KEGG   Rattus norvegicus (rat): 313128
Entry
313128            CDS       T01003                                 
Symbol
Casp8ap2
Name
(RefSeq) CASP8-associated protein 2
  KO
K25593  CASP8-associated protein 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    313128 (Casp8ap2)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     313128 (Casp8ap2)
SSDB
Motif
Pfam: Myb_DNA-binding_7 ADIP DUF2959 DUF2205
Other DBs
NCBI-GeneID: 313128
NCBI-ProteinID: NP_001101391
RGD: 1305771
Ensembl: ENSRNOG00000006487
Vega: OTTRNOG00000001345
UniProt: A6IIJ5 D4A7V6
Position
5:51809366..51848633
AA seq 1962 aa
MAADDDNGDGTGLFDVCPASPLKNNDEGSLDIYAGLDSTVSDSTARSCVSFRNCLDLYEE
ILTEEGTAKEATYSDLQIEYGKCQQQMKDLMKRFKEIQTQNLNLKNENQSLKKNISALIK
TARVEINRKDEEINHLHQRLSEFPHFRNNHKTARTKDSRSKSPHLDNCSKTDHGVKSDVQ
KDIHPNTSQPNLEKEGKSHSEAQNSLHLSTGIEKHCTNNVWSRSPYQVSEGNSNEDNRRG
RNGVRHSQGSRGTDRTQKDLNSSCNDGEPRDKEAASRLHGNPEKHGSSEARAENKISEIK
SSTGLGNKSERSASSWEKETSRERPHTRVEPQNDKNLERQNERLQNTHRKELQSQDKAER
KGDVKFKPAGEEQGHRGRVDRALPPHSKNDMKYYGFNKYHPEERRGREDGKRDRGMSSHG
FQDRRCSSSLSSNRNSKYPHSKEVSVAHQWENTPFKAERHRTEDRRKRERENKEESRHVK
SDKKSPPEHLQRTHKDTKKSTANGKRQTEQKHGKGPVSTSELSKGTDNRECTMKVENGPN
EAKGKDLKLSFMEKLNLTLSPAKKQPVCQDNEHQIIGVPKPSGVCDSQSLEKTETVACLP
SVSEQDREEPKSELPEPKEALSATSQPRTSIPENKVKEENRLLFKSVENTVPCELLACGT
EISFPAPVEIEQARCLVQSMEVEETCAGARAAASVVMRVLPEHASEDFSQELGTKRHDDI
NSCDISEGGKKKVVLSPKAAAASESHLEPVVEEPSISPVNCSGDNNPKLEPSLEERPKVE
NKSSPLEPCLPKEMFVPSPQKTELIDHKIDTGESNSVYQDDDNSVLSIDFNNLRPIPEPI
SPLNSPVRPVSKVLSMESSCTIPLYDSSHKDEFPSNSTLSTFKSQSDLNKENEKPVPKLD
KCSEAESCKNLSVDELEEGEIRSDDEESVAQKRLEKSARPRTSTEVPPGKISPGSRRSTV
HVHKDNGRTVVKLPRDRITWSQRSNESRPSNTERKSKTMSISSLEKILPLILAPSSVWEV
MHMLRLLGKHVRKNYMKFKIKFSLTQFHRIIESAILSFTSLIRYLDLSKICKSVSTLQKS
LCDVIESNLKQVKKNGIVDRLFEQQQTDMKKKLWKFVDEQLDYLFEKLKKILLKFCDSVK
HENDSSEGKLGKKYKERAQHSNCQKKKMDNKEIRREKVLKSENTVNFKSSLGCEKFEEKH
QDQNKTNTTTVKHDVKRTFSTCTDNNTKNSECKEQFLGMNCPSTPRPGETEGNVEEGTPA
AQHACVKSERGFEILTEQQASSLTFNLVSDAQMGEIFKSLLQGSDLLDTGGTEKAEWELK
TPEKQLLESLKCESAPACTTEELVSEAASLCPKVISDDNWSLLSSEKGPSLSSGLSLPVH
PDVLDENCMFEVSSNLALSKDNVYSSEKSKPCISSILLEDLAVSLTVPSPLKSDGHLSFL
KPEVLSTSTPEEVISAHFSEDALLEEEDASEQDIHLALESDNSSSKSSCSSWTSRSVASG
FQYHPNLPMHAVIMEKSNDHFIVKIRRATPSTSPGLKHGMVAEESLTPLPRTGKEADGAA
EKEPTLFQSTVLNPVQDLENSDKSIDKSKPTHEDQNSIVQTQVPDIYEFLKDASNKVVHC
DQVVDDCFKLHQVWEPKVSESLQELPSMEKNAHSVDDHLPNTHIDLTKDPATETKSLELM
DVTVLDIDHLEHSKPNLDQDAQITCTSLQHDAVDAFIDLTHDVSNESKNESNEPVLTVEG
VGCQVICIDDDNHKEGKVGKVNSSLECTVEETCIDLTSESAGSFEVKRHTLKSEPPSKSD
CLELPETLGNGHKKRKNSPAVSHSSQKKQRKDMDLSSEKTKRLSPNSDRTGDAHRKHGSK
KREPAVSDTSLSSEVNPEVKGSTAPLATFPGSLSAKNVIKKKGEIIVSWTRNDDREILLE
CQKRMPSLKTFTHLAVKLNKNPNQVSERFQQLKKLFEKSKCR
NT seq 5889 nt   +upstreamnt  +downstreamnt
atggcagcagatgatgacaatggtgatggaacgggtttgtttgatgtctgtcctgcctct
cctcttaaaaataatgatgaaggctcattggacatatatgctgggttggacagtactgtt
tctgacagtactgctaggtcctgcgtgtcgttcagaaactgtctggatttgtatgaagag
atcctgactgaagaaggaactgcaaaggaggcaacatacagtgacttgcagatagaatat
