KEGG   Rattus norvegicus (rat): 313233
Entry
313233            CDS       T01003                                 
Symbol
Galnt12
Name
(RefSeq) polypeptide N-acetylgalactosaminyltransferase 12 precursor
  KO
K00710  polypeptide N-acetylgalactosaminyltransferase [EC:2.4.1.41]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00512  Mucin type O-glycan biosynthesis
rno00514  Other types of O-glycan biosynthesis
rno01100  Metabolic pathways
Module
rno_M00056  O-glycan biosynthesis, mucin type core
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    313233 (Galnt12)
   00514 Other types of O-glycan biosynthesis
    313233 (Galnt12)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:rno01003]
    313233 (Galnt12)
Enzymes [BR:rno01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.41  polypeptide N-acetylgalactosaminyltransferase
     313233 (Galnt12)
Glycosyltransferases [BR:rno01003]
 O-Glycan biosynthesis
  Mucin-type
   313233 (Galnt12)
SSDB
Motif
Pfam: Glycos_transf_2 Ricin_B_lectin Glyco_transf_7C Glyco_tranf_2_2 RicinB_lectin_2
Other DBs
NCBI-GeneID: 313233
NCBI-ProteinID: NP_001413928
RGD: 1562001
Ensembl: ENSRNOG00000008099
Position
5:66180171..66208931
AA seq 576 aa
MWGRAVRRRCPRGLRRGREALLALLALAGLGAVLRARSRSGTVDPVPTRTPHPGRHEPVL
PRPPLPADALGAKGEAVRLQLQGEELRLQEESVQRHQINIYLSDRISLHRRLPERWNPLC
REVKYDYDNLPKTSVVIAFYNEAWSTLLRTVYSVLETSPDILLEEVILVDDYSDREHLKE
PLANELSQLPKVRLIRASKREGLVRARLLGASAARGEVLTFLDCHCECHEGWLEPLLQRI
HEKESAVVCPVIDVIDWNTFEYLGNSGEPQIGGFDWRLVFTWHVVPQRERKLMRSPIDVI
RSPTMAGGLFAVSKRYFEYLGSYDTGMEVWGGENLEFSFRIWQCGGTLETHPCSHVGHVF
PKQAPYSRSKALANSVRAAEVWMDDFKELYYHRNPQARLEPFGDVTERKKLRAKLQCKDF
KWFLDTVYPELHVPEDRPGFFGMLENRGLRGYCLDYNPPSENNVEGHQVLLYLCHGMGQN
QFFEYTSRQEIRYNTRQPEACIAVEEGKDVLIMDLCKDTVPENQEFVLQEDGTLVHKQSG
KCVEATEKEFDTSFAPHLRDCSSSDNQRWLFKERMS
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgtgggggcgtgcggtgaggaggcgctgcccgcgggggctgcggcgcggccgggaggcg
ttgctggcactgctggccctggctgggctgggcgccgtgctgcgggctcgaagtaggtcg
gggacggtggacccggtacccactcggactcctcaccccgggcgtcacgagccggtgctg
cccaggcctccgctgcccgccgatgctctgggagcgaagggggaggccgtgcggctgcag
ctgcagggcgaggagctgcggctgcaggaggagagtgtgcagcggcaccagatcaacatc
tatctgagcgaccgaatctcgctgcaccgccgcctgcccgagcgctggaaccctctgtgc
agagaggtgaaatatgattatgataacctgcccaagacatctgttgtcatagcattttat
aatgaagcctggtccacactccttcggacagtttacagtgttctcgagacttcccctgac
atcctgctggaggaggtcattctggtagatgactacagtgacagagagcacctgaaggag
cccctggccaacgagctgtcacagctgcccaaggtgcgcctgatccgtgctagcaagaga
gagggcctggtgcgagcccggctcctgggagcctccgcggccaggggcgaagtgctgaca
tttctggactgtcactgtgaatgtcatgaggggtggctggagcctctgctgcagaggatc
catgagaaggagtcggctgtggtgtgccccgttatcgatgtcattgactggaacaccttt
gagtacctgggcaactccggagagccccagattggaggctttgactggcggctggtattc
acgtggcatgtggtcccccagcgagagcggaagttgatgcggtctcctattgacgttatc
aggtctccaactatggctgggggactgtttgctgtgagtaagagatattttgaatatctg
gggtcttatgatacaggaatggaagtctggggaggagaaaaccttgaattctcctttagg
atctggcagtgcggtggcactctggaaacacacccttgctcccacgtgggccacgtcttc
cctaagcaagctccctattctcgcagcaaggctctagccaacagtgtccgcgctgcagaa
gtgtggatggatgactttaaagaactctactaccacagaaatccccaggcccgcctggaa
ccctttggggacgtgacagagagaaagaagcttcgggccaagctccagtgtaaagacttc
aagtggttcctggatacagtgtacccagaactgcatgtgccagaggacaggcctggtttc
ttcgggatgctcgagaacagaggactaagggggtactgcctggattataaccctcccagt
gaaaacaatgtggaaggccaccaggtccttttgtacctctgccacgggatgggtcagaac
cagtttttcgagtatacatcccggcaagaaatacgatataacacccgccagcccgaggcc
tgcatagcagtggaggaagggaaggacgtccttatcatggatctctgcaaagataccgtt
ccggagaatcaggagttcgtcctacaggaggacggcacgttagtccacaagcagagcggg
aaatgtgtggaggccacggagaaggagttcgacacttcctttgctccgcacttgcgggat
tgtagcagctcagacaaccagaggtggctcttcaaggagcgcatgtcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (1)   
   KEGG COMPOUND (1)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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