KEGG   Rattus norvegicus (rat): 313069
Entry
313069            CDS       T01003                                 
Symbol
Rbm12b
Name
(RefSeq) RNA-binding protein 12B
  KO
K24526  RNA-binding protein 12
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    313069 (Rbm12b)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    313069 (Rbm12b)
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 313069
NCBI-ProteinID: NP_001395740
RGD: 1307658
Ensembl: ENSRNOG00000016330
Position
5:30394756..30507428
AA seq 843 aa
MAVVIRLQGLPFIAGPVDIRHFFKGLTIPDGGVHVIGGKAGEAFIIFATDEDARRAISRS
GGFIKDSSVELFLSSKVEMQKTIDMKRSARVGRGRPGPEASGVGNMYHFIDALKEEERYS
GYGSAVNPDAGFHINGTGLDLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCVD
GVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFGGTAS
KGGDTLHKRSEEHSPSRRLNDRYFWKRSRSKSPRTRSRSPLGFYVHLRNLSLHTNKRDLR
YLFRDTDLSNDQIKFLYKDDRRTRYAFVMFKNQKDYNTALGLHKTVLQYRPVLIDPISRK
EMVKIIECYEKKRPESLEEERPGRVSQKYSEEGFPGSGQKLCIYIRNLPFDVTKGEVQKF
FADFSLVEDDIYLLSDDKGIGLGEALVRFKSEEQAMKAERLNRQRFLGTEVLLRLISEEQ
MQEFGVNFSWMSNEKTQACSRSHDGDDCSCLFDLKDPLATGQSFGQSESIRYQPKDFRKM
GHFKHPRGYFQQSDRHSPEDFRHSPEDFGHPREEHSRRSREEDWRRPLEDWKWPLEDDFR
QSREKDCRQLPEKDFRCPWEEDFRRPSQEHFRRSYQEHIRQPPHEHFRYSREEDSRHVAD
EDFRYPADEDFRTSQEDLRCPTDEDFRQVCLEDHREVPEGDLRRSDKFRLPGEDFWTSSD
FRGHHPFVNFGHLEGGKFDFGKYNIGSFSEAKVTSDLNLSCRSGGIIPVKISNLPFKANS
NEILDFFHGYKVIPGSVSLQYNEQGLPIGEAIVAMTNYNEALAAVKDLSGRPVGPRKVKL
SLL
NT seq 2532 nt   +upstreamnt  +downstreamnt
atggctgtagtcatccgtttacaggggcttccttttattgcgggtcctgtggacatccgt
cacttcttcaagggattgactattcctgatggaggagtgcatgtgattggagggaaagct
ggggaggcttttataatttttgccacggatgaagacgcaagacgtgccataagtcgctca
ggagggtttatcaaggattcgtctgtagagctttttctgagtagcaaggtagaaatgcag
aagaccatagacatgaaaagaagtgctcgtgtaggaagagggcgaccaggacctgaggcc
tcaggggttggcaacatgtatcattttatcgatgctctgaaggaagaggaacgttattct
ggatatggctctgcagttaatccagatgctgggtttcatataaatggtacaggacttgac
ttgaggccaagaaagaccaggccactgaaggctgagaatccttacttgttccttcgaggt
ttgccttacttagtaaatgaagatgatgtccgtgtctttttctctggtttgtgtgtagat
ggagtaattctcttaaaacaccatgatgggcgaaataatggcgatgctatagtaaaattt
gcttcatgtgttgatgcttcaggaggtcttaaatgccatagaagtttcatgggttccaga
tttatagaagtcatgcagggttcagaacaacagtggattgaatttggtggtactgcaagc
aagggcggtgacaccctgcataagagatctgaagaacattctccttcaaggaggttaaat
gacaggtacttttggaaacggtctcgttcaaagtctcccagaacacgttctcgctctcct
cttggattttatgttcacttaagaaatctgtccttacatactaacaaaagagatctaagg
tatctctttagagatactgacctgagtaacgaccagattaagtttttatataaagatgat
cgaagaacgcggtatgcctttgtgatgttcaagaatcaaaaagactataacactgccctg
ggtttgcataagactgttttacaatatcgtccagttcttatcgatccaatttctagaaag
gaaatggtgaaaatcattgaatgctatgaaaagaagagaccagagtctttggaggaagag
aggccaggacgtgtttcacaaaagtactctgaagaaggcttccctggctctggtcagaag
ctgtgcatatatataagaaatttaccatttgatgttacaaaaggtgaagtgcagaagttc
tttgcagacttttctcttgttgaggatgacatttatttgctttctgatgacaagggaatt
ggtttgggagaagcactggtgagatttaaatcggaagagcaggccatgaaagctgaacgt
ttgaaccggcagagattcttggggacagaggtgttgttaagacttatatctgaggaacaa
atgcaggagtttggtgtaaatttttcctggatgtcaaatgagaagacacaagcctgctcc
cggtcacatgatggagatgactgttcctgtctgtttgacttaaaagatccactggcaaca
ggccagtcctttggccagtctgaaagcattcgttatcagccaaaagacttcaggaaaatg
ggtcatttcaagcatccccgagggtatttccagcagtctgacaggcactctcctgaggac
ttcaggcactctcctgaagactttggacaccccagggaggaacatagcaggcgctctagg
gaggaagactggagacggccccttgaggattggaaatggccactggaagatgattttagg
cagtctcgtgaaaaagattgtaggcagctaccagagaaggatttcagatgcccttgggaa
gaagacttccgacggccatctcaggagcacttcaggcgttcatatcaggagcacattaga
cagccaccccatgaacatttcaggtattcccgagaggaagattccaggcatgtggcagat
gaagattttaggtaccctgctgatgaggacttcaggacctcccaagaagatttgagatgt
cccactgatgaggactttaggcaggtgtgtctggaagaccacagggaagttcctgagggg
gatcttagacgttctgataagtttagacttcctggagaggatttttggacctcatctgat
ttcagaggtcaccatccttttgtgaactttggtcacctagaaggtggcaaatttgatttt
ggaaagtataacatagggagtttttcagaggcaaaagttacatctgatttaaatttaagt
tgtaggtcaggtggaataattcctgtaaaaatctcaaatcttccattcaaagctaattct
aatgaaattctagacttttttcatggttataaagtcatacctggttctgtttcattacag
tacaatgagcaaggattacctataggagaagctattgttgctatgacaaattataatgaa
gctctagctgctgttaaagatctaagtggtagaccagttggtccccgcaaggttaagctc
agtttgctttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (1)   
   Pfam (1)   
All databases (45)   

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