KEGG   Rattus norvegicus (rat): 313216
Entry
313216            CDS       T01003                                 
Symbol
Rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
  KO
K10696  E3 ubiquitin-protein ligase BRE1 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    313216 (Rnf20)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     313216 (Rnf20)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   BRE1 proteins
    313216 (Rnf20)
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_3 HrpB7 zf-C3HC4_2 zf-RING_5 zf-RING_2 zf-RING_UBOX zf-rbx1
Other DBs
NCBI-GeneID: 313216
NCBI-ProteinID: NP_001101399
RGD: 1311936
Ensembl: ENSRNOG00000006087
UniProt: D3ZYQ9
Position
5:68771507..68797240
AA seq 973 aa
MSGIGNKRAAGEPGTSVPPEKKTAVEDSGTTVETIKLGGVSSTEELDIRTLQSKNRKLAE
MLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQFDENIRIILKRYDLDQGLGDL
LTERKALVVPEPEPDSDSNQERKDDRERGEGQEPAFSFLATLASSSSEEMESQLQERVES
SRRAVSQIVTVYDKLQEKVDLLSRKLNSGDNLIMEEAVQELNSFLAQENVRLQELTDLLQ
EKHHTMSQEFCKLQGKVETAESRVSVLESMIDDLQWDIDKIRKREQRLNRHLAEVLERVN
SKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAQNRHCELEKLRQDFEEVTTQN
EKLKVELRSAVEEVVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRGTHQRQV
ELIERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLI
SSLQNHNHQLKGEVLRYKRKLREAQSDLNKTRLRSGSALLQSQSSTEDAKDEPTELKQDS
EDLATHSSALKASQEDEVKSKRDEEERERERREKEREREREREKEKEREREKQKLKESEK
ERDPVKDKDKGKHDDGRKKEAEIIKQLKTELKKAQESQKEMKLLLDMYRSAPKEQRDKVQ
LMAAEKKSKAELEDLRQRLKDLEDKEKKENKKMADEDALRKIRAVEEQIEYLQKKLAVAK
QEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKE
ELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRKAMEAAQ
LADDLKAQLELAQKKLHDFQDEIVENSVTKEKDLFNFKRAQEDISRLRRKLETTKKPDNV
PKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNA
AFGANDFHRIYIG
NT seq 2922 nt   +upstreamnt  +downstreamnt
atgtcagggattggaaataaaagagcggctggagagccaggcacatctgtgcccccagag
aagaagacagctgtcgaagattcagggaccacagtggaaacaattaaactaggaggtgtc
tcttcaacggaggaattagacattcgaacactgcaatcgaaaaatcgtaagctagcagaa
atgctagatcagcggcaggccattgaagatgagcttcgggagcacattgagaagctggag
cgacgccaggccaccgacgatgcctcactgttgatcgtgaaccggtactggagccagttt
gatgaaaacatccgcatcatccttaaacgttatgatctggaccagggtttgggagaccta
ctcacagaaaggaaagccttggttgtgccagagcctgagcccgactctgacagtaatcag
gagcgcaaagatgaccgtgagagaggggaagggcaagagccagctttctctttccttgct
actttggctagcagttccagtgaggagatggagtcccagcttcaggagcgcgtggagtcc
tcccgccgtgctgtgtctcagattgtgaccgtctatgataaattgcaagaaaaagtggat
ctcttgtcccggaaactgaacagtggagataacctgataatggaggaagcagtacaggag
ctgaactccttccttgcgcaagagaatgtgaggctccaggaactgacagatctccttcag
gagaagcatcacaccatgtctcaggagttctgtaagctgcagggtaaagtagagacagca
gagtcacgagtgtccgtcttggagtccatgattgatgacctgcagtgggatattgacaaa
attcgaaaaagagaacagcggctcaaccggcatttggctgaagtcctagagcgggtgaac
tcaaaaggctataaagtgtacggagcagggagcagtctctatggaggcacaatcaccatc
aatgcccggaagtttgaggaaatgaatgctgagcttgaggagaacaaagagttggctcag
aaccgacattgtgagctagagaaacttcgtcaagactttgaagaggtcactacacagaat
gaaaagttgaaggtggagttgcggagcgcagtggaggaagtggttaaggaaaccccagaa
tatcgctgcatgcagtcacagttctctgtcctgtacaatgagagtctacagttgaaagct
cacttggatgaagctcggaccctgcttcatggcacccggggaactcaccagcgccaggtt
gaactcattgagcgagatgaggttagtctgcataagaagctgagaactgaagtgattcag
ctggaggataccttggcccaggtccgcaaggagtatgagatgttgaggatagagtttgag
cagacccttgcggccaatgaacaagcaggccccataaaccgggagatgcggcacctcatt
agcagtctccagaaccataaccaccagctgaagggggaggtcctgaggtataagcggaaa
ctcagagaggcacagtctgacctgaacaagacgcgtctgcgcagtggcagtgccctcctg
cagtcgcagtctagtactgaggacgccaaggatgaacccacagagctgaagcaagactct
gaggacctcgccactcattcctcagcattgaaggcctctcaggaggatgaagtgaagtct
aagcgggatgaggaagagagagaacgagaaaggagggagaaagaaagagagagagaacga
gaacgggaaaaggaaaaggagagagaacgagagaaacagaaactgaaagagtcggaaaaa
gagagagatcctgttaaggataaggacaaagggaagcacgatgacgggaggaagaaggag
gcagagatcatcaagcagctgaagactgagctcaagaaagcacaagagagccagaaggag
atgaagctgctcctggacatgtaccgctctgcccccaaggagcagagagacaaagtgcag
ctaatggcggccgagaagaagtcaaaggcagagttggaggatctcaggcaaagactcaag
gatctggaagataaggagaagaaggagaataagaaaatggctgatgaggacgccttgagg
aagatccgggcagtggaagagcagatcgaatacctgcagaagaagctggctgtggccaag
caggaggaagaagctctcctgtctgagatggatgtcacaggacaggcctttgaggacatg
caggagcagaacatccgtttgatgcagcagttgcgggagaaggatgatgcaaacttcaag
ctcatgtcagagcggatcaagtctaatcagatccataagttgcttaaagaggaaaaggaa
gagttagctgaccaggttttgacactgaagactcaggtagatgcccagttacaggtagta
agaaagctggaagagaaggagcacctgcttcagagtaacattggcacaggggagaaggag
ctgggtcttaggactcaagccttagagatgaataaacgcaaggccatggaggcggcccag
cttgcagatgacctcaaagcacagctggaactggctcagaagaagctccatgattttcag
gatgaaattgtggagaacagtgtcaccaaggaaaaggacttgttcaatttcaaacgcgca
caggaagacatctctaggctccgaagaaagctggagacaaccaagaagccagacaacgtg
cccaaatgtgacgagattctgatggaggagataaaggactacaaggcgcggctgacctgc
ccttgctgtaacatgcgtaaaaaggatgcagtacttaccaagtgttttcacgttttctgc
tttgagtgtgtgaagacgcgctatgacactcgccagcgcaagtgtcccaagtgtaacgct
gctttcggtgccaatgatttccatcgcatctacattggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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