KEGG   Rattus norvegicus (rat): 313167
Entry
313167            CDS       T01003                                 
Symbol
Nol6
Name
(RefSeq) nucleolar protein 6
  KO
K14544  U3 small nucleolar RNA-associated protein 22
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    313167 (Nol6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    313167 (Nol6)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    313167 (Nol6)
SSDB
Motif
Pfam: Nrap_D5 Nrap_D4 Nrap_D2 Nrap Nrap_D3 Nrap_D6 UT
Other DBs
NCBI-GeneID: 313167
NCBI-ProteinID: NP_001414130
RGD: 1308033
Ensembl: ENSRNOG00000010409
Vega: OTTRNOG00000000933
Position
5:complement(61055863..61083249)
AA seq 1146 aa
MGPAPAGQQQRGSTSTGEPEVMELALEGLGKEKASSRKRAQAEAPAEGLPQPVKLSREEL
YKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSEKKKERIDAFLKEVIKRIQKVP
PVPEAELTDQSWLPAGVRVPLHQVPYAVKGSFRFLPPSQITIVGSYPLGTCMRPDINVDV
VLTMPREILQDKDGLNQRYFRKRALYLTHLAYHLARDPLFGSVRFSYPSGCHLKPSLLLR
PHGKDERLVTVRLYPCPPLDFFRPCRLLPTKNNVRSAWYRGQSCPDYASLEPPTPHYNTW
ILQDTALEAHMHLLSSVLASAQGLKDGVALLKVWLRQRELDKGLGGFNGFLISMLVAFLV
SKRKIHTTMSGYQVLRSVLQFLATTDLTINGISFSLSSDPSLPSVADFHQLFAVVFVDPS
GRLNLCADVTASTYNQVQYEAELSMALLDSKADDGFQLLLMTPKPMIQAFDHVVHLRPLS
RLQAACHQLKLWPELQDNGGDYVSAALGPLTNILVQGLGCRLHLLAHSRPPVPEWAINQD
PPKHKDAGTLTLGLLFRPEGLTSVIDLGPEADRPEAAEFRQFWGSRSELRRFQDGAIREA
VVWEAESLSEKRLIPHQVVTHLLALHADIPDTCIHYVGGFLDALIQGPRETSSTGEEALA
LAVRCYDDLSRLLWGLEDLPLTVSAVQGAHPVLRYTEVFPPAPVRPAYSFYNRHQELASL
LPRLDKPCPAYVEPMTVVCHLEGSGQWPQDAEAVQRVRAAFQLRLAEVLTQQHRLQCRAT
ATHTDVLKGGFVFRIRVAYQREPQILKVVRSPEGMISMRDTPASLRLERDTRLLPLLTSA
LHGLQQQYPAFSGVARLAKRWVRAQLLGEGFTDESLDLVAASLFLHPEPFTPPSVPQVGF
LRFLYLISTFDWKNNPLIVNLNSELTAEEQVEIRSSFLAARTQLPVMVIVTPQDRRSSVW
TQDGPSAQILQQLVSLAAEALPILEKQLMDPRGPGDIRTVFRPPFDIYDVLIHLTPRHIP
RHRQAVDPPAASFCRGLVTEPGPSSLMPVLGYDPPQLYLAQLREAFGDLALFFYDQHGGE
VIGVLWKPSSFQPQPFKASSLKGRMVVSRGGELVTVPNIEAILEDFAVLGEGLVQAVEAR
SERWTV
NT seq 3441 nt   +upstreamnt  +downstreamnt
atgggaccagcccccgccggacagcaacagcgcgggtccacttcaactggggagccagag
gtgatggaacttgccttagaaggcttgggcaaagagaaggcatcctcaagaaagcgtgcc
caagcagaagcacctgcggaaggcctccctcagccagtgaagctcagtcgggaagagctg
tacaaggagcctacaaatgaagaactgaatcgcctccgcgagacggagatcttgttccac
tccagcttgcttcgtttacaagtggaggagttactaaaggaagtcagactgtcagagaag
aagaaagagaggattgatgctttcctgaaggaggtcatcaagcggatccagaaagttccc
ccagtccctgaggctgagctcactgaccagtcatggctcccagctggggtccgagtgccc
ctccaccaagtaccctacgctgtgaagggctccttccgcttcctgcctccatcccagatc
actattgtgggcagctaccctctgggtacttgtatgcgaccagatatcaatgtggatgtg
gtcctgaccatgcccagggaaatcttacaggacaaagatgggctgaaccagcgctacttc
cgcaagcgggccctttatctgactcacttagcctaccacctggcccgggatcccctcttt
ggcagtgttcgcttctcttaccccagcggatgccacctgaagccctcactgctactgcgg
ccacatgggaaggatgagcgcctggttactgtacgcctgtatccgtgccctcctttggac
ttcttccgcccttgccgcttgctgccaaccaagaacaatgtgcgctctgcctggtaccga
