KEGG   Rattus norvegicus (rat): 312855
Entry
312855            CDS       T01003                                 
Symbol
Ppfibp1
Name
(RefSeq) liprin-beta-1
  KO
K27096  liprin-beta
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    312855 (Ppfibp1)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    312855 (Ppfibp1)
SSDB
Motif
Pfam: SAM_1 SAM_2 SAM_PNT DUF16
Other DBs
NCBI-GeneID: 312855
NCBI-ProteinID: NP_001382567
RGD: 1310010
Ensembl: ENSRNOG00000031709
Position
4:181538249..181682079
AA seq 979 aa
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGLLE
MMETDEKEGLRCQIPDSTAEMLIEWLQNQMTNGHLPGNGDVYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLELMAEISNLK
LKLTAVEKDRLDYEDRFRDTEGLIQEINDLRLKVNEMDSERLQYEKKLKSTKDELASLKE
QLEEKECEVKRLQERLVCKTKGEGVEILDRDIEVQKMKKAVESLMAANEEKERKIEDLRQ
CLSRYRKVQDPAALAQGQEGECEGLFHSSSISTLLDAQGFSDLERSTSSTPGMGSPSRDP
LHTSAPEEFHTSVLQASVPSLFPTSMDEETCEKPKLATKPETSFEEGDGRAVLGADAEVS
LSDGVSTSSLQKSSSLGNLKKETSDGVEKESIQKPPEDKTPTDSHTFGTLPPKAPGHGAS
VDDSPFGTRKARSSFGRGFFKIKSGKRTASAPNLAETEKETDEHLDLAGTSRPKGSQGTS
PFQMSPPSPDSRKKSRGIMRLFGKLRRSQSTTFNPDDMSEPEFKRGGTRATAGPRLGWSR
DLGQSNSDLDTPFAKWTKEQVCSWLAEQGLGSYLSSGKHWIMSGQTLLQASQQDLEKELG
IKHSLHRKKLQLALQALGSEEETNYGKLDFNWVTRWLDDIGLPQYKTQFDEGRVDGRMLH
YMTVDDLLSLKVVSVLHHLSIKRAIQVLRINNFEPNCLRRRPSDENSITPSEVQQWTNHR
VMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMAQLLNIPPNKTLLRRHLATHFN
LLIGAEAQHQKRDAMELPDYVLLTATAKVKPKKLTFSNFGNLRKKKHEDGEEYVCPMELG
QASGSSQKGFRPGLDMRLYEEDDLDRLEQMEDSEGTVRQIGAFSEGINNLTHMLKEDDMF
KDFAARSPSASITDEDSNV
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgatgagcgacgctagtgacatgctggccgcggcgctggagcagatggacgggatcata
gcaggttctaaagccttggaatattccaatgggatctttgattgtcaatctcccacctcc
ccatttatgggaagcttgcgagctctgcaccttgtggaagacctgcgtggattgctggag
atgatggaaacggatgagaaagaaggattgagatgccagattccagactcaacagctgaa
atgctgattgagtggcttcaaaatcaaatgacaaatggacacctacctgggaatggagat
gtgtatcaagaaaggctagcacggctagaaaacgacaaggagtccctcgttcttcaggtg
agcgtgttgacagaccaggtggaggctcagggagagaagattcgggatttggagttctgt
cttgaagagcatagagagaagctgaatgccactgaagaaatgctgcagcaggagcttctg
agtaggacttccttagagacacagaagctggagctgatggctgagatctctaacttgaag
ttaaaactgaccgccgtagagaaggacaggctggattatgaagataggttcagagacaca
gaggggctaatacaagagatcaatgatttgaggctaaaagtcaatgagatggacagtgaa
agacttcagtatgaaaaaaagctcaagtcaactaaagatgaactggcgtctttaaaagag
cagctggaggagaaggagtgtgaagtgaagagactgcaggagagactggtttgtaagacg
aaaggagaaggggtcgaaatcctcgatcgagacattgaagtacagaaaatgaagaaggca
gtggagtctctgatggcagcaaacgaggaaaaggagcggaaaatagaagacctccggcag
tgcctgagcaggtacaggaaagtgcaggacccagcagctctggcccaaggccaggagggc
gagtgtgagggcctgttccactccagttctatctccaccctgttggacgcacagggcttt
agtgatctggagagaagcacttcttctacgccaggaatggggtctcccagcagggacccg
ctccacaccagtgccccagaggagtttcacaccagcgtcctccaagcttcagttccttcg
ctatttccgacatctatggacgaagaaacctgtgagaaacccaagctggctactaagcct
gagacttcgtttgaagagggtgatggaagagcagtcctcggtgctgacgctgaagtctcc
ctaagtgatggtgtctcaacttcgagtctgcagaaatccagtagccttggaaatctgaag
aaagagacatcagatggcgtggaaaaggagtctatccagaagcctccagaggataaaact
ccgaccgacagccacacatttgggaccctgcctcccaaagctccaggacatggcgcctct
gtggatgacagcccctttggcactcgaaaagccaggtcttcctttggccggggctttttc
aaaatcaaaagtgggaagaggacagcgagtgcaccaaacctcgctgagacagaaaaagag
acagatgagcacctagatttggctggtacatctcggccaaaaggttcacagggaaccagt
ccgttccagatgtcgccaccatctccagattccagaaagaaatccagaggcatcatgcga
ctctttgggaaacttagaagaagtcagtcaactacattcaacccagatgacatgtctgag
cctgaattcaaaagaggagggacaagggcaactgcaggacccaggcttggttggtctcga
gatttaggacagtccaacagtgacctggacacgccgtttgcaaagtggaccaaggagcag
gtgtgcagctggctggcagaacaaggcctgggctcctacctgagttccggcaagcattgg
attatgtctggccagacgcttttgcaggcttctcagcaagacctagagaaggagcttggc
atcaagcactcactgcatcgaaagaagctccagttggccctgcaggccctgggatctgaa
gaagagaccaactacggaaagctagacttcaactgggtcactagatggctggatgatatt
ggcctccctcagtacaagacgcagtttgatgaggggcgggtggacggccgaatgctacac
tacatgactgtggatgacctcctgtccctgaaggttgtgagtgtgctgcaccatctcagt
atcaaaagggccatccaagtcctgaggatcaataacttcgagccaaactgtcttcggagg
cggccgtctgacgagaacagcatcaccccatctgaggttcagcagtggaccaatcatcgt
gtgatggagtggctgcgctctgtggacttggcagaatatgcccccaacctcagaggcagt
ggtgtccatggagggctcatggttcttgagcctcgttttaacgtagaaactatggctcag
ttattgaacattcctccaaacaaaaccttgttgcgcagacatttggctacccatttcaac
cttctgattggtgctgaggcccagcaccagaagcgagatgccatggagttaccagattat
gtcctgctaacagctactgccaaagtgaagccaaagaaactgacctttagcaactttggg
aatctgaggaagaagaaacatgaagatggggaggagtatgtctgtccaatggagctaggc
caggcgtcgggtagctcccagaaggggtttagacctggcttggacatgcgcctgtatgaa
gaggatgatttggaccggttagagcagatggaagattcagaagggacggtgagacagata
ggtgcgttttctgaaggcatcaacaatctcacgcacatgttaaaggaagatgacatgttt
aaggattttgctgcccgctccccaagtgccagcatcacagatgaagactccaacgtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (27)   
   UniProt (1)   
   RefSeq(pep) (26)   
DNA sequence (27)   
   RefSeq(nuc) (27)   
Protein domain (3)   
   Pfam (3)   
All databases (66)   

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