gggaaatgtcagcagcaaatgaaagatctgatgaaaagatttaaggaaatacagacacag
aacttgaacttaaaaaatgaaaaccagtctcttaagaagaatatctcagcacttatcaaa
actgccagagtggagataaaccgtaaggatgaagagataaatcatcttcaccaaagattg
tctgagtttccacattttcgaaataaccataaaactgcaagaacaaaagattcacgatcc
aaatctccccatttggacaattgttcaaagactgatcatggagttaaaagtgatgttcag
aaagatatacatcctaacacttcacaaccaaacttggaaaaggaagggaaatcacattct
gaagcacagaattctttgcacttgtctacgggtattgagaaacattgtacaaacaatgtc
tggtcacgttctccttaccaggttagtgaaggtaactcaaatgaagataatagaagagga
aggaatggcgtcagacatagccaaggtagcagaggaactgacagaacacagaaagacttg
aatagcagctgtaatgatggcgagccaagggacaaagaggctgcttccagactacacgga
aaccctgagaaacatggaagcagtgaagcaagggctgagaacaaaatttcagagattaaa
agtagcactggtttgggaaataaaagcgagcgcagtgcctcttcttgggaaaaagaaact
tccagagaaaggccacatactcgagtggaacctcaaaatgacaaaaatctagagagacaa
aatgaaagattacaaaatacacacagaaaagagcttcagtctcaggacaaagcagaaaga
aaaggtgatgtgaagtttaaaccagcaggagaggagcaggggcatcggggaagagtggac
cgtgcattacctcctcattccaagaatgacatgaaatattatggcttcaataagtatcat
ccagaagagagaaggggaagggaagatggtaaacgagacagaggcatgagcagtcatggc
tttcaagatagaagatgttcatcttctctttcaagcaacagaaatagcaaatacccacac
tccaaggaagtcagtgttgcacaccagtgggaaaatacacctttcaaagcagaaagacat
agaactgaggacaggaggaaaagagaacgagaaaacaaagaagaaagtagacatgtgaaa
agtgacaaaaaatcacctccagaacacttgcaaaggactcataaagacactaagaaaagt
actgctaatggaaagagacagacggagcagaaacacggtaaaggtccagtctctaccagc
gagctttctaaagggacagacaatagagagtgtacaatgaaagtggagaatgggccaaat
gaagcaaagggcaaggacttaaagttaagcttcatggagaagctgaacttaactctttct
cctgctaaaaagcagcctgtttgtcaagataacgagcatcaaataattggtgttcccaag
cccagtggcgtgtgtgactcacagtccttggagaagactgaaacagtggcatgtcttcct
tctgtcagtgaacaagatagagaggaacccaaatcagagttaccagagccaaaggaggct
ctttcagcaacatctcaacccaggaccagcattccagaaaataaagtgaaggaagaaaat
agattgttatttaaatctgttgagaatactgtgccttgtgaactgcttgcttgtggcacg
gaaatttccttcccagcacctgtagaaattgagcaagcaagatgtttggtccaatcaatg
gaagtggaagagacatgtgctggtgcaagggcagctgcttctgtggtgatgcgtgtatta
ccagaacatgcttctgaagacttcagccaagaattgggcaccaaaagacatgatgatata
aattcgtgtgatatttctgaaggtgggaaaaaaaaggtggttctttcaccaaaagcagca
gcagccagtgagagccatctggagcctgtggttgaagaacctagcatttcaccagtaaac
tgttcgggagacaataatcctaaacttgaaccttctcttgaagagagacctaaggttgag
aataaatcttctcctttggagccttgtttacctaaagagatgtttgtaccttcaccacag
aagactgagttgattgaccacaaaatagatactggagaatcaaactcggtatatcaagat
gatgataactcagttttgagtattgactttaataatttgagacctattccagaacccatc
agccctctgaatagtccagtgagaccggtatccaaagttcttagcatggagagctcatgt
acaattccactgtatgatagcagccataaagatgagtttccatccaattcaactctttct
accttcaagagtcagtctgatctaaataaggaaaatgaaaaaccagttcccaaattggac
aaatgttcagaagcagaatcctgtaagaatttgtctgtagatgaattagaagaaggggaa
attagaagtgatgatgaagaatctgtagcacaaaagcgtttggaaaagagtgcaagaccc
agaacttctactgaagtgccgccaggtaaaatcagcccaggaagcaggaggagcactgtg
catgtgcataaggataacgggaggacagttgtaaaactccctcgggacagaatcacatgg
agccaaagatcaaatgaatctagaccctcaaacaccgaaaggaaaagtaaaacaatgagc
atctccagcttggaaaaaatacttccgcttattcttgcaccctcctccgtatgggaagtt
atgcatatgttacggttgctaggaaaacatgtaaggaaaaattacatgaaattcaagata
