KEGG   Rattus norvegicus (rat): 313038
Entry
313038            CDS       T01003                                 
Symbol
Phc2
Name
(RefSeq) polyhomeotic-like protein 2
  KO
K11457  polyhomeotic-like protein 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    313038 (Phc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    313038 (Phc2)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     313038 (Phc2)
SSDB
Motif
Pfam: PHC2_SAM_assoc SAM_1 zf-FCS_1 SAM_2 SAM_PNT zf-CGNR
Other DBs
NCBI-GeneID: 313038
NCBI-ProteinID: NP_001013187
RGD: 1307912
Ensembl: ENSRNOG00000006004
UniProt: A6ISF6 D4A0M3
Position
5:146285000..146383664
AA seq 850 aa
MENELPVPHTSSRASITTNTSGTNSSSGCSSSSGGGSGRPTAPQISVYSGIPDRQTVQVI
QQALHRQPSTAAQYLQQMYAAQQQHLMLQTAALQQQHLSSAQLQSLAAVQQASLVANRQG
STSGSSVSSQAPAQSSSLNLAASPAAAQLINRAQSVNSATASGLAQQAVLLGNTSSPALT
ASQAQMYLRAQMLIFTPTATVATVQPELGTGSPARPPTPAQVQNLTLRTQQTPAAAAAAA
ASGPAPTQPVLPSLALKPTPSSSQPLPPTPQGRTVVQGSPVGAKPSVTDNVTEPLKTDGN
SNMEARPGPDRATVPTVATHQLTAPAYTQLQPHQLLPQPSSKHPQPQFVAQQQPQPPRPT
PQVQSQPQLAAVSPSLALQPSPEGHAMPLGPVTQALPLQCSTAHVHKPGSSQQCHLPTPD
SGSQNGHPEGVSHAPQRRFQHTSAVILQLQPASPVPQQCAPDDWKEVVPAEKSVPVTRPG
LSPHQQAIITAIPGGLPGPKSPNIQQCPAHETGQGIVHALTDLSSPGMTSGNGNSASSIT
GTAPQNGENKPPQAIVKPQILTHVIEGFVIQEGAEPFPVGRSSLLVGNLKKKYAQGFLPE
KLPQQDHTTTTDSEMEEPYLQESKEEGTPLKLKCELCGRVDFAYKFKRSKRFCSMACAKR
YNVGCTKRVGLFHSDRSKLQKAGTTTHNRRRASKASLPTLTKDTKKQPSGTVPLSVTAAL
QLAHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQGQRDLELSDMHMRDLVGMGHHFLP
SEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKI
YARISMLKDS
NT seq 2553 nt   +upstreamnt  +downstreamnt
atggagaatgagctgccagtcccccacacatccagccgggccagcatcaccaccaacacc
agtgggaccaatagtagcagtggctgcagcagcagcagtggtggtggcagtggccgcccc
actgcaccccagatttctgtctacagtggtattcctgaccggcagactgtgcaggtgatc
cagcaggccctgcacaggcagcccagcacggcggcacagtacctgcagcagatgtatgct
gcccaacagcagcacctcatgctgcagacagcagccttgcagcagcagcacctcagcagc
gcacagctccagagccttgcagcagtgcagcaggcaagcctggtggccaacagacaaggg
agtacttctggtagcagtgtgtcctcacaggctcccgcccagtcttcctcactgaatctg
gcagcctccccagcagcagcccagcttatcaaccgggcacagagtgtcaattcagccaca
gcctcgggccttgcccagcaggccgtgctcttgggcaacacgtcctctcctgccctgact
gccagccaagcacagatgtacctcagggcacagatgctcatcttcacgcccacggccacc
gtcgctactgtacagcctgagctcggcactggctcccccgctcggccccctacccctgcc
caggtacagaacctgacgcttcgaacacagcagacaccagcagcagcagcagcagcagca
gcctcgggccctgcccctacccagcccgtcctgcccagcttggccctgaaacccacaccc
agcagtagccagcctctgcctcccacaccacagggcaggaccgtggttcagggttcccct
gtgggtgccaagcctagtgtgactgacaatgtgacggagccactcaagacagatggcaac
agcaacatggaggcccggcctgggcctgaccgcgccaccgttcctactgtggctactcac
cagctcactgcaccagcttacactcaactgcagccacaccaactcctcccacagccgtca
tcaaagcatccacagccccagtttgtggcccagcagcaaccacagccaccacggcctaca
ccccaagtccagtcccaaccccagcttgccgcagtctctccaagcctggccctacagccc
agtccagaaggccatgccatgcctctaggcccagtgacacaggccctgcctctccagtgc
tctactgcgcatgtccacaagccagggagcagccagcagtgccaccttcccacaccagac
agcgggtctcagaatggacatcctgagggtgtgtcccacgccccccagcgaaggttccag
cacacctcagctgtgatcttacagttgcagcccgcttctccagtgccccagcagtgtgct
cccgatgactggaaggaagtggtgccagcagagaagagtgtgcctgtgactcggccaggc
ctgtccccacaccagcaagccatcatcactgccatacctggtggcctgcctggacccaag
agtcccaacatccagcagtgcccagctcacgagactgggcagggcattgttcatgcactg
accgacctcagcagccccggcatgacctcagggaacggaaactctgcctccagcatcacc
ggcactgccccccagaatggtgagaataaaccaccacaggccattgtgaaaccccaaatc
ctgacgcatgttatcgaagggtttgtgatccaggagggggcggagcctttcccggtggga
cgctcgtccctgctggtggggaatctcaagaagaagtatgcacaggggttcttgcctgag
aagcttccacagcaggatcataccaccactaccgactcagagatggaggagccctacctg
caagaatccaaagaggagggtactcccctcaaactcaagtgcgagctctgtggacgggtg
gactttgcctacaagttcaagcgttccaagcgcttctgctccatggcttgtgcaaagagg
tataatgtgggatgcaccaaacgggtgggactttttcactcagaccggagcaagctgcag
aaggcagggaccacaacccacaaccgccggcgggccagcaaggccagtctgcccacactt
accaaggacaccaagaagcagccctcaggcactgtacccctttcagttactgctgccttg
cagctggcacatagccaggaagactccagccggtgctcagataactcaagctatgaggag
cccttgtcacccatctcagccagctcatccacctcccgacggcgacaaggccagagggat
ctggagctctctgacatgcacatgagggacctggtgggcatgggacaccacttcctacca
agtgagcccacaaaatggaatgtagaagatgtctatgagtttatccgctctctgccaggc
tgccaggagatcgctgaggagttccgtgcccaagagattgacgggcaagccttgctgctg
ctcaaggaggaccatctaatgagcgccatgaacatcaagctgggccctgccctgaagatc
tacgcacgcatcagcatgctcaaggactcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (2)   
   RefSeq(pep) (9)   
DNA sequence (14)   
   RefSeq(nuc) (10)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (41)   

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