcttattgcctcctctttggttgctggagaaaaactc
aatcaggagaacacacaaagtgttatctacactgtttttacctccttgtatggcaactgt
attatgcaagaagatgaaagctacctccttcaggttttacgatacttgattgaattcgaa
cttaaagaaagtgacaaccccaggcgccttttgaggagaggaacctgtgccttcagcatc
ttatttaaacttttttctgaaggactgttttctgccaaacttttccttacggctacttta
catgagccaatcatgcagctccttgtagaagatgaggaccacctggagacagatccaaac
aagctaatcgagaggttctctccagcccagcaggaaaaactctttggagagaaaggctca
gatagatttaggcaaaaggttcaagaaatggtagattccaatgaggctaaactagtggct
ttggtgaacaaatttattggttaccttaagcaaaatacgtactgctttccacatagtttg
aggtggattgtatcacagatgtacaaaactctttcttgtgtagacagattggaggttggg
gaggtcagagcaatgtgtacggatcttctgttggcttgcttcatttgtcccgcagttgtc
aatccagaacagtatggaataatatctgatgctcctattaatgaggtggcaagatttaac
ctgatgcaggttggccgccttttgcagcagttagcaatgactggcactgaggaaggagat
ccccggaccaaaaatagccttgggaaatttgacaaaggctgtgtcgctgctttccttgat
gtcgtaatcggaggccgtgcagtagagactccaccaatgtcctctgttaatcttctggaa
ggcttgagcagaactgtggtgtatataagctacagtcagcttattactctggtaaatttt
atgaagagtgtgatgtctggagatcaactgaaagaagatagaatggctcttgacaatttg
ttggcaaacttgccccaggctaagcccgggaagagcagcagtctagacatgactccctac
agcactcctcagatgtctccagcaaccactccagccaataaaaagaatcggctacctata
ggacaacagttagcagccatcactgcctgggattcttcagccaccaatcttaccgctcac
attcctctagtaaccccgtttgcaactcggagccgaagccgaagtaatatgctaatggac
ctacatatggatcatgaagggtcatctcaagaaaccatccaggaggtgcagccagaagag
gtgctggtcatttccttagggacaggtcctcagctcactccagggatgatgtcagaaaat
gaggttctaaacatgcagctttcggacggaggacaaggagatgtccctgttgatgaaaac
aaactccacggtaaacctgataaaaccttgcgcttttccctgtgcagtgataatctggaa
ggcatatctgaaggtccttccaatcgctctaattcagtgtcttctctcgacctggaagga
gagtctgtatctgaacttggggcaggaccttctgggagtaatggagttgaagcactgcaa
ctgttagaacacgagcaagctacaacacaagataatcttgatgataaactgaggaagttt
gagattcgggatatgatgggactaacagatgacagggacatatccgagacagtgagtgag
acctggagcaccgatgtcctaggaagtgacttcgacccaaacgttgatgaagaccgtttg
caggagattgcaggtgcagcagcagagaatgtgctgggcagcttgctgtgccttccaggt
tccggctcagttctccttgacccttgcactggctcgaccatatcagagaccacaagtgaa
gcttggagtgtagaggtgttgcccagtgactcagaggctccagacttaaagcaggaagag
cgcctccaagagctggagagctgttctggactgggcagtacatctgatgatacggatgtc
agggaggtcagttcccgccccagcacaccaggcctcagtgttgtgtccggcataagcgct
acatcggaggatattcccaataagatcgaagacctgcgatctgagtgcagctctgatttt
gggggtaaagattctgtaactagtccagatgtggatgacatagcccatggcgcccaccag
ctgacctctcctccctctcagtcagagtctctgcttgccatgtttgacccactgtcttca
catgaaggggcctctgctgtggtaaggccgaaggttcactatgcccggccctcgcatcca
cctccagatcctccaatcctggaaggtgcagtgggaggaaatgaagccaggctgcccaac
ttcggttctcacgttttaactgcagctgaaatggaggcgttcaggcagaggcactcttac
cctgagagactagtgcgcagcagaagctctgatatagtgtcttgtgtgcggcggcccatg
agtgaccccagctggaaccgacgtccagggaatgaagaacttccaccagctgcagccact
ggtgctacttctttggtggctgcacctcactcgtcatcttcgtccccgagtaaggactct
tcaagaggagagactgaggagcgcaaggacagtgacgatgagaggtcagacaggagcagg
ccttggtggagaaagcgttttgtatcagctatgcctaaagctcctataccatttagaaag
aaagaaaaacaagaaaaagacaaagatgatctggggcctgacagattctcaacactcaca
gacgagcccagccctaggctcagtgcacaagctcaggttgcggaagacattctggacaaa
taccgaaatgccattaaacggaccagccccagtgaaggagcactggcaaatgatgagagt
acagaggtcatgggtgatggtgaaagtgctcacgattctcctcgtgaggagctgcagaac
atgtcagctgacgacctcccagactctgcgagccaagcagctcaccctcaggactctgcc
ctctcttacagagatgtgaaaaagaagctgaggctcgcactttgctctgcagactctgtg
gccttccccatgctgactcattcaacaaggaacggactgccagagcacacagacccggaa
gataatgaaattgtgtgcttcttaaaagttcaaatagctgaagcaattaacttacaagat
aagagcttaatggctcagcttcaagaaacaatgcgctgtgtctgccgctttgacaatagg
acttgtaggaagttgctggcatccattgctgaagactacagaaaaagagctccgtatatt
gcgtatctcacccgctgtcggcaaggactgcagaccacacaggctcacctcgaaagactc
ttgcaaagagttttgcgggacaaagaggtggccaatcggtattttaccaccgtctgtgtg
cggttactgcttgagagcaaagaaaagaagatcagggagttcattcaagactttcagaaa
cttacggctgctgatgataagacggctcaagtggaggatttcctacagttcctgtatggt
gcgatggcgcaggatgtcatatggcagaatgccagcgaggagcagctgcaggatgcccag
ctggccatcgagcggagcgtgatgaatcggatcttcaagcttgctttctaccctaaccag
gatggggacatactgcgtgaccaggttctgcatgaacacatccagagattatctaaagta
gtgactgcaaaccacagagctctgcagatcccagaggtctatcttcgtgaggcaccgtgg
ccatctgcacagtcagaaatcaggactattagtgcttacaagacgccccgggacaaagtg
cagtgcatcctgagaatgtgctccactatcatgaacctcctgagtctggccaatgaggac
tctgtccccggggcagatgactttgtccccgtgttggtgtttgtgttgataaaggcaaac
ccaccctgcctgctgtccaccgtgcagtacatcagcagcttctatgccagctgtctgtct
ggagaggagtcctactggtggatgcagttcactgcggccgtggagtttattaaaaccatc
gatgacagaaagtga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (44)   

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