KEGG   Rattus norvegicus (rat): 312451
Entry
312451            CDS       T01003                                 
Symbol
Tcf7l1
Name
(RefSeq) transcription factor 7-like 1
  KO
K04490  transcription factor 7-like 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04310  Wnt signaling pathway
rno04390  Hippo signaling pathway
rno04520  Adherens junction
rno04916  Melanogenesis
rno04934  Cushing syndrome
rno04936  Alcoholic liver disease
rno05132  Salmonella infection
rno05165  Human papillomavirus infection
rno05167  Kaposi sarcoma-associated herpesvirus infection
rno05200  Pathways in cancer
rno05210  Colorectal cancer
rno05213  Endometrial cancer
rno05215  Prostate cancer
rno05216  Thyroid cancer
rno05217  Basal cell carcinoma
rno05221  Acute myeloid leukemia
rno05224  Breast cancer
rno05225  Hepatocellular carcinoma
rno05226  Gastric cancer
rno05412  Arrhythmogenic right ventricular cardiomyopathy
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    312451 (Tcf7l1)
   04390 Hippo signaling pathway
    312451 (Tcf7l1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    312451 (Tcf7l1)
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    312451 (Tcf7l1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    312451 (Tcf7l1)
  09162 Cancer: specific types
   05210 Colorectal cancer
    312451 (Tcf7l1)
   05225 Hepatocellular carcinoma
    312451 (Tcf7l1)
   05226 Gastric cancer
    312451 (Tcf7l1)
   05216 Thyroid cancer
    312451 (Tcf7l1)
   05221 Acute myeloid leukemia
    312451 (Tcf7l1)
   05217 Basal cell carcinoma
    312451 (Tcf7l1)
   05215 Prostate cancer
    312451 (Tcf7l1)
   05213 Endometrial cancer
    312451 (Tcf7l1)
   05224 Breast cancer
    312451 (Tcf7l1)
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    312451 (Tcf7l1)
   05165 Human papillomavirus infection
    312451 (Tcf7l1)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    312451 (Tcf7l1)
  09166 Cardiovascular disease
   05412 Arrhythmogenic right ventricular cardiomyopathy
    312451 (Tcf7l1)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    312451 (Tcf7l1)
   04934 Cushing syndrome
    312451 (Tcf7l1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    312451 (Tcf7l1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG TCF-1
    312451 (Tcf7l1)
SSDB
Motif
Pfam: CTNNB1_binding HMG_box HMG_box_2 DDAH_eukar DUF1525
Other DBs
NCBI-GeneID: 312451
NCBI-ProteinID: NP_001101335
RGD: 1311671
Ensembl: ENSRNOG00000014753
UniProt: A6IAD2
Position
4:complement(106238892..106404012)
AA seq 587 aa
MPQLGGGRGGGAGGGGGGSGAGATSGGDDLGANDELIPFQDEGGEEQEPSSDSASAQRDL
DEVKSSLVNESENQSSSSDSEAERRPQPARDAFQKPRDYFAEVRRPQDGAFFKGPAYPGY
PFLMIPDLSSPYLSNGPLSPGGARTYLQMKWPLLDVPSSATVKDTRSPSPAHLSNKVPVL
QHPHHLQHPLTPLITYSNDHFSPASPPTHLSPEIDPKTGIPRPPHPSELSPYYPLSPGAV
GQIPHPLGWLVPQQGQPMYSLPPGGFRHPYPALAMNASMSSLVSSRFSPHMVAPAHPGLP
TSGIPHPAIVSPIVKQEPAPPSLSPAVSAKSPVTVKKEEEKKPHVKKPLNAFMLYMKEMR
AKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKERQLHAQLYPTWSARDNYGK
KKKRKREKQLSQTQSQQQIQEAEGALVSKSKKPCIQYLPPEKPCDSPASSHGSTLDSPAT
PSAALASPAAPAATHSEQAQPLSLTTKPETRAQLALHSAAFLSAKATASNSSQMGSQPPL
LSRPLPLGSMPTALLTSPPSFPATLHAHQTLPVLQAQPLSLVTKSAH
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgccccagctcggtggtggccgcggtggcggcgccggcgggggaggcggtggctccgga
gccggggcaaccagtggaggggacgacctcggagcgaacgacgagctgatccccttccag
gacgaggggggcgaagagcaggagccgagcagcgacagcgcttcggcgcagagggatctg
gatgaggtcaagtcgtccctggtcaacgaatcggagaatcagagcagtagctcggactcc
gaggcggagaggcgcccgcagcccgcccgggacgctttccagaagccgcgcgactatttc
gccgaagtgagaaggccccaggacggcgctttctttaagggacctgcgtaccctgggtac
cccttcctgatgattccagacctgagcagcccatacctctccaatggacccctgtctcct
ggtggagcgcgcacctacctgcagatgaaatggcccctcctcgatgtcccctccagcgct
acagtcaaggacacaagatcaccatctccagcacacttgtccaacaaagtccctgttctt
cagcatcctcatcacctacagcacccgctgacccctctcatcacctacagcaacgaccac
ttctcccccgcgtcccctcccacacatctgtccccagagatcgacccaaagacaggtatc
ccccggccccctcacccatctgagctgtcaccgtattacccactgtctccaggagctgtt
ggacaaatcccccatcccctcggctggctcgtcccacagcaaggacagcccatgtactca
ctccctcctggtggtttccggcacccttaccctgcccttgccatgaatgcttcaatgtcc
agcctggtctcaagtcggttctccccacacatggtggctcctgcccatcctggtctgccc
acctcaggaatcccccaccctgccatcgtctcccccattgtgaagcaggagccagcgccc
cccagcctgagccctgcagtgagtgcgaaatcccccgttaccgtgaaaaaggaagaggag
aagaagcctcacgtgaaaaagcctctcaatgccttcatgttgtatatgaaggagatgagg
gcaaaggtggtggccgagtgtaccctgaaggaaagtgcagccattaaccaaatcctggga
agaaagtggcacaacctgtcaagagaagaacaggccaaatactatgaacttgcccggaaa
gaacggcagcttcacgcgcagctctacccaacctggtcagcccgggacaactatggtaag
aagaagaagaggaagagggaaaagcagctgtcacagacacagtctcagcagcaaatccag
gaggcagagggtgctctggtctctaagagcaagaagccatgcattcagtacctgccccct
gagaagccttgtgatagccctgcgtcttcccatggcagcacgttggactcccctgcgact
ccctccgcagccctggcgtcaccagctgcccctgcggctactcactccgagcaagcccag
cccctgtcactcaccaccaaaccggagacccgggcccagctggctctccactcagctgcc
ttcctgtcagctaaggccacagccagcaactccagccagatgggcagccagcccccactc
ctatccaggcccttgcccttgggctctatgcccaccgctctgctgacctctcccccttct
ttcccagccacgctccatgcccaccagaccctccccgtgctacaggcccagcctctttcc
ttggtcaccaagtctgcccactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (20)   
   KEGG PATHWAY (20)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (43)   

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