KEGG   Rattus norvegicus (rat): 312652
Entry
312652            CDS       T01003                                 
Symbol
Plxnd1
Name
(RefSeq) plexin-D1
  KO
K06822  plexin D
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09190 Not Included in Pathway or Brite
  09193 Unclassified: signaling and cellular processes
   99995 Signaling proteins
    312652 (Plxnd1)
SSDB
Motif
Pfam: Plexin_cytopl Plexin_RBD TIG PSI Sema TIG_plexin Insulin_TMD
Other DBs
NCBI-GeneID: 312652
NCBI-ProteinID: NP_001381981
RGD: 1310796
Ensembl: ENSRNOG00000025209
Position
4:complement(150675377..150715706)
AA seq 1925 aa
MAPRAAGGAPPSARAAAAVPLPPRSHSRCPGLLPLPLLLLLGAARAGALEIQRRFPSPTP
TNNFALDGTAGTVYLAAVNRLYQLSGANLSLEAEATVGPVPDSPLCHAPQLPQASCEHPR
RLTDNYNKILQLDPGQGLVVACGSIYQGLCQLRRRGNISALAVSFPPAAPTAEPVTVFPS
MLNVAANHPNASTVGLVLPPASGTGGSRLLVGATYTGYGSAFFPRNRSLEDHRFENTPEI
SIRSLDARGDLAKLFTFDLNPSDDNILKIKQGAKEQHKLGFVRAFLHPAVPPHSAHPYAY
LALNSEARAGDKDSQARSLLARICLPRGAGGDAKKLTESYIQLGLQCAGGAGRGDLYSRL
VSVFPAREQFFAVFERPQGTPGARNAPAALCAFRFADVQAAIRAARTACFVEPAPDVVAV
LDSVVQGTGPACESKRNIQLQPEQLDCGAAHLQHPLTILQPLRASPVFRAPGLTAVAVAN
ANNYTAVFLGTATGRLLKISLNESMQVVSRRVLTVAYGEPVHHVMQFDPMDPGYLYLMTS
HQMARVKVAACEVHSTCGDCVGAADAYCGWCTLETRCTFKQDCANSSLPHFWTSASEGPS
RCPAMTVLPSEIDVHRDYTGMILQISGSLPSLSGMEMACDYGNGVRTVARVPGPAYGHQI
AYCNLLPRAQFPPFPAGQDHVTVEMSVRVKGHNIVSANFTIYDCSRIGQVYPHTACTSCL
STQWPCSWCIQLHSCVSNQSRCQDSPNPTSPQDCPQIVPSPLAPVPTGGSQDILVPLTKA
AFFHGTSLQCSFGLEENFEAVWANDSLVRCNQVVLHTTQKSQVFPLSLKLKGPPDRFLDS
PNPMTVVVYNCAMGSPDCSQCLGREDLGHLCVWNDGCRLRGPLQPLSGTCPAPEIRAIEP
LSGPLNGGTLLTIRGKNLGRRLSDVAHGVWIGNVACEPLADRYTVSEEIVCATGPAPGAF
SDVVTVNVSKEGRSREQFSYVLPRVHSLEPSMGPKAGGTRITIHGSDLNVGSMLQVLVND
TDPCTDLTRTATSITCTVPRGTLPSPVPVCVRFESRGCVHGNLTFWYMQNPVITAISPGR
SPVSGGRTITVAGERFHMVQNVSMAVHHIGREPTFCKVLNSTLIICPSPGALSNASAPVD
FFINGRAYADEAAEELLDPAEAQRGSRFRLDYLPNPQFSTAKREKWIKHHPGEPLTLVIH
KEQDSLGLESHEYHIKIGQVSCDIQIISDRVIHCSVNESLGTAEGQLPITIQVGNFNQTI
ATLQLGGSETAIVVSIVICSVLLLLSVVALFVFCTKSRRAERYWQKTLLQMEEMESQIRE
EIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEERYVLPSKTLNS
QGGSPPQETHPLLGEWNIPEHCRPSMEEGISLFSSLLNNKHFLIVFVHALEQQKDFAVRD
RCSLASLLTIALHGKLEYYTSIMKELLVDLIDASAAKNPKLMLRRTESVVEKMLTNWMSI
CMYGCLRETVGEPFFLLLCAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPRNLNV
SFQGCGMDSLSVRAMDTDTLTQVKEKILEAFCKNVPYSQWPRAEDVDLEWFASSTQSYVL
RDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKKDNTLGRVKDLDTEKYFHLVLPT
DELVEPKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIREDKPPLAVKYF
FDFLEEQAEKRGISDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIEKTDHIDACLSVIAQ
AFIDACSISDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIQDMTPLSEQEMNAHLAEE
SRKYQNEFNTNVAMAEIYKYAKRYRPQIMAALEANPTARRTQLQYKFEQVVALMENNIYE
CYSEA
NT seq 5778 nt   +upstreamnt  +downstreamnt
atggctcctcgcgccgcgggcggcgcaccccctagcgcccgggccgctgcggcggtcccc
ttgcctccgcgctctcactcgcggtgccccggtctgctgccgctgcctctgctgctgctg
cttggggcggcacgggcgggcgccctagagatacagcgccgcttcccctcgcccacgccc
