KEGG   Rattus norvegicus (rat): 312896
Entry
312896            CDS       T01003                                 
Symbol
Trpa1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
  KO
K04984  transient receptor potential cation channel subfamily A member 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04750  Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09157 Sensory system
   04750 Inflammatory mediator regulation of TRP channels
    312896 (Trpa1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    312896 (Trpa1)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   312896 (Trpa1)
SSDB
Motif
Pfam: Ank_2 Ank Ank_4 Ank_3 Ank_5 Ion_trans SchA_CurD
Other DBs
NCBI-GeneID: 312896
NCBI-ProteinID: NP_997491
RGD: 1303284
Ensembl: ENSRNOG00000007354
UniProt: Q6RI86
Position
5:9163060..9217325
AA seq 1125 aa
MKRSLRRVLRPEERKEVQGVVYRGVGEDMDCSKESFKVDIEGDMCRLEAFIKNRRKLSKY
EDENLCLLHHAAAEGQVELMQLIINGSSCEALNVMDDYGNTPLHWAAEKNQVESVKFLLS
QGANPNLRNRNMMAPLHIAVQGMYNEVIKVLTEHKATNINLEGENGNTALMSTCAKDNSE
ALQILLEKGAKLCKSNKWGDYPVHQAAFSGAKRCMELILAYGEKTGYSREAHINFVNHKK
ASPLHLAVQSGDLDMIKMCLDSGAHIDMMENAKCMALHFAATQGATDIVKLMISSYTGSS
DIVNAVDGNQETLLHRASLFDHHDLADYLISVGADINSTDSEGRSPLILATASASWNIVN
LLLSKGAKVDIKDHLGRNFLHLTVQQPYGLRNLRPEFLQMQHIKELVMDEDNDGCTPLHY
ACRQGAPVSVNNLLRFNVSVHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGD
LHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNLK
CTDRLDEEGNTALHFAAREGHAKAVAMLLSYNADILLNKKQASFLHIALHNKRKEVVLTT
IRSKRWDECLQVFTHDSPSNRCPIMEMVEYLPECMKVLLDFCMIPSTEDKSCQDYHIEYN
FKYLQCPLSMTKKVTPTQDVIYEPLTILNVMVQHNRIELLNHPVCREYLLMKWCAYGFRA
HMMNLGSYCLGLIPMTLLVVKIQPGMAFNSTGIINETISTHEERINTLNSFPLKICMILV
FLSSIFGYCKEVVQIFQQKRNYFLDYNNALEWVIYTTSMIFVLPLFLDIPAYMQWQCGAI
AIFFYWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLLLAFGLSFYVLLNFQDA
FSTPLLSLIQTFSMMLGDINYRDAFLEPLFRNELAYPVLTFGQLIAFTMFVPIVLMNLLI
GLAVGDIAEVQKHASLKRIAMQVELHTNLEKKLPFWYLRKVDQRSTIVYPNRPRHGRMLR
FFHYFLSMQETRQEAPNIDTCLEMEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISET
EDEDNHCSFQDRFKKERLEQMHSKWNFVLNAVKTKTHCSISHPDI
NT seq 3378 nt   +upstreamnt  +downstreamnt
atgaagcgcagcttgaggagggttctgcgccccgaggaaagaaaggaggtccagggcgtc
gtctatcgcggcgtgggggaagacatggactgctccaaggaatcctttaaggtggacatt
gaaggagatatgtgcagattagaagccttcatcaagaaccgaagaaaactaagcaagtac
gaggatgaaaatctctgtcttctgcatcacgccgcagccgaaggtcaagttgaactgatg
caattgatcatcaatggctcttcctgtgaagcgctgaatgtaatggatgattatggaaat
accccactacattgggctgcagaaaaaaatcaagttgaaagtgtgaagtttcttctcagc
caaggagcaaatccaaacctccgaaatagaaacatgatggcaccccttcacatagctgta
cagggcatgtacaacgaagtgatcaaggtcttgaccgagcacaaggccactaacatcaat
ttagaaggagagaatgggaacacagctttgatgtccacgtgtgccaaagacaacagtgaa
gctttgcaaattttgttagaaaaaggagctaagctgtgtaaatcaaataaatggggagac
taccctgtgcaccaggcagcattttcaggtgccaaaagatgcatggaattaatcttagca
tatggtgaaaagaccggctatagccgggaggctcacattaactttgtgaatcataagaaa
