KEGG   Rattus norvegicus (rat): 313264
Entry
313264            CDS       T01003                                 
Symbol
Trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
  KO
K10607  tripartite motif-containing protein 32 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    313264 (Trim32)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    313264 (Trim32)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     313264 (Trim32)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    313264 (Trim32)
SSDB
Motif
Pfam: NHL zf-RING_UBOX zf-RING_2 zf-RING_5 zf-C3HC4 zf-C3HC4_2 Baculo_IE-1 zf-B_box zf-C3HC4_4 zf-RING_4 zf-RING_11 FAM184 Zn_Tnp_IS1595 TRAF3_RING
Other DBs
NCBI-GeneID: 313264
NCBI-ProteinID: NP_001012103
RGD: 1305238
Ensembl: ENSRNOG00000010303
Vega: OTTRNOG00000000891
UniProt: Q66H79 A0A8I5ZWV9
Position
5:84020604..84031483
AA seq 655 aa
MAAAAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGV
RCPFCSKITRITSLTQLTDNLTVLKIIDTAGLSEAVGLLMCRACGRRLPRQFCRSCGLVL
CEPCREADHQPPGHCTLPVKEAAEERRRDFGEKLTRLRELTGELQRRKAALEGVSRDLQA
RYKAVLQEYGHEERRVQEELARSRKFFTGSLAEVEKSNSQVVEEQSYLLNIAEVQAVSRC
DYFLAKIKQADVALLEETADEEEPELTASLPRELTLQDVELLKVGHVGPLQIGQAVKKPR
TVNMEDSWAVEEGAASSASASVTFREMDMSPEEVVPSPRASPAKQRSSEAASSIQQCLFL
KKMGAKGSTPGMFNLPVSLYVTSQSEVLVADRGNYRIQVFNRKGFLKEIRRSPSGIDSFV
LSFLGADLPNLTPLSVAMNCHGLIGVTDSYDNSLKVYTLDGHCVACHRSQLSKPWGITAL
PSGQFVVTDVEGGKLWCFTVDRGAGVVKYSCLCSAVRPKFVTCDAEGTVYFTQGLGLNVE
NRQNEHHLEGGFSIGSVGPDGQLGRQISHFFSENEDFRCIAGMCVDARGDLIVADSSRKE
ILHFPKGGGYSVLIREGLTCPVGIALTPKGQLLVLDCWDHCVKIYSYHLRRYSTP
NT seq 1968 nt   +upstreamnt  +downstreamnt
atggctgcggctgcagcagcgtctcacctgaacctggatgccctccgggaagtgctagaa
tgtcccatctgcatggaatccttcactgaagagcagctgcggcccaagctgctgcactgt
ggccataccatctgccgccagtgtctggagaagctcctggccagtagcatcaatggtgtc
cgctgtcccttttgcagcaagattactcgcatcaccagcctgacccagctgaccgacaac
ctgacagtgctgaagatcattgacacagccggcctcagtgaggccgtcgggctgctcatg
tgccgagcctgtggcaggcggctgcctcggcagttctgccgaagctgtggtttggtgttg
tgtgaaccctgccgagaggcagatcaccaacctcctggccactgcacactccctgtcaag
gaggcagctgaggaacgtcggagggactttggggagaagttgactcgtctaagggaactt
actggagagctgcaaaggaggaaggcagctttagagggtgtctctagagatcttcaggca
aggtataaggctgttcttcaagaatatggccacgaggaacgcagggtccaggaagagcta
gcccgctctcggaagttcttcacaggctctttggctgaggttgagaagtccaacagccaa
gtagtagaggaacagagctacctactcaacattgcggaggtgcaggccgtgtctcgctgt
gactactttctagccaagatcaagcaagctgatgtagcactcctggaggagacagcagat
gaggaggagccagagctcactgcaagcctaccccgggagcttaccctgcaagatgtggag
cttcttaaagtaggacatgttggtcctctgcaaattggccaggctgttaagaagccccgg
acagttaacatggaagattcctgggcagtggaggagggagcagcatcttctgcctcagcc
tctgtaacctttagagagatggacatgagccctgaagaagtagttcccagccctagggct
tcacctgcgaaacagcggagttctgaggcagcctccagtatccaacagtgtctctttctc
aagaagatgggagcgaaaggcagcactccaggcatgttcaaccttccagtcagtctctat
gtgaccagtcagagtgaggtgctggttgcagaccggggcaactatcgcatacaagtgttc
aaccgcaaaggctttttgaaggagatccgccgcagccccagtggcattgacagctttgtg
ctaagcttccttggagccgacttgcccaatctcactcctctttcagtggccatgaactgc
catgggctgattggtgtcactgacagctatgacaactcccttaaagtctataccttggat
ggccactgtgtggcctgtcacaggagccagctgagcaaaccatggggcatcacagcccta
ccgtctggccagtttgttgtgactgatgtggaaggcgggaagctctggtgtttcactgtg
gaccgaggagctggagtagtcaaatacagctgcctctgcagtgctgtgaggcccaagttt
gtcacctgtgatgctgaaggcacagtctatttcacccaaggcttgggtctcaatgtggaa
aaccgacagaatgaacaccacctggagggtggcttctccatcggctctgtgggccccgat
gggcagctgggccgacagatcagccacttcttctctgagaatgaagatttccgctgcatc
gctggcatgtgtgtggatgctcggggtgacctcattgtggctgatagcagccgcaaggaa
atcctccattttcccaagggcggtggctacagcgtccttattcgagagggccttacctgt
ccagtgggcatcgccctcacacccaaggggcagctgctggtcttggactgttgggatcac
tgtgtcaagatctacagctaccatctgagaagatactctaccccttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (14)   
   Pfam (14)   
All databases (37)   

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