KEGG   Rattus norvegicus (rat): 312365
Entry
312365            CDS       T01003                                 
Symbol
Mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
  KO
K22647  ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:3.4.19.12]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    312365 (Mindy4)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     312365 (Mindy4)
Ubiquitin system [BR:rno04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   MINDY
    312365 (Mindy4)
SSDB
Motif
Pfam: MINDY-3_4_CD PDGF_N
Other DBs
NCBI-GeneID: 312365
NCBI-ProteinID: XP_038964608
RGD: 1562590
Ensembl: ENSRNOG00000011530
Position
4:85689049..85797553
AA seq 824 aa
MDSLYVEEVAASLVREFLSRKGLNKTFMTMDQERPRCELSINSRNDLRRVLHLEFLYKEN
KTKEKPLKTNLELITRYFLDHFGNTDSTESQEAPIPAIPIPKKNSKLPLRYPEATLVNIY
DLSDEDTGRRTSWSETGKARHDNLDGDIFGNFMSSKKNPYKSKPAHMVLGDSLPLVPAWE
KVDQLHSSEPGIDMKRTVERTRPKSGLIVRGMMAGPVASSSQDSFRKRSLRRSSTLSRKL
QAPEESQQQSEPFVHTPVCPGPQEVSASSSDSFSRSPLGQLNELSIEKPNATPSSQGPCQ
RDRPRLRSISEDSPLGYSHTEIITTPLRLDLPDGNSRMPQERLERAFKRQGGQPPSLRFK
VMETSLLSQTLIPSLEGKSGKLCAKKCHFHQVFMPLGRWRRRSGVLTRGKVSWCLTGRVI
SQTPCSWVGEAHPAGLRLHMWLSPEDVEDELIKEDIVLFPPPSMLKLLTVSKPIDLSLAK
EIKTLLFGSTFCCFSEEWKLQNFSFNDIASLKYGIVQNKGGPCGVLAAVQGCVLQKLLFE
GDNRINSNLQLQPSDAQRTRCLALAIADILWRAGGKEQAVVALASGTPHFSPTGKYKADG
VLETLTLYSLTSSEDLVTFLQQSVHQFEAGPYGCILLTLSAILSRSLELVRQDFDVPTSH
LIGAHGYCTQELVNLLLTGRAVSNVFNDVVELDSGDGNITLLRGIEARSDIGFLSLFEHY
NVCQVGCFLKTPRFPIWVVCSESHFSILFSLQPELLCDWKSERLFDLYYYDGLANQQEEI
RLTVDTTKTAPEDNCSDLVPPLELCIRTKWKGASVNWNGSDPIL
NT seq 2475 nt   +upstreamnt  +downstreamnt
atggacagtctgtacgtggaggaggtggccgcctccctggtcagggagtttcttagcaga
aagggtttgaacaagacgttcatgaccatggatcaggagcgcccccgctgtgagctgagc
atcaacagcaggaatgacctccgcagagttctacatctggagtttctctacaaggagaac
aagacaaaagaaaagcctctgaaaacaaacctggaactcattaccagatactttctggat
cattttggaaatacagacagcactgaaagtcaggaagccccgatccctgcaatccctatt
ccaaagaaaaacagcaaattgcctttgcgatacccagaggccacactggtgaatatatat
gacctttcagatgaagacacaggaagacggacatcatggtcagagacaggcaaagccagg
catgacaatctggatggggacatatttggtaatttcatgtcttcaaaaaaaaacccatac
aaaagtaagcctgcgcacatggtcctgggtgacagcctccctttggttcctgcgtgggag
aaggtggaccagcttcactcatcagagcctggcatagatatgaagaggacagtggagagg
accaggccgaagtctggcctgattgtccgaggcatgatggctgggcctgtcgccagctcc
tcgcaggactctttccgcaaacgctctctgcgacggtcctcgactttgagcaggaagctc
caagccccagaggagagccagcagcagtccgagccatttgttcacaccccagtctgtcca
ggaccacaggaggtctctgcttctagcagtgactccttctccaggagtcctctgggtcag
ctgaatgaactgtctatagagaagccaaatgctactcctagcagccaagggccgtgccag
agggacaggcccaggctaagaagtatttcagaggacagcccactggggtacagccacaca
gaaatcatcacgacacctttgaggctggacttgcctgacgggaattccaggatgccccag
gaacggctagaaagagcattcaagcggcaaggcggccagcccccgtctctcaggttcaag
gttatggagacatccttgctgtcccagactctcataccatccttggaaggcaagtctggg
aagctttgtgctaagaagtgccatttccatcaagtcttcatgcccctggggaggtggaga
aggaggagtggagtcctcactagaggaaaagtcagttggtgtctgacaggacgggtgata
agccagacgccctgcagctgggtaggtgaggctcatccggctgggctgcgtctgcatatg
tggctctctccagaggatgttgaagatgaactgataaaggaagacattgtcctgttccca
cctccgtcaatgctcaagcttctaactgtgtccaagccaattgacctctctctggctaag
gagataaagacccttctgttcggctctaccttttgctgcttcagtgaagaatggaaactc
cagaacttttccttcaatgacattgcctcgttaaaatacggcattgtgcagaacaagggt
ggtccctgtggggttctggcagcagttcaaggctgtgtgcttcagaaactcctgtttgaa
ggagataacagaatcaactctaatctccagctgcagccctcagatgcccagaggactcgc
tgccttgccctggccattgcagacatcctgtggcgagctggaggcaaagagcaagccgtg
gttgcactggcttcaggaacaccgcacttcagtccaacagggaaatacaaagcagacgga
gtcttagaaacactcacactgtatagtttgaccagctctgaggacctggtgacttttctc
cagcagagcgttcatcagttcgaagcgggaccctacggttgcatcctgctcaccttgtct
gccatcttgtccagatccctagagcttgtccgccaggactttgatgtccccaccagccat
ctcattggagctcacggatactgcacacaggaacttgtcaatcttctcctgaccgggaga
gccgtgtctaatgttttcaatgatgtagtggagctggactcgggcgatgggaacatcacg
cttctccgaggcattgaggcacgcagtgacatcggtttcttatctctctttgaacactac
aatgtgtgccaggttggctgcttcctgaagaccccaaggttccccatctgggtggtctgc
agtgagagccacttcagcatcctcttcagcctacagccagagctcttgtgcgactggaag
tctgagcggctctttgacctgtattattatgatggcttggccaaccagcaggaggagata
cggctgactgttgataccaccaagactgccccagaggacaactgcagtgaccttgtccct
cctcttgagctctgtatcagaaccaagtggaagggggcatctgtgaactggaatggctca
gaccccatcctgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (39)   

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