accaacaacttcgccctggacggcacggcgggcaccgtatacctggcggcggtgaaccgc
ctgtaccagctgtccggtgccaacttgagcctggaggccgaggcgaccgtgggtccggtg
ccggacagcccgctgtgtcacgccccgcagctcccgcaggcctcgtgcgagcacccgcgg
cgcctcacggacaactacaacaaaatcttgcagttggacccgggccagggtctggtggtc
gcgtgcggctccatctaccagggtctgtgccaactgaggcgccggggcaacatctcagcc
ctggctgtgagctttccgcctgccgcgccgaccgcagaaccggtcaccgtgttccccagc
atgctcaacgtggccgccaaccaccccaacgcgtccaccgtgggactagtgctgccgccg
gcctccggcaccgggggcagccgtctgctcgtgggcgccacgtacaccggctacggaagc
gctttcttcccgcgcaaccgtagcctagaagaccaccgcttcgagaacacgcccgagatc
tctatccgctccctggacgcgcgtggagacttggctaagctcttcaccttcgacctcaac
ccgtcggacgacaacatactgaagatcaaacagggagccaaggagcagcacaagctgggc
ttcgtgcgtgccttcttgcacccggcggtgccaccgcacagcgcgcatccctacgcgtac
ctggcgctcaacagcgaggcgcgtgcgggcgataaagacagccaggcgcgcagcctgctg
gcgcgcatctgcctgccccgcggcgcgggtggcgacgccaagaagctcaccgagtcctac
atccaactgggcttgcagtgcgcgggcggcgcgggccggggtgacctctacagccgcctc
gtgtcggtcttccccgcgcgcgagcagttcttcgctgtcttcgagcggccccagggcacc
ccaggtgcccgcaacgccccggccgcgctctgcgccttccgcttcgccgacgtgcaggcc
gccattcgtgcagcgcgcaccgcctgctttgtggagccggcgccggacgtggtggcggtg
ctggacagcgtggttcagggcaccggaccggcctgcgagagcaaacgcaacatacagctg
cagccggagcagctggactgtggagcagcccaccttcagcacccactgaccatcctgcag
ccactgagggcatcgccggtgttccgtgctccagggctcacggccgtggctgtggccaat
gctaacaactacacagctgtctttctgggcactgccacggggaggctcctcaagatcagc
ctgaatgagagcatgcaggtagtaagccggcgggtgctgactgtggcctacggggagccc
gtgcaccatgtcatgcagtttgaccccatggatcctggttacctgtacctgatgacatcc
caccagatggcccgagtgaaggtggcggcgtgtgaggtacactccacctgcggggactgt
gtgggcgcggccgatgcctactgtggctggtgtactctggagacccggtgcacattcaag
caggattgtgccaactccagcctgccacatttctggaccagtgccagtgagggccccagc
cgctgccctgccatgacagtactgccgtctgagattgatgtgcaccgggactacacgggt
atgatcttacagatctcaggaagcctacccagcctcagcggtatggagatggcttgtgac
tacggaaatggcgttcgaacagtggcccgagtacccggccctgcctatggtcatcagatt
gcctattgcaacctcctgcccagggcccagttcccaccctttcctgctggccaggaccac
gtgactgttgagatgtctgtcagggtcaaaggacacaacattgtctcagccaatttcacc
atctacgactgcagccggattggacaagtctacccccatacagcctgtaccagctgcctg
tcgacacagtggccttgctcctggtgcatccagctgcactcctgtgtctccaaccagtct
cggtgccaggactcaccaaaccctacgagcccccaggactgtccccagatcgtgccctcg
cccctggcacctgtgcccacgggtggctcgcaagacatcctggtgcctctgactaaggcc
gccttcttccatggcacctccctccagtgcagctttgggctggaagagaactttgaggct
gtgtgggcgaatgactcgctggtccgctgcaaccaagtggtgctgcatacaacccagaag
agccaggtgtttccactgagcctgaagctgaaggggccacctgaccgattcctagatagt
cctaaccccatgacagttgtggtctacaattgtgctatgggcagccccgactgttcccag
tgcctgggccgtgaggacctgggtcacctctgtgtttggaatgatggctgtcgtctgaga
gggcccctgcagccactctctggcacctgcccagctcctgaaatccgagcgattgagcct
ctgagtggccccttgaacggtgggaccttgctgaccatccgcggcaagaacctgggccgt
aggctcagtgacgtggcacatggtgtgtggattggcaatgtggcctgtgaacccctggct
gacagatacacggtttcagaggagatcgtgtgtgccacagggcccgccccaggggctttc
tcagacgtggtaacggtgaatgtctccaaggaaggcaggtctcgggaacagttctcctat
gtgctgcccagggtccactcactggagccttccatgggcccaaaggcagggggcacaaga
atcaccattcacggcagtgacctcaacgtgggctccatgctccaggtcctggtgaacgac