gccagccctctccacctcgcagttcagagcggcgacttggacatgattaagatgtgcctg
gacagcggtgcacacatcgacatgatggagaatgccaaatgcatggccctccattttgct
gcaacccagggagccactgacatcgttaaactcatgatctcatcctatactggaagcagc
gatatcgtgaatgcagtcgatggcaatcaggagaccctgcttcacagagcctcattattt
gatcatcatgacctggcagactacctaatttcagtgggagcagacatcaacagcactgat
tctgaaggacgctctccacttattttagcaactgcttctgcatcctggaatattgtgaat
ttgctcctctctaaaggtgccaaagtagacataaaagatcatcttgggcgtaacttttta
catttgactgtgcagcagccttatgggctaaggaatttgcggcctgagtttttgcagatg
caacacatcaaggagctggtgatggatgaggacaatgatggatgtacgcctctccattat
gcttgtaggcagggggcccctgtctctgtaaataacctcctcaggttcaatgtgtccgtt
cattccaaaagcaaagataagaagtctcccctgcactttgccgccagctatgggcgcatc
aatacatgtcagaggcttctgcaagacatcagcgacacaaggcttttgaatgaaggggat
ctccatggaatgacccctctccatctggcagcaaagaatggacatgataaagtcgttcaa
cttcttctcaagaaaggggccttgtttcttagtgaccacaatggctggactgctttgcat
catgcgtccatgggtggctacactcagaccatgaaggtcattcttgacactaacttgaag
tgcacagaccggctagatgaagaagggaacacagcacttcactttgcagcacgggaaggc
catgcaaaggctgttgcgatgcttttgagctacaatgctgacatcctcctgaacaagaag
caagcttcctttctgcatattgcactgcacaataagcgcaaggaagtggttctcacaacc
atcaggagtaaaagatgggatgagtgtcttcaagtttttactcatgattctccaagcaat
cgctgtccaatcatggaaatggtggaatacctccccgagtgcatgaaagttcttctagat
ttctgcatgataccttccacagaagacaagtcctgccaagactaccatattgagtataat
ttcaagtatctccaatgcccattatccatgaccaaaaaagtaacccccacccaggatgtg
atctatgagcctcttacaatcctcaatgtcatggtccaacataaccgcatagagctcctc
aaccaccctgtgtgtagggaatacttacttatgaaatggtgtgcctatggcttcagagct
catatgatgaacctaggatcttattgtcttggtctcatacccatgacccttcttgttgtc
aaaatacagcctggaatggccttcaattctactggaataatcaatgaaactattagtact
catgaggaaagaataaacactctgaattcgtttccattaaaaatatgtatgattctagtt
tttttatcaagtatatttggatattgcaaagaagtggtccaaattttccaacagaaaagg
aactactttctggactacaacaatgctctggagtgggtcatctacaccaccagtatgatc
ttcgtgttgcccttattcctcgacatccccgcgtatatgcagtggcaatgtggagcgata
gcaatattcttctactggatgaacttcctactatatcttcaaaggtttgagaactgtggc
attttcattgttatgttggaggtgatttttaaaacattgctgagatcgacgggagtgttt
atcttcctgctattggcttttggcctcagcttttacgtcctcctgaatttccaagatgcc
ttcagcaccccgttgctttccttaatccagacgttcagtatgatgctgggagacatcaat
taccgagatgctttcctagaaccgttgttcaggaatgagttggcatacccggtcctcacc
tttgggcagcttattgccttcacaatgttcgtcccaattgttctcatgaacctactgatt
ggtttggcagttggggacattgctgaggtccagaagcatgcatcattaaagaggattgct
atgcaggtggaactgcataccaacttagaaaaaaagctgccattctggtacttgcgcaaa
gtggatcagaggtccaccatcgtgtatccgaatagacccaggcacggcaggatgctgcgg
ttttttcattactttcttagtatgcaagaaacacgacaagaagcaccaaacattgacaca
tgtttggaaatggaaatactgaaacagaaataccggctgaaggacctcacttctcttttg
gaaaagcagcacgagctcatcaaactcatcatccaaaagatggagatcatctcggagaca
gaagatgaagataaccattgctctttccaagacaggttcaaaaaggaacggctagaacaa
atgcatagcaaatggaactttgtcttaaacgcagttaagactaaaacacattgttctatt
agccacccagacatctag

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