KEGG   Rattus norvegicus (rat): 313409
Entry
313409            CDS       T01003                                 
Symbol
Dnajc6
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin
  KO
K09526  DnaJ homolog subfamily C member 6
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    313409 (Dnajc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    313409 (Dnajc6)
   03110 Chaperones and folding catalysts [BR:rno03110]
    313409 (Dnajc6)
   04131 Membrane trafficking [BR:rno04131]
    313409 (Dnajc6)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    313409 (Dnajc6)
Chaperones and folding catalysts [BR:rno03110]
 Heat shock proteins
  HSP40 / DNAJ
   313409 (Dnajc6)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    313409 (Dnajc6)
SSDB
Motif
Pfam: PTEN_C2 DnaJ Y_phosphatase
Other DBs
NCBI-GeneID: 313409
NCBI-ProteinID: NP_001402850
RGD: 1309900
Ensembl: ENSRNOG00000052887
UniProt: D4A0I5 A6JRN8
Position
5:121232532..121398775
AA seq 968 aa
MSLLGSYRKKTSSDGYESLQLVDSHGDSSARGAAAGTQRVTTGAVRSPARQPPHRASTTD
SSGASSPDMEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTLKDTSSRVIQSVSSYTKGDLD
FTYVTSRIIVMSFPMDSVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFHSRV
SECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLY
STPGPAVRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKAITVSPIPFFN
KQRNGCRPYCDVLIGETKIFSTCTDFERMKEYRVQDGKIFIPLNITVQGDVIVSMYHLRS
TIGSRLQAKVTNTQIFQLQFHSGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVTLDIEV
QPQDKVIDLTPPWEHYCTKDVNPSILFSSQQEHQDTLALGGQAPADLPPDHPRNLGQGGF
FASLCWQDQKSEKSRCEEDHAALVNQESEQSDDELLTLSSPHGNADGDKPHGAKKPGKKQ
QEPAAPPPPEEVDLLGLEGSDVSTNFSPLAAPPSNSELLSDLFGGGGATGPAQAGQVGVE
DVFHPSGPASAQSTPRRATTSASASPTLRVGEGATFDPFGAPAKPPGQDLLGSFLNTSNA
SSDPFLQPTRSPSPTVHASSTPAVNIQPDIAGGWDWHAKPGGFGMGSKSAATSPTGSTHG
TPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQP
AGYNWQQAQPKPQSSMPHSSPQNRPNYNVSFSAMPAGQSDRGKGSTNLEGKQKAADFEDL
LSSQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLW
AGETKWKPVGMADLVTPEQVKKVYRRAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFE
NQGQKPLY
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgagcctcctcgggagctaccggaaaaagaccagcagcgatggttatgaatctttgcag
ctggtggacagtcacggggactcgagcgcacggggcgcggcggctggcacgcagagggtg
accacgggcgcggtgcgtagtcccgcccggcagcctccgcaccgcgccagcaccacggac
agctcaggtgcctcatctccagacatggagcccagctatgggggaggcctttttgatatg
gtgaaaggtggtgcaggtaggctattcagtaacctgaaggacaacttgaaagacaccctc
aaagatacatcctccagagtcatccagtctgttagcagctacacaaagggagacctagac
tttacttatgtcacttccaggattatcgtgatgtcctttcctatggacagtgttgacata
ggattcaggaatcaggttgatgacatccgtagctttttggattccagacatcttgaccac
tacacagtatacaacttgtcacccaagtcttaccgaactgccaagttccacagccgggtc
tcagagtgcagttggcccatcaggcaggccccaagtctacacaacctgtttgctgtgtgt
cggaatatgtataactggctgctgcagaatcccaaaaatgtctgtgttgtccactgcttg
gatggacgggccgcatcatcaattctggttggtgctatgttcattttctgtaatctctac
tctacgcctggccctgctgttcgattactctacgcaaagcgaccaggaattggactgtct
ccgtcccacaggaggtacttaggctacatgtgtgacctacttgcagataagccctaccgt
cctcacttcaagccgctcacaatcaaggcaatcactgtcagcccaattcccttcttcaat
aaacagaggaatgggtgccgcccttactgtgacgtactgattggagaaactaaaatattc
tcaacatgcacagacttcgaacgaatgaaagaataccgtgtccaagatgggaaaatcttc
atccctctgaacatcacagtccaaggtgacgtcattgtttccatgtaccacttgcggtca
accatcgggagccggctgcaggctaaggtgaccaacacacagatattccagctccagttt
cattctggatttataccactggacacaacagttttaaagttcaccaagcctgagttggat
gcatgtgatgtaccagaaaaatatcctcagctgttccaagtgacactggatatagaagta
cagccccaagacaaagtgatcgacctaactccaccatgggagcactactgcacaaaggat
gtgaaccccagcatcctcttctcctctcagcaggagcatcaggatactctggccttaggg
ggtcaggctccagcagatctccctccagaccatccgaggaatcttgggcaaggaggcttc
tttgcctctctgtgttggcaagatcagaaatcagagaagtcacggtgtgaggaggaccac
gcagccctggtgaatcaggaaagcgagcagtcggatgatgaactactgactctctcaagc
ccacatggcaatgctgatggtgacaagcctcatggagccaagaagcctggcaaaaagcag
caggagccagctgcgcctcctcccccagaggaggtggaccttctgggcctggaagggtcc
gatgtgagcacgaacttctcccccttggcagctcctcccagcaattctgaactgctgagt
gacctgtttgggggtggaggtgccacaggtcctgcccaggcaggacaggttggagtcgaa
gatgtgtttcacccaagtggacctgcgtctgcgcagtccacaccacgccgagccaccact
tccgcctctgcatcgccaaccctaagagtgggagaaggtgccacctttgacccttttgga
gcccctgctaagccaccaggtcaggatttgttgggctccttcctgaacacatccaatgct
tctagcgacccctttctgcagcccacgagaagcccttcccctacagtgcatgcttctagc
actcctgctgtgaacatccaaccagacattgctggaggttgggactggcatgccaaacca
ggaggttttgggatgggaagcaaatcggctgccaccagcccaacaggctcaacacacggc
acccctacccatcagagcaagccccagactctggatcccttcgctgacttggggacacta
ggcagctcttcatttgccagcaaacccaccacaccaactggattgggtggaggatttcca
cctctcagctcaccacagaaagcgtccccacagcccatgggtggagggtggcagcagcca
gccggctacaactggcagcaggcacagcctaagccacagtctagtatgcctcactcctcc
cctcagaaccgacccaattacaacgtgagcttctcagctatgcctgcagggcagagcgac
cgtggaaaaggatctactaacttagaaggaaaacagaaggctgctgactttgaagatctg
ctttccagtcaaggcttcaatgcccacaaagacaaaaaggggcctcgaacaatagctgag
atgagaaaggaggaaatggctaaggaaatggatcctgagaaactgaagatcctggagtgg
atagaaggcaaagagagaaacatcagagccctgctttccacaatgcacactgtgctgtgg
gctggggagaccaagtggaaacctgtgggcatggcagacctggtgacgccagagcaagtg
aagaaggtgtacaggagagccgtgctagtggtgcaccccgacaaggctactgggcaaccc
tatgaacaatatgcaaagatgatcttcatggagctaaatgatgcctggtccgaatttgaa
aaccaaggccaaaagcccttgtattaa

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