acggacccctgcacggatcttacgcgcactgccaccagcatcacctgcactgtgccaagg
ggtaccctgccctctccagtgcctgtgtgtgtgcgcttcgagagccggggctgcgtgcac
ggaaacctcaccttctggtacatgcagaacccagtcatcacagccatcagcccaggccgc
agccccgtcagtggcggcaggaccatcaccgtggctggcgaacgtttccacatggtacag
aacgtatcaatggccgtacaccacattggccgggagcccacgttctgcaaggttctcaac
tccacactcatcatctgcccatcccccggagccctgagcaatgcttcagcacccgtagac
ttcttcatcaatggccgggcctatgcagacgaagcagctgaggagctgctggaccctgca
gaggcacagcggggcagccggttccgcctagactacctccccaacccccagttctccaca
gccaagagggagaagtggatcaagcatcacccaggagagccgctcaccctcgtcatccat
aaggagcaagacagcctggggctggagagccatgagtatcacatcaagattggccaggtg
tcctgtgacattcagatcatctcagacagagtcatccactgctcagtcaacgagtcactg
ggcacggccgaagggcagctgcccatcacaatccaggtggggaacttcaaccagaccatc
gccaccctgcaactggggggcagcgagacggccatcgtggtttccattgtcatttgcagt
gtcctgttactgctgtctgtggttgctctgttcgtcttctgcaccaagagccgccgtgct
gagcgctattggcagaagaccctgctgcagatggaagaaatggagtctcagatccgagag
gagatccgcaaaggctttgcggagctgcagacagatatgacagatctcaccaaggagctg
aaccgcagccagggcatccccttcttggagtacaagcactttgtgactcgtaccttcttc
cccaagtgctcttccctctatgaagagcggtatgtgctgccctcgaagaccctcaactcc
caaggtggctcccctccacaggaaacccacccactgctgggagagtggaatatccctgaa
cactgtcggcccagcatggaggagggaatcagtctgttctcctcgctgctcaacaacaag
cacttccttattgtctttgttcatgctctggagcagcagaaggacttcgctgtgcgtgac
aggtgcagcctggcatcactgttgaccattgcactgcatggcaagctggagtactacacg
agcatcatgaaggagctgctggtggatctcatcgacgcctcagcagccaagaaccccaag
ctcatgttgcggcgcaccgagtccgtggtggagaagatgcttaccaactggatgtccatc
tgcatgtatggctgcctgagggaaacagtaggtgagccgttcttcctgctgttatgcgcc
atcaagcagcagatcaacaaaggttccatcgacgccatcacaggcaaagcccgatacaca
cttaatgaggagtggctgctgagagagaacattgaggccaagccccggaacctgaacgtg
tccttccagggctgtggtatggattcactgagcgtgcgggccatggacactgacacgctg
acgcaggtgaaagagaagatcctggaagccttctgcaagaatgtaccgtactcgcagtgg
ccgcgggcggaggacgtggacctcgaatggtttgcctcaagcacccagagctacgtcctc
cgggacctggatgacacgtcagtggtggaggacggccgtaagaaactgaacacgctagcc
cactacaagatacctgagggtgcctccctagccatgagcctcacagacaagaaggacaat
accctgggccgagtgaaagacttggacacagaaaagtatttccatttggtgctacctacg
gatgagctggtagagcctaagaagtctcaccggcagagccaccgcaagaaagtgttgcca
gagatctacctgacccgcctgctgtccaccaagggcacactgcagaagttcttggatgat
ttgttcaaggctatcctgagcatccgagaggataagcccccgctggccgtcaagtatttc
tttgacttcctagaggaacaggcggagaagagaggcatctctgaccctgacaccttgcac
atctggaagaccaacagccttcccctccgcttctgggtgaacatcttaaaaaatccccag
tttgtcttcgacatagagaagacagaccacatcgatgcctgcctgtctgtcatcgcccag
gccttcatagatgcctgctccatctctgacctgcagctgggcaaggactcacccaccaac
aagcttctgtacgcgaaggagatccccgagtaccggaagattgtacagcgctattacaaa
cagatccaggacatgacgccactcagcgagcaggaaatgaacgcacacctggctgaggag
tcccggaaataccagaatgagttcaacacaaatgtggccatggctgagatctataaatat
gctaagaggtatcgcccacagatcatggctgccctggaggccaaccccactgcccgcagg
acccagctgcagtacaagtttgaacaggtggtcgctctgatggaaaataatatctatgag
tgttacagcgaggcctga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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