KEGG   Rattus norvegicus (rat): 313045
Entry
313045            CDS       T01003                                 
Symbol
Trim62
Name
(RefSeq) tripartite motif-containing protein 62
  KO
K12030  tripartite motif-containing protein 62 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    313045 (Trim62)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     313045 (Trim62)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    313045 (Trim62)
SSDB
Motif
Pfam: SPRY PRY zf-C3HC4_4 zf-RING_UBOX zf-C3HC4 zf-B_box zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_6 zf-RING_5 KxDL GlgE_dom_N_S zf-RING_10 CorA Ribosomal_L37ae U-box zf-ANAPC11 DUF2383 DUF1664 Uso1_p115_C Phasin AAA_13 zf-Nse OmpH TMEM191C DUF2884 Gp-FAR-1 Prominin CCDC93_CC Fez1 DUF4559 NagJ_C Mis12
Other DBs
NCBI-GeneID: 313045
NCBI-ProteinID: NP_001414601
RGD: 1586169
Ensembl: ENSRNOG00000067048
Position
5:146516349..146545015
AA seq 475 aa
MACSLKDELLCSICLSIYQDPVSLGCEHYFCRRCITEHWVRQEAQGARDCPECRRTFAEP
ALAPSLKLANIVERYSAFPLDAILNARRAARPCQAHDKVKLFCLTDRALLCFFCDEPALH
EQHQVTGIDDAFEELQRELKEQLQALQDSAREHTEALQLLKRQLAETKSSTKSLRTTIGE
AFERLHRLLRERQKAMLEELEADTARTLTDIEQKVQRYSQQLRKVQEGAQILQERLAETD
RHTFLAGVASLSERLKGKTHETNLTYEDFPTSKYTGPLQYTIWKSLFQDIHPVPAALTLD
PGTAHQRLILSDDCTIVAYGNLHPQPLQDSPKRFDVEVSVLGSEAFSSGVHYWEVVVAEK
TQWVIGLAHEAASRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVRDKLDKVGVFL
DYDQGLLIFYNADDMSWLYTFREKFPGKLCSYFSPGQSHANGKNVQPLRINTVRI
NT seq 1428 nt   +upstreamnt  +downstreamnt
atggcgtgcagcctcaaggacgagctgctgtgctccatctgcctgagcatctaccaggac
ccggtgagcctgggctgcgagcactacttctgccgccgctgcatcaccgagcactgggtg
cggcaggaggctcagggcgcccgcgattgcccggagtgccggcgcacgttcgccgagccc
gcgctcgcgcccagcctcaagctggccaacatcgtggagcgctacagcgccttcccgctg
gacgccatcctcaacgcgcgccgagccgcgcgaccctgccaggctcacgacaaggtcaag
ctcttctgcctcacggaccgcgcgctcctctgcttcttctgtgacgagcccgcgctgcac
gagcaacaccaggtcactggcatcgacgacgccttcgaggagctgcagagagaactgaag
gagcagcttcaggcccttcaggacagcgcgcgggagcacacagaggcgctgcagctactc
aagcgacagctggcagaaaccaagtcttctaccaagagcctgcggaccaccattggggag
gcctttgagcggctgcaccggctactgcgagagcggcagaaggccatgctggaggagctg
gaggctgacaccgcccgcacgctgaccgatattgaacagaaggtccagcgttacagccag
caactgcgaaaggtgcaagagggggcccagatcctgcaggagcggctggctgagaccgac
cggcacaccttccttgctggagtggcctccctgtctgagaggctcaaagggaagactcat
gagaccaacctaacgtacgaagacttcccgacctccaagtacacgggccccctgcagtac
accatctggaaatctcttttccaggacatccacccagtaccggctgccctgaccctggac
ccaggcactgcccaccagcgcctgatcctgtctgacgactgcaccatcgtggcctatggg
aacctacacccacaaccacttcaggactcaccgaagcgctttgatgtggaggtgtcagtg
ctgggctctgaggccttcagtagtggtgtccactactgggaagtggtggtggcagagaag
acccagtgggtgattgggctagcccacgaggctgccagtcgcaagggcagcatccagatc
cagcccagccgtggcttctactgcattgttatgcacgacggcaaccagtacagcgcgtgc
acagagccctggacgaggctcaacgtccgtgacaagcttgacaaggtgggtgtcttcctg
gactatgaccagggcctcctcatcttctacaatgccgatgacatgtcctggctctatacc
ttccgagagaagttccctggcaagctctgctcctacttcagccccggccagagccatgcc
aacggcaagaacgtccagccactgcggatcaacacggtccgcatctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (34)   
   Pfam (34)   
All databases (47)   

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