gggcagagctgtccagattatgctagcttagagcctcctaccccccactataacacctgg
atcctgcaggatacagctcttgaggctcacatgcacttgctgtccagtgtgctggcctcc
gcccaggggctgaaggacggtgtggcgcttctgaaggtttggctgaggcagcgggagctg
gacaagggcctgggtggatttaatggattcctaatctccatgctggttgccttcctcgtg
tctaaacgaaagatccataccaccatgagcggctaccaggtcctgagaagtgtcctgcag
ttcctggccactacagatctgacgatcaacggaatcagcttctccctcagctcagatccc
tccttgccgtccgtggctgacttccaccagcttttcgccgttgtgtttgtggacccatca
ggccgtctcaacctctgtgcggatgttacagcttccacttacaaccaggtgcagtatgag
gcagagctctctatggcattgctggacagcaaagctgacgacgggtttcagctgctcttg
atgacgcccaaacccatgatccaggcttttgaccacgtggtccatctccgtccactgagt
cgtctgcaggcagcatgtcaccagctgaagctttggccagagttgcaggacaacggcggg
gactatgtttcggcggctttgggcccactgaccaacatcttggtgcagggtctggggtgc
cggctgcatctgctggctcactcccggcccccagtcccagagtgggctatcaaccaggat
cccccgaagcacaaggacgccgggaccttgactctgggattgctcttccggcctgaggga
ctgaccagcgttattgatcttggcccagaggctgacaggcctgaggctgctgaattccgt
cagttctggggatcccgctcggagctcagacgtttccaggatggagccatccgggaagct
gtggtctgggaggcagaatctctgtctgagaagcgccttattcctcaccaggtggtcacc
cacctcttggcactccatgctgacatcccggacacctgtatccactatgtgggtggcttc
ctcgatgcattgatccaaggccccagagagacttccagcacaggtgaggaggccctggca
ttggctgtgcgctgctatgatgacctcagccgcctgctctgggggctggaggatctccca
ctcactgtgtctgctgttcagggcgctcacccagtgctgcgctatacagaggtgttcccc
ccagctccagttcgacctgcctattccttctataaccgccaccaagagctagcctcactg
ttgccccggctggataagccctgcccagcctatgtggagcctatgactgtggtttgtcac
ctggagggcagcgggcagtggcctcaggacgcagaggctgtgcagcgggtccgcgctgcc
ttccagctgcgcctggcagaggtgttgacccagcagcatagactacagtgccgtgccact
gccacacacactgacgtcctcaagggtgggtttgtgtttaggatccgagtggcctatcaa
cgggagccacagatcctgaaggtggtgcggagccctgaggggatgatctctatgagagac
acacctgcctccctccgccttgagagagacaccaggctgctgcccttgctcaccagtgcc
ctgcatggactccagcagcagtacccagccttctcaggtgtggctcgcctggccaagcgg
tgggtgcgtgcccagcttctaggcgagggcttcactgatgagagcctggatctggtggcc
gcttcgctcttcctccaccctgagcccttcacccctcccagtgtcccccaggttggcttt
cttcggttcctttacctgatatctacctttgattggaagaacaaccctcttattgtcaat
ctcaacagtgagttgactgctgaggaacaggtggagattcgaagtagtttcctggcagct
cgaacacagctcccagtcatggtcatcgttaccccccaagaccgcagaagctctgtgtgg
acacaggatggaccctctgcccagatccttcagcagcttgtgagcctggcggctgaagcc
ctgcccatcctggaaaagcagctgatggatccccgagggcctggggacattaggacagtg
ttccggccacccttcgacatatatgatgtgctgatccacctgactccccgccacatcccc
cggcaccgccaagctgtggaccctccagccgcttccttctgccgtggtctggtcactgag
cccgggccttcgtctctgatgcctgtcctgggctatgatccccctcagctctatctggca
cagctcagggaggcctttggagatctggctcttttcttctatgaccagcatggtggagag
gtgattggtgttctctggaagcccagcagcttccagccccagccctttaaggcctccagc
ctaaagggacgcatggtggtgtctcgaggtggggagctcgtgacggtgcccaacatagaa
gcgatcttggaggactttgctgtgttgggtgaaggcctggtacaggctgtagaggcccga
agtgagaggtggactgtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (28)   

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