KEGG   Rattus norvegicus (rat): 312706
Entry
312706            CDS       T01003                                 
Symbol
Emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    312706 (Emg1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    312706 (Emg1)
Enzymes [BR:rno01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     312706 (Emg1)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    312706 (Emg1)
SSDB
Motif
Pfam: EMG1 TetR_C_43
Other DBs
NCBI-GeneID: 312706
NCBI-ProteinID: NP_001101358
RGD: 1307665
Ensembl: ENSRNOG00000012828
UniProt: A6ILJ1 D3ZDS4
Position
4:complement(159195545..159203826)
AA seq 244 aa
MAATSGGFQPRERRFSVQEQDWDPAPPKRPRLGAGSKCGGRRLIVVLEGASLETVKVGKT
YELLNCDKHKSMLLKNGRDPGEVRPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEV
NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKIGTSFSV
EDISDIRELVPSSDPVVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKVTTAFEEV
WGVI
NT seq 735 nt   +upstreamnt  +downstreamnt
atggctgcgaccagtggtggcttccaacctcgtgagcggcgtttttcagtgcaggaacag
gactgggaccctgcgccgcctaagagaccccggcttggggcaggaagcaagtgtggaggc
cgtaggctcattgtggtgttggaaggggccagtctggagacagtcaaggtagggaaaact
tacgagctactcaactgtgacaagcacaagtccatgttgttgaagaatggacgggaccca
ggggaagtcagaccagacatcacccaccagagcttgctgatgcttatggacagccccctg
aaccgagctggcttgctccaggtttatatccacacacagaagaatgtgctcattgaagtg
aacccccagactcggattcctaggacctttgaccgattttgtggcctcatggttcagctt
ttacacaaactgagcgtccgagcagctgacggccctcagaagcttttgaaggtaattaag
aatccagtgtctgaccacttcccagttggctgtatgaaaattggcacttccttttctgtt
gaggacatcagtgacattcgagagttggtgcccagtagtgacccagttgttttcgtagtg
ggggcctttgcccatggcaaggtcagtgtggagtacacagaaaagatggtgtccatcagc
aactacccactctctgccgcgctgacctgtgctaaagttaccacagcttttgaagaagta
tggggcgtcatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system