KEGG   Rattus norvegicus (rat): 312690
Entry
312690            CDS       T01003                                 
Symbol
Phc1
Name
(RefSeq) polyhomeotic-like protein 1
  KO
K11456  polyhomeotic-like protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    312690 (Phc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    312690 (Phc1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     312690 (Phc1)
SSDB
Motif
Pfam: PHC2_SAM_assoc zf-FCS_1 SAM_1 SAM_2 zf-CGNR
Other DBs
NCBI-GeneID: 312690
NCBI-ProteinID: NP_001101356
RGD: 1309203
Ensembl: ENSRNOG00000015191
UniProt: A6ILE3 D3ZVD1
Position
4:complement(157182348..157205504)
AA seq 1042 aa
MFPQPPRRVQRPGLESEHHSWGPWNAIMETESEQNSSSTNGSSSSGASSRPQIAQMSLYE
RQAVQALQALQRQPNAAQYFHQFMLQQQLSNAQLHSLAAVQQATIAASRQASSPNSSTAQ
QQTATTQASINLATTSAAQLISRSQSVSSPSATTLTQSVLLGNTTSPPLNQSQAQMYLRP
QLGNLLQVNRTLGRNVPLASQLILMPNGAVAAVQQEVPPAQSPGVHADADQVQNLAVRNQ
QASAQGPQIPGSTQKAIPPGASPVSGLSQASSQALAVAQASGASGQSLNLSQAGGGSGNS
LPGSMGPGGGGQAPGGLGQLPSSGLAGGNCPRKGTGVVQPLPAAQTVTVSQGSQTEAESA
AAKKAEGDGSSQQSVGMNLTRTATPAPSQTLISSATYTQIQPHSLIQQQQQIHLQQKQVV
IQQQIAIHHQQQFQHRQSQLLHTATHLQLAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQA
TTLAAPQPPQVPPTQQVPPSQSQQQAQTLVVQPMLQSSPLSLPPEPTPKPPIPIQSKPPV
APIKPPQLGAAKMSATQQPPPHIPVQVVGTRQPGTAQAQALGLAQLAAAVPTSRGMPGAV
QPGQAHLASSQPSSQAPGALQECPPALATGMTLAPVQGTAHVVKGGPTASSPVVAQVPAA
FYMQSVHLPGKAQTLAVKRKAESEEEREDLSALGSVLPTKASPAAESPKVIEEKNSLVEK
AEPVASLNANPPNSDLVALAPTPSAPPPTLALVSRQMGDSKPPQAIVKPQILTHIIEGFV
IQEGAEPFPVGCSQFLKETEKPLPAGLPTGLNESQSGGPLGGDSPCVDLDKKANLLKCEY
CGKYAPAEQFRGSKRFCSMTCAKRYNVSCSHQFRLKRKKMKEFQEASYARVRRRGPRRSS
SDIARAKIQGKRHRGQEDSSRGSDNSSYDEALSPTSPGPLSVRAGHGERDLGNTITTPST
PELQGINPVFLSSNPSQWSVEEVYEFIASLQGCQEIAEEFRSQEIDGQALLLLKEEHLMS
AMNIKLGPALKICAKINVLKET
NT seq 3129 nt   +upstreamnt  +downstreamnt
atgtttcctcagccacctcggcgtgtgcaacgcccagggcttgagtcagagcaccattct
tggggaccctggaacgctatcatggaaacggagagtgagcagaactcgagttcgaccaat
gggagttccagctcaggggccagctctcggccccagatagcacaaatgtccctgtatgag
cggcaggcagtgcaggctctgcaagccctgcagcggcagcctaatgcagctcagtacttc
caccagttcatgctccagcagcagctcagtaatgcccagctgcacagcctggcagccgtt
cagcaggccaccattgctgccagtcgtcaggctagctctccaaacagcagcactgcacag
cagcagaccgccaccacacaggcctcgatcaatctagcaaccacgtcagctgctcagctc
atcagccgatcccagagtgtgagctcccccagtgctaccaccctgactcagtctgtgtta
ctggggaacaccacttccccacctctcaaccagtcccaggcccagatgtatctgcggcca
cagctgggcaacctattgcaggttaaccggaccttgggccggaatgtgcctctagcctcc
cagctcatcctgatgcctaatggggcagtggctgcagtccagcaggaggtgccacccgct
cagtctcctggagttcatgcagatgcagatcaggtgcagaacttggcagtgaggaaccaa
caggcctcagctcaaggaccccaaataccaggctctactcagaaggccatccctcctgga
