KEGG   Rattus norvegicus (rat): 313323
Entry
313323            CDS       T01003                                 
Symbol
Psip1
Name
(RefSeq) PC4 and SFRS1-interacting protein
  KO
K25057  PC4 and SFRS1-interacting protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    313323 (Psip1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    313323 (Psip1)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    313323 (Psip1)
SSDB
Motif
Pfam: LEDGF PWWP
Other DBs
NCBI-GeneID: 313323
NCBI-ProteinID: NP_786941
RGD: 631439
Ensembl: ENSRNOG00000011498
UniProt: Q812D1
Position
5:complement(102892929..102925191)
AA seq 528 aa
MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFP
YSENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSSQQVSTKQSNASSDVEAEEKETSVSKE
DTDQEEKASNEDVTKAADITTPKAARRGRKRKAEKQVDTEEAGVVTAATASNVKASPKRG
RPAATEVKIPKPRGRPKVVKQPCPSESDMVIDEDKSKKKGPEEKPPKKQLKKEEEGQKEE
EKPRKEPDKKEGKKEVESKRKNLAKPGVTSTSDSEEDDDQEGEKKRKGGRHFQAAHRRNM
LKGQHEKEAADRKRKQEEQMETEQQTKDEGKKPEVKKVEKKRETSMDSRLQRIHAEIKNS
LKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNK
FKNMFLVGEGDSVITQVLNKSLAEQRQHEEANKTKDQGKKGPNKKLEKEQTGTKSLNGGS
DAQESNHPQHNGDSAEESKDSREAGSKTKTPGEEREAEVSLKESTLDN
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgactcgcgatttcaaacctggagacctcatcttcgccaagatgaaaggttatcctcat
tggccagctcgagtagatgaagttcctgatggagctgtaaaaccacccacaaacaaacta
cccattttcttttttggaacccacgagactgcttttttaggaccaaaggacatatttcct
tattcagaaaataaggaaaagtatggcaaaccaaataaacgaaaaggttttaatgaagga
ttgtgggagatagataacaatccaaaagtgaaattttcaagtcaacaggtatcaaccaaa
cagtcaaatgcatcatctgatgttgaagcggaagaaaaagaaactagtgtttcaaaggaa
gatactgatcaggaagaaaaagccagcaatgaagatgtgactaaagcagctgacataacc
actccaaaagctgccaggcgaggaagaaagagaaaggctgaaaaacaagtagacactgaa
gaggcaggagtggtgactgcagcgaccgcttccaatgtgaaagcaagtcctaagagagga
cggcctgcagctactgaagtcaagattccaaaaccaagaggcagacctaaagtggtaaaa
cagccctgtccgtcagaaagtgacatggttattgatgaagacaaaagtaaaaaaaagggg
ccagaggaaaaaccacccaaaaagcagcttaaaaaggaggaagaaggccaaaaggaagaa
gagaagccaagaaaagaaccagataagaaagaggggaagaaagaagtcgaatctaaacgg
aaaaatttagctaaaccaggggttacgtcaacctctgattcagaagaagatgatgatcaa
gaaggtgaaaagaagagaaagggtggaagacacttccaggctgctcacaggaggaacatg
ctaaaaggccaacatgagaaagaagctgcagatcggaaacgcaagcaggaggaacaaatg
gagactgagcagcagactaaagatgaaggaaagaagccagaagttaagaaagtggagaag
aagcgagaaacatcaatggattctcgacttcaaaggatacatgctgaaattaaaaattca
ctcaaaattgataatctagatgtgaacagatgcattgaggcactggatgaactcgcttca
cttcaggtaacaatgcaacaagctcagaaacacacagagatgatcacaaccctgaagaaa
atccggcggttcaaagtcagtcaagttatcatggagaagtctacaatgttgtataacaag
tttaagaatatgtttttggttggtgaaggggattccgtcatcacccaagtgctaaacaaa
tctcttgctgaacaaagacagcatgaggaagcaaataaaaccaaagatcaagggaagaaa
gggccaaacaaaaagctagaaaaggaacaaacaggtacaaagagcctaaatggaggatct
gatgctcaggaaagtaatcatccacaacataatggtgacagtgcggaagaaagcaaagac
agccgtgaggccggcagtaagacaaagacacctggagaagagagagaggctgaagtatct
ctgaaggagtctaccctagataactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (17)   
   RefSeq(nuc) (9)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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