KEGG   Rattus norvegicus (rat): 312371
Entry
312371            CDS       T01003                                 
Symbol
Avl9
Name
(RefSeq) late secretory pathway protein AVL9 homolog
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: Avl9 DENND11 Afi1 SPA DENN Condensin2nSMC
Other DBs
NCBI-GeneID: 312371
NCBI-ProteinID: NP_001414213
RGD: 1564615
Ensembl: ENSRNOG00000013314
Position
4:87291062..87338537
AA seq 649 aa
MEKAGRESDGAPCGPVLHIVVVGFHHKKGCQVEFSYPPLIPGDGHDSHAVPEEWKYLPSL
ALPDGAHNYQEDTVFFHLPPRNGNGATVYGISCYRQIEAKALKVRQADITRETVQKSVCV
LSKLPLYGLLQAKLQLITHAYFEEKDFSQISILKELYEHMNSSLGGASLEGSQVYLGLSP
RDLVLHFRHKVLILFKLILLEKKVLFYISPVNRLVGALMTVLSLFPGMIEHGLSDCSQYR
PRKSMSEDAGLQEGNPSADDFISESTSDNLNTSLGIVTRIVAVNHGEDAVPPTEKPYFQV
EGNNNKGQEHSDTGRYLELPPRPSPESSESDWETLDPSVLEDASLKEREQMGSDQTHLFQ
KDSVPSDSPPITVQPQANTRQVVLIPGLISGLEEDQYGMPLAIFTKGYLCLPYMALQQHH
LLSDVTVRGFVAGATNILFRQQKHLSDAIVEVEEALIQIHDPELRKLLNPTTADLRFADY
LVRHVTENRDDVFLDGTGWEGGDEWIRAQFAVYIHALLAATLQLDNEKMLSDYGTTFVAA
WKNTHNYRVWNSNKHPALAEINPNHPFQGQYSVSDMKLRFSHSVQNSERGKKIGNVMVTT
SRNVVQTGKAVGQSVGGAFSSAKTAMSSWLSTFTTSTPQSLPEPPNGKP
NT seq 1950 nt   +upstreamnt  +downstreamnt
atggagaaggctgggcgtgaaagtgacggcgccccctgcgggcctgtcctgcatatcgtg
gtggtcggctttcaccacaagaagggctgccaggttgagttctcttacccaccactaatt
ccaggagatggccatgacagccacgctgtacctgaagagtggaagtacctgccttccctt
gccttaccagatggtgcacataactatcaggaagatactgtgttttttcacttgccaccc
agaaatggaaatggagccacagtatatggtatctcttgttatcgacaaattgaagccaag
gcattaaaagtaaggcaagccgacatcaccagagaaactgttcagaaaagtgtctgtgtt
ttaagcaagctgcctctttatggcttacttcaagcaaaacttcaacttattacacatgca
tattttgaagagaaagatttttcccaaatttccattctaaaggagctctatgagcatatg
aacagttccttgggaggggcctcattagaaggatcacaggtgtatcttggtctgtctcct
cgagatcttgtccttcattttcgacacaaggtcttgatcctgtttaagctaattcttctt
gaaaagaaggttctgttttacatttctccagtgaataggttggtgggtgcactaatgact
gtgctatccctttttccaggcatgattgagcatggtctcagtgactgttctcagtataga
ccccgaaagagtatgtctgaagatgctggacttcaggaaggtaatccctctgcagatgat
tttatttctgagtctacttctgacaacttaaataccagcttgggaattgtcacaagaatc
gtggcagtaaaccatggagaagatgctgttcctccgacggagaagccttacttccaggta
gaaggtaacaacaacaaaggacaagaacacagtgatactggccgatatttggaacttcca
cctcgaccatctccagagtcttcagaaagtgactgggaaactttggatcctagtgtctta
gaggatgccagcttaaaagaaagggagcagatgggctcagaccagacacacttattccaa
aaggactctgtgccctcagacagtcctccaatcacagtacaacctcaagctaataccaga
caggtggtcctgataccagggctcatttctggtttggaagaagaccaatatggcatgcct
ctggccatctttacaaagggatatctgtgtttgccttacatggcactgcagcagcatcat
cttctctccgatgtcactgttcggggatttgtggccggagctactaacatcctttttcga
caacagaagcacctcagtgatgccattgtggaagtagaagaagcactgatccagatccat
gatccagaacttaggaagctgcttaacccaacaactgcagacctaaggtttgcagattac
ctagtgaggcatgtgactgagaaccgggatgatgtcttcctggatggcacaggctgggag
ggaggtgatgaatggatccgggcccagtttgcggtctacatccacgctctgctggctgct
acactgcagttagataatgaaaagatgttatcagactatgggacaacttttgttgctgcc
tggaagaatactcacaactacagggtatggaacagcaataagcatccagcacttgcagag
ataaatccaaaccatccttttcaaggccagtactccgtgtcagacatgaaactcagattc
tcacattctgttcagaacagtgaacgtggcaaaaaaattggcaatgtcatggtcacaacc
agccggaatgtggtacaaacaggaaaagccgttggccagtcagttggaggagctttttcc
agtgcaaagacagctatgtcttcatggctatctactttcaccacatccacccctcagagt
cttcctgagccacccaacgggaagccctga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (12)   
   RefSeq(nuc) (10)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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