KEGG   Rattus norvegicus (rat): 313539
Entry
313539            CDS       T01003                                 
Symbol
Kdm4a
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    313539 (Kdm4a)
Enzymes [BR:rno01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     313539 (Kdm4a)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     313539 (Kdm4a)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    313539 (Kdm4a)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H PHD Herpes_pp85 Tudor_5 53-BP1_Tudor LBR_tudor DUF4537
Other DBs
NCBI-GeneID: 313539
NCBI-ProteinID: NP_001101436
RGD: 1306378
Ensembl: ENSRNOG00000019956
UniProt: A6JZG4 D4A2N4
Position
5:complement(136958178..137004942)
AA seq 971 aa
MTVREFRKIANSDKYCTPRYSEFEELERKYWKNLTFNPPIYGADVNGTLYEQHVDEWNIG
RLKTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSV
PPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITF
PYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRRFQPERYKL
WKAGKDSTVIDHTLPTPEAAEFLKDSGLTPRAGNEECPEEDSEAAEQGEEGDVKRSLAKH
RIGTKRHRVCLEIPQEVSQSELFPKEELSSGQYEMTECQATLAPVRPTHSSVRQVEDSLP
FPDYSDPTEVKFEELKNVKLEEEDEDEEPEAAALDLSVNPESVEGRLVFSGSKKKASSSL
GSSSSQDSVSSDSETTESVSCQGQEKTVLTVHSYSRGDGKAAPGEPSVKRQRSAPRSISE
QELAEVADEYMLSLEENKKTKGRRQPLSKLPRHHPLVLQECGSDDETSEQLTPEEEAEET
EAWAKPLSQLWQNRPPNFEAEKEFNELMAQQAPHCAVCMIFQTYHQVEFGGFSQSCGNAS
EPAAQPQRTKPLIPEMCFTTTGCSTDINLSTPYLEEDGTSMLVSCKKCSVRVHASCYGVP
PAKASEEWMCSRCSANALEEDCCLCSLRGGALQRANDDRWVHVSCAVAILEARFVNIAER
SPVDVSKIPLPRFKLKCVFCKKRRKRNAGCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDW
PFVVFITCFRHKIPNLERAKGALLSITAGQKVISKHKNGRFYQCEVVRLTTETFYEVNFD
DGSFSDNLYPEDIVSQDCLQLGPPAEGEVVQVRWTDGQVYGAKFVASHPIQMYQVEFEDG
SQLVVKRDDVYTLDEELPKRVKSRLSVASDMRFNEIFTEKEVKQEKKRQRVINSRYREDY
IEPALYRAIME
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgactgttcgtgagttccgcaagatcgccaatagtgacaagtactgtactccacggtat
agtgaatttgaagaacttgagcgtaaatactggaaaaacctcacattcaatcctcccatc
tatggagcagatgtgaatggtactctctatgaacagcacgttgatgagtggaacatcggc
cggctgaagaccatcctggacctggtggagaaggagagtgggatcaccatcgagggcgtg
aacaccccctacctgtactttggcatgtggaagacgtcctttgcctggcacacggaagac
atggatctgtacagcatcaactacctgcactttggagagccaaagtcttggtactctgtt
ccacctgagcatgggaaacgcctggagcggctcgccaaaggctttttcccaggaagtgct
caaagctgtgaggcttttctccgccacaagatgaccctgatctccccattaatgctgaag
aagtatggcattccctttgacaaggtgacccaagaagccggggagtttatgatcactttt
ccatatgggtaccatgctggtttcaaccatggcttcaactgtgcagagtctaccaatttt
gctacccgtcggtggattgaatatggcaagcaggctgtactgtgttcctgcagaaaagat
atggtgaagatctctatggacgtgtttgtcaggaggttccagccggaacgctacaaactt
tggaaagctgggaaagacagcactgttattgaccacactctgcccacaccggaagcagct
gagtttctgaaggacagtggactaaccccaagagctgggaatgaggagtgcccagaggag
gactcggaagcggcggagcagggagaggagggggatgtgaagagaagcctggctaagcac
cgaatagggacaaagagacaccgagtctgtctggaaataccacaggaggtcagtcagagc
gagctcttccccaaggaagagctgagttctggacagtatgagatgacagagtgccaggcc
accctcgccccagtgaggcccacccacagctccgtgcggcaagttgaggacagccttccc
ttcccagattactccgaccccactgaggtcaaattcgaagagctgaagaacgtcaaacta
gaagaggaggatgaggatgaggagccggaagcagctgcactggacctttctgtgaatccc
gagtctgtagaaggacgcctcgtcttctcgggctccaaaaagaaagcctcctccagccta
ggctccagttcctctcaggattcagtttcttcagattccgaaaccaccgagtctgtctct
tgccagggccaagagaaaacagttctcacggtgcacagctactccagaggagatggcaag
gctgccccaggcgagccgagtgtgaagaggcagcgcagcgccccccgcagcatcagcgag
caggagctggcagaggttgcagatgagtacatgctctccctggaggagaataagaagacc
aagggtcgccgccagcccttgagcaagctcccacgccatcacccgctggtgttgcaggag
tgcggcagcgatgacgagacttctgaacagctgacacccgaggaagaggctgaggagacc
gaggcttgggctaagcctctgagccagctgtggcagaaccgacctccaaactttgaggct
gaaaaggaattcaatgagctcatggcccagcaggcccctcactgtgctgtgtgtatgatc
ttccagacctaccatcaggtggaatttggaggcttcagtcagagctgtgggaatgcttca
gaaccagctgcccaacctcagaggactaagccattgatccccgaaatgtgctttaccaca
actggctgcagcacagacatcaatctgtccaccccttacctagaggaggatggcaccagc
atgctggtgtcttgtaagaagtgcagtgtccgggtccacgccagttgctatggcgtcccc
cctgcaaaggcