KEGG   Rattus norvegicus (rat): 313450
Entry
313450            CDS       T01003                                 
Symbol
Rnf113a1
Name
(RefSeq) E3 ubiquitin-protein ligase RNF113A
  KO
K13127  RING finger protein 113A
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    313450 (Rnf113a1)
Spliceosome [BR:rno03041]
 Complex C
  Other components
   Complex C specific factors
    313450 (Rnf113a1)
SSDB
Motif
Pfam: zf-CCCH zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf_CCCH_4 zf-RING_10 zf-CCCH_4 zf-CCCH_2 zf-Nse zf-C3HC4_4 Prok-RING_4 zf-P11
Other DBs
NCBI-GeneID: 313450
NCBI-ProteinID: NP_001014791
RGD: 1359693
Ensembl: ENSRNOG00000066548
Vega: OTTRNOG00000002023
UniProt: Q5PPN1
Position
X:121293621..121294844
AA seq 341 aa
MAEQLSPGNSTGKVCTFLFKKPGRKGTAGRRKRPLCDEGSGDSGSSSDEGSAVVRPEKKQ
ATHNPMIQKTRGSAKQKTNYGGLSSEDENEPEGLGVTYKSTRSAKPVGPEDMGATAVYEL
DTEKERDAQSIFERSQKIQEELRGKEDDKIYRGINNYQKYVKPKDTSMGNASSGMVRKGP
IRAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGRYG
VYEDENYEVGSDDEEIPFKCFICRQTFQNPVVTKCRHYFCESCALQHFRTTSRCYVCDQQ
TNGVFNPAKELIAKLGKHRAEAEGAASDFLEDPEESPVSII
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggcggagcaactttctccagggaattctaccggtaaggtgtgcacttttctcttcaaa
aagcctggccggaaaggaacggctggccgccgaaagcgcccgctctgtgatgaggggtcc
ggggacagcggcagcagcagtgacgaaggcagcgctgtggtccgccccgagaagaagcag
gctacccacaacccgatgatacagaagacgcgtggcagcgctaaacagaagacaaactac
ggcggtttgagtagtgaggatgagaatgaacctgagggtcttggcgtgacctacaagtct
acccgttcagcaaaacccgtagggcccgaagatatgggggcgaccgctgtctatgaactg
gacactgagaaggaacgagatgcacagtccatctttgagcggagccagaagatccaggag
gagctgaggggcaaggaagatgacaagatctatcggggaatcaataattatcagaaatac
gtgaagcccaaggatacatctatgggcaatgcttcctccgggatggtgaggaaaggcccc
atccgagcccctgagcatctacgtgccaccgtgcgctgggattaccagcccgacatctgc
aaggactacaaggagactggattctgcggcttcggggacagctgcaaattccttcatgac
cgttcagattacaagcacgggtggcagatcgaacgtgagcttgatgagggtcgctatggc
gtctatgaggatgaaaactatgaagtgggaagcgatgatgaggaaataccattcaaatgt
ttcatctgtcgccagaccttccaaaatccagttgttaccaagtgtaggcattatttctgc
gagagctgtgcactgcagcatttccgcaccacctcgcgctgctatgtctgtgaccagcag
accaatggcgttttcaatccagcgaaagaattgattgctaaacttggaaagcatcgagct
gaagcagagggtgctgcctctgatttcctagaagacccagaggagagtccagtttccatt
atttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (15)   
   Pfam (15)   
All databases (32)   

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