KEGG   Rattus norvegicus (rat): 313370
Entry
313370            CDS       T01003                                 
Symbol
Hook1
Name
(RefSeq) protein Hook homolog 1
  KO
K16612  protein HOOK1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    313370 (Hook1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    313370 (Hook1)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   FTS/Hook/FHIP (FHF) complex
    313370 (Hook1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Hook proteins
     313370 (Hook1)
SSDB
Motif
Pfam: HOOK HOOK_N Tropomyosin MscS_porin TPR_MLP1_2 HAUS-augmin3 GAS Nup54
Other DBs
NCBI-GeneID: 313370
NCBI-ProteinID: NP_001101416
RGD: 1309987
Ensembl: ENSRNOG00000026226
UniProt: A6JRI4 D3ZB48
Position
5:115940199..116003482
AA seq 728 aa
MEDPQPLPQPELPLCDSLIIWLQTFKTASPCQDVKQLTNGVTMAQVLHQIDVAWFSESWL
SRIKDDVGDNWRIKASNLKKVLHGITSYYHEFLGQQISEELIPDLNQITESSDPVELGRL
LQLILGCAVNCEKKQEHIKNIMTLEESVQHVVMTAIQELMSKEIVSSPASDAVGELEQQL
KRALEELQEALAEKEELKQRCQELDMQVTALQDEKNSLVSENEMMNEKLDQLDGSFDDPN
TMVAKKYFHVQLQLEQLQEENYRLEAAKDDYRVHCEELEKQLIEFQHRNDELTSLAEETR
ALKDEIDVLRATSDKANKLESTVEVYRQKLQDLNDLRKQVKSLQETNMMYMHNTVSLEEE
LKKANAARAQLETYKRQVQDLHTKLSSESKRADTLAFEMKRLEEKHETLLKEKERLIEQR
DTLKETNEELRCSKAQQDHLNQADSSATKSYENLAAEIMPVEYREVFIRLQHENKMLRLQ
QEGTENERIEQLQEQLEQKHRKMNELETEQRLSKERIGELQQQIEDLQKSLQEQGSKSEG
ESSSKLKQKLEAHMEKLTEVHEELQKKQELIEDLQPDISQNAQKISELEAALQKKDEDMK
AMEERYKMYLEKARNVIKTLDPKLNPASAEIMLLRKQLAEKDRRIEILESECKVAKFRDY
EEKLIVSAWYNKSLAFQKLGMESRLVSGASACKDSVAAAPARSFLAQQRHITSTRRNLSV
KVPAAASD
NT seq 2187 nt   +upstreamnt  +downstreamnt
atggaggacccgcagccgctgccacagcctgagctgccgctgtgtgacagcctcatcatc
tggctgcagacatttaagactgcctcaccctgtcaagatgtcaaacagctgactaatgga
gtgaccatggcacaagttcttcatcaaattgacgtagcttggttcagcgaatcttggtta
agccgaattaaagatgatgttggagacaactggagaataaaggctagtaacctaaagaag
gtcctccatggaattacaagttactatcatgagtttttggggcagcagatttctgaagaa
cttattcctgatttaaatcaaataactgagagctcagatcctgtggagcttgggagattg
cttcagctaattctaggatgcgcagtcaactgtgagaagaaacaagaacatattaaaaat
ataatgaccctggaagaatctgttcaacatgtggtcatgactgcaattcaggagttgatg
agtaaagaaatagtgagctctcctgcaagtgacgctgtaggagaattagagcagcagcta
aaaagggctttagaagagcttcaggaggccctagcagaaaaggaagagctgaagcagagg
tgccaggaactggatatgcaggtaactgcacttcaggatgagaagaattccctggtctct
gagaatgagatgatgaatgaaaagcttgaccagttggatggctcttttgatgacccaaat
acaatggttgcaaagaagtattttcacgtacagctgcaactagaacaattacaagaagaa
aactatagacttgaagctgcaaaagatgattaccgtgttcactgtgaggaactggaaaag
cagctgattgaatttcagcacaggaacgatgagctgacgagccttgctgaggagaccaga
gccctaaaagacgagatagatgttcttagggctacctcagacaaagcaaataagctggag
tcaacagtggaggtgtatcgtcagaagctccaggacctaaatgacctccgcaagcaggtg
aaatccttacaggagacaaatatgatgtatatgcacaacactgtgagcttggaagaagag
ctgaagaaggccaatgcagctcgtgcacagctagagacctataagcgccaggttcaggac
cttcacactaagctttcctctgaatccaaaagggcagatacactagcattcgaaatgaag
aggcttgaagagaaacacgaaactttactcaaggaaaaagagcgattgatagaacagcgt
gacactctgaaagagacgaatgaggagctgcggtgctcaaaagcacaacaagatcaccta
aatcaagctgattcatctgctacaaaaagttatgaaaatcttgctgctgagatcatgcca
gtggagtacagagaggtgttcattcgactccagcatgaaaacaaaatgcttcgcctgcag
caagaagggacggagaatgagcgcatcgagcagctgcaggagcagttggaacagaaacac
cgcaagatgaacgagctggaaactgagcaaaggttgagcaaagagcgcattggagaacta
cagcagcaaattgaggacctccagaagtcgttacaagaacagggctctaagtctgaaggt
gaaagttccagcaaattaaagcagaagttggaagctcatatggaaaaactaacagaagtc
catgaagaattacagaagaaacaggagctcattgaagaccttcagccagatataagtcag
aatgcccaaaagatcagtgaacttgaagcggctcttcagaagaaagatgaagacatgaaa
gcgatggaggagagatacaaaatgtacttagagaaagccaggaatgtcattaaaacttta
gatcccaaattaaatccagcatcagcagaaataatgttactgagaaagcagctggcggag
aaggacagaagaattgaaattctagagagtgaatgtaaagtggcaaaattcagggattat
gaggaaaaactcattgtttctgcctggtataacaagagcctggcctttcagaaactgggc
atggaatctcggctggtgagcggtgctagtgcttgcaaagacagcgtcgcggctgctccc
gcgcgctccttcttagcacagcagcggcacatcaccagcacccgaagaaacctctctgtg
aaagtcccagctgcggcgtctgactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system