KEGG   Rattus norvegicus (rat): 313048
Entry
313048            CDS       T01003                                 
Symbol
Rbbp4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03082  ATP-dependent chromatin remodeling
rno03083  Polycomb repressive complex
rno04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    313048 (Rbbp4)
   03083 Polycomb repressive complex
    313048 (Rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    313048 (Rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    313048 (Rbbp4)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     313048 (Rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     313048 (Rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     313048 (Rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     313048 (Rbbp4)
    PRC2.2
     313048 (Rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     313048 (Rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    313048 (Rbbp4)
  Chromatin remodeling factors
   NuRD complex
    313048 (Rbbp4)
   NuRF complex
    313048 (Rbbp4)
   NuRF complex (fruit fly)
    313048 (Rbbp4)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd ANAPC4_WD40 eIF2A MIOS_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 313048
NCBI-ProteinID: NP_001101382
RGD: 1593768
Ensembl: ENSRNOG00000021492
UniProt: A6ISI2 F7EQ75
Position
5:complement(146940207..146959501)
AA seq 425 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
EGQGS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggctgacaaggaagcggcctttgacgacgcggtggaagaacgtgtgatcaacgaggag
tacaagatatggaagaagaacaccccatttctttatgatttggtgatgacccatgccctg
gagtggcccagcctaactgcccagtggcttccagatgtgaccaggcctgaagggaaagat
ttcagcattcatcggcttgtcctgggaacacacacatcagatgaacaaaaccaccttgtg
atagccagtgtccagctccctaatgacgatgctcagtttgatgcatcccattatgacagt
gaaaaaggagaatttggaggttttggttctgtcagtgggaaaattgaaatagaaatcaag
atcaaccatgaaggagaagtaaacagggccaggtacatgcctcagaacccttgcatcatt
gcaacgaagactccatccagtgatgttcttgtttttgactacacaaagcacccttctaaa
ccagacccttctggagaatgcaacccagacttgcgtctccgtgggcatcagaaggaaggt
tatgggctttcttggaatccaaatctcagcgggcacttacttagtgcttcagatgaccat
accatctgcctgtgggacatcagtgcagttcccaaagaaggaaaagtggtggatgcaaag
accatctttacagggcatacagcagtagtggaggacgtttcctggcatctgctccatgag
tctctgttcgggtcagttgctgatgaccagaaactcatgatttgggatactcgttcaaac
aatacttccaagccaagccactcggttgatgctcacacagctgaagtgaattgcttatct
ttcaatccttatagtgagttcattcttgccacgggatcagctgacaagactgttgccttg
tgggatctgagaaatctgaaactcaagttgcattcctttgaatcacataaggatgaaata
ttccaagttcaatggtcacctcacaatgagactatcttagcttccagtggcactgatcgt
cggctgaatgtctgggatctaagtaaaattggagaagaacagtccccagaagatgcagag
gatggcccaccagagttgttgtttattcatggtggtcacactgccaagatatctgacttc
tcctggaatcccaatgaaccttgggtaatttgttctgtatcagaagacaatatcatgcaa
gtgtggcagatggcagagaacatttataatgatgaagaccctgaaggaagtgtggatcca
gaaggacaaggatcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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