aaattttcattgacacaatttcatagaattattgaatcggcaattttgagtttcacatca
ctaattagataccttgatttgtctaagatctgtaaatcagtaagtactttacagaagagt
ctttgtgacgttatagaatctaaccttaaacaagtgaagaagaatggcatagttgaccgt
ttatttgaacaacaacaaacagatatgaaaaaaaaattgtggaagtttgtggatgaacaa
cttgattatttgtttgaaaaacttaaaaaaatcctactaaagttttgtgattctgtaaag
catgaaaatgacagtagtgaaggaaaacttggaaaaaaatataaagagagagcccaacat
tcaaattgtcagaagaagaaaatggacaacaaagaaatacggagagaaaaagtgctaaaa
tcagaaaatactgtgaattttaaatcttcactggggtgtgaaaaatttgaagaaaaacat
caagaccaaaataaaaccaatactactacagtaaagcatgatgtgaaaagaacttttagc
acttgcactgataataatacaaagaactctgaatgtaaagagcagtttctgggaatgaac
tgcccgagtacccccaggccaggagaaactgaaggcaatgtggaggaggggacaccggcg
gcacagcacgcctgcgttaagtcagagcggggctttgagatcctcaccgagcagcaggcg
tccagccttacttttaacttagtgagtgacgcacagatgggtgagatatttaaaagtttg
ctacaaggttctgatctgttggacacaggtggcactgaaaaagcggagtgggaattaaag
actccagagaaacagctgctagagagcctcaagtgtgagtctgcaccagcttgtacaaca
gaagagctagtttcagaggcggcttctctctgtccaaaggtgatcagtgatgataattgg
tctttattatcatctgaaaagggcccatctctatcttcagggctttcactgccagttcat
cctgatgtgttagatgaaaattgtatgtttgaagtatcttctaaccttgctttaagtaaa
gataatgtatacagctcagaaaagagtaagccctgcatttcttccatactcttagaagat
cttgcggtctctttaacagtaccgtcacctctgaagtcagatggccatttgagtttctta
aagcctgaagttttgtcaacttcaactcctgaagaagttattagtgcacattttagtgag
gatgctttgcttgaggaagaggatgcatctgaacaggacattcacttagctctagagtct
gataactcaagcagtaagtcaagctgttcctcatggacaagccggtctgttgcttcaggc
tttcagtaccaccctaatcttcccatgcatgctgtcattatggaaaagtccaatgatcat
ttcattgtgaaaatacggcgtgcaacaccatctacctcccctggccttaaacatggtatg
gtagctgaggagtcgttgacacctttgcctagaactggaaaagaagctgatggggcagca
gagaaagaacctaccctgtttcagagtacagttttaaaccctgtccaagacttggaaaat
tccgacaaaagtattgataagagcaaaccaactcatgaagatcagaactctatagtacaa
acacaggttccagatatatacgaatttcttaaagatgcttcaaataaggtggttcattgt
gatcaagtggttgatgattgcttcaagttgcatcaagtatgggaaccaaaagtttctgag
agccttcaagaattgccttcaatggaaaaaaatgcacactctgttgatgatcatcttcct
aatacacacatagatctaacaaaagatccagctactgagactaaaagcttggagctaatg
gatgtaacagttttagatatcgatcacttggaacattctaaacccaacttagatcaagat
gcacagataacgtgtacttcgttacagcatgatgctgtagatgcttttattgatttgaca
catgatgtttcaaatgagagtaaaaacgaaagtaatgaacctgtgttaactgttgaaggt
gtgggatgccaggtaatatgtatagatgacgataaccacaaagaaggaaaagtggggaag
gtaaacagttccttagaatgtactgttgaggaaacctgtattgacttgacctcagagtct
gctggctcctttgaagtaaagagacacactttaaagtcagagcctccatcaaagtcggat
tgtttagagttgcctgagactctggggaatggtcacaagaagagaaagaacagtcctgct
gtgagtcactcttctcagaaaaagcaaagaaaggacatggacttaagtagtgaaaagacc
aagagacttagtcctaattctgatagaactggtgatgctcacagaaagcatggcagcaag
aagagggaacctgcagtaagtgacacatccttgtcatcagaggtcaacccagaggtgaag
ggctcaacagcaccacttgctacttttccaggaagcctttctgcaaaaaatgttatcaaa
aagaaaggagaaattatagtttcatggacaagaaatgacgacagggaaattttactggaa
tgtcagaaaagaatgccgtccctgaaaacatttacccacttggctgtcaaactgaataaa
aatccaaatcaggtttcagagaggttccagcaactgaaaaagctttttgagaagtcaaaa
tgcaggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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