KEGG   Rattus norvegicus (rat): 312824
Entry
312824            CDS       T01003                                 
Symbol
Recql
Name
(RefSeq) ATP-dependent DNA helicase Q1
  KO
K10899  ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    312824 (Recql)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     312824 (Recql)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     312824 (Recql)
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII RQC Mod_r
Other DBs
NCBI-GeneID: 312824
NCBI-ProteinID: NP_001012098
RGD: 1311071
Ensembl: ENSRNOG00000012602
UniProt: Q6AYJ1 A6IMT6
Position
4:complement(177039351..177063968)
AA seq 621 aa
MASIPALTDELESVSSELHAVDIQIQELTERQHELLQRKSVLTKRIKQCLEDSAAEASGD
CDTSPAAWSKEDFPWSGKVKHVLRDVFKLQKFRPLQLETVNATMARKDIFLVMPTGGGKS
LCYQLPALCSDGFTLVICPLISLMEDQLMVLQQLGISATMLNSSSSKEHVKCVHTEMMNK
NSHLKLIYVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGI
LKRQFPNISLIGLTATATNHVLKDAQKILCVEKCLTFTASFNRPNLYYEVRQKPSSAEDF
IENIANLINGRYKGKSGIIYCFSQKDSEQVTISLQKLGVRAGTYHANMEPEDRTKVHTQW
SANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDWRADCILYYGF
GDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRALIAQHFDEVWNADACNKMCDNCCK
DDSFEKKNITEHCQALIKILKQAEGLNEKLTPLKLIDAWMGKGAAKFRVAGVAVPALPRE
DLEKIIVHALLQQYLKEDYSFTAYATISYLKVGPRASLLSNEGHAVTMQVKRSTQSSVRA
ASPEACEVDSKGKEKSSAVLC
NT seq 1866 nt   +upstreamnt  +downstreamnt
atggcttccatcccagctctaacggatgaactggagtctgtgtccagtgagctccatgca
gttgacatccagattcaagaacttacagagaggcagcacgagctccttcagagaaagtca
gtcctgacaaagagaatcaagcagtgcttagaggactctgctgccgaggcgagcggcgac
tgtgacacgtctccagctgcatggagtaaagaagatttcccatggtccggaaaggtaaaa
catgtgctgcgagatgtgtttaaactgcagaagttcagacctctgcagctggagactgtc
aatgccaccatggcgagaaaggacatctttcttgtcatgcccacaggaggagggaagagc
ttgtgctaccagctgccagcgctgtgctcagacggttttacactggtgatttgtccactc
atctctcttatggaagatcagctgatggttttacaacagttggggatttcagctactatg
ttgaattcttctagctctaaggaacatgtaaaatgtgtgcacactgaaatgatgaataaa
aactcccacttaaagctgatttatgtgactccagagaaaattgcaaaaagcaagatgttc
atgtcgaggctagagaaagcctatgaggccgggagactgactggagtggcggtggatgaa
gtgcattgctgcagtcagtggggacatgacttcaggccggattacaaagcactcggcatc
ttgaagcgccagtttcccaacatctcactgattgggctgacagcaacagcaaccaaccat
gttttgaaggatgcacagaaaatcctatgtgtggagaaatgtttgacatttacagcgtct
ttcaacagaccaaatctctactatgaggttcggcagaagccctcgagtgctgaagacttt
atcgaaaacattgcaaaccttattaatggacggtacaaaggaaagtcaggaatcatatac
tgtttttctcagaaagactctgaacaagtcaccattagcttacagaagctgggggtccgt
gcaggcacttaccatgccaacatggagccggaggacaggaccaaggttcacacgcagtgg
tcagccaatgagcttcaggtggtagtggcaacagtcgcatttggcatgggaattgataag
cctgacgtgaggtttgtcatccatcattcaatgagcaaatccatggagaattactaccaa
gagagtgggcgtgccggtcgagatgactggagagcagactgtattctgtattacggcttc
ggagacatattcaggatcagctcgatggtggtcatggagaatgtgggacagcagaagctg
tatgagatggtgtcatactgccagaatatcagcaagtgtcgccgtgcgttaatagcccaa
cattttgatgaagtgtggaatgcagacgcctgtaacaaaatgtgtgacaactgctgtaaa
gacgactcgtttgagaaaaagaatataaccgagcactgccaagccctgatcaagattctg
aagcaggcagaaggactgaatgaaaagctcaccccactgaagctgattgatgcttggatg
ggaaagggagcagccaagttcagagtggctggcgttgctgtcccagcccttccccgagaa
gacctggagaaaatcatcgtacatgctctcctgcagcagtatctcaaggaagactacagc
ttcacggcttatgctaccatctcgtatctgaaggtgggacccagagctagtcttcttagc
aacgaaggccatgctgtcactatgcaagtgaagaggtccacacagagcagcgttagggct
gcgtcacctgaagcttgtgaagtggattcaaaggggaaagaaaagagctcagcagtacta
tgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (19)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (16)   
DNA sequence (18)   
   RefSeq(nuc) (16)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (54)   

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