gcgtctcctgtttctggcctctcccaggcctcaagccaggctctagctgtggcacaggct
tctggggcctcaggccagtcactcaacctcagtcaagctggtggaggcagtgggaatagc
ctcccaggctccatgggtccgggtggaggtggccaggcgcctgggggtttgggtcagctg
ccttcttcaggactagctggtggaaactgtccccggaagggtacaggagtggtgcagccc
ttacctgcggctcaaacagtgactgtgagccagggaagccaaacagaggcagagagtgca
gcggccaagaaggcagaaggagatgggagtagccagcagagtgtgggcatgaacctgact
cggacagccacacctgcccccagccagacgcttattagctcagccacatacacacagatc
cagccccattccctgattcagcaacagcagcagatccacctccagcagaagcaagtggtg
atccagcagcagattgccatccaccaccagcaacagttccaacaccgccagtcccagcta
cttcacacagccacgcacctccagttggcccagcagcagcagcagcagcagcaacagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaacagcaagca
acaactctcgctgcccctcagccaccccaggtcccacctactcagcaggtcccaccttcc
cagtcgcaacagcaagcccagactctggtggtccaacccatgcttcagtcttcacccctg
tctcttccacctgaaccaactcccaaaccacctattcccattcagtccaaacctcctgta
gctcctatcaaacctcctcaactaggagctgctaagatgtcagctacacagcagccacca
ccacatatccctgtgcaagttgtcggtacccggcagccaggtacagcccaggcacaggct
ttgggattagcgcaactggcagctgctgtacctacttcccgggggatgccaggggcagtc
cagcctggccaggcccacctggcctcctcgcaaccttcatcccaggctcctggtgcactt
caagaatgtcctcctgcattggctactgggatgacccttgctcctgtgcagggaacggca
catgtggtaaagggtgggcctacagcctcctctcctgttgtggctcaggtccctgctgct
ttctacatgcagtcggtgcacctgccgggtaaagcccagacgttggctgtgaaacgcaaa
gctgagtctgaggaggagagagaagacctctctgcattgggctctgtgcttcctacaaag
gcatcaccagcagcagagagcccaaaggtaatagaggagaagaacagtcttgtagagaaa
gctgaaccagtggccagtttgaatgctaatcctccaaacagtgatctagtagccttggcc
cctaccccatcagcaccacctcctactctggccttggtgtccagacagatgggggactca
aaacccccacaggccattgtgaagccccagattctcacgcacatcattgaaggctttgtt
atccaggaaggagcagagcctttcccggtgggatgttctcagttcctgaaagaaacggag
aagccactgccggctggccttccaacagggctgaatgagagtcagtcaggtggcccttta
gggggtgatagcccctgtgtagacttagataagaaggcaaatctcctcaagtgtgaatac
tgtgggaagtacgccccagcagagcagtttcgaggctctaaaaggttctgctccatgaca
tgtgcaaagaggtacaatgtgagctgtagtcaccagttccgcttgaagaggaaaaaaatg
aaagagtttcaggaagccagctatgcacgtgttcggaggcgtggaccccgccgcagctcc
tctgacattgctcgtgctaagatccagggcaagcgccatcggggtcaagaggattctagc
cggggctcagataattccagctatgatgaagcactctctccgacatctcctgggccactg
tcagtaagagctgggcatggagaacgtgatctaggaaacaccattacaaccccgtccaca
ccagagttacagggcatcaaccctgtgttcttgtccagtaatcctagccaatggagtgtc
gaggaggtctacgagtttattgcttctctgcaaggttgccaagagattgcagaagagttt
cgttcccaggagattgatggacaggcccttttattacttaaagaagaacatcttatgagt
gccatgaacatcaaattaggtcctgctctcaagatttgtgccaagatcaatgtcctcaag
gagacctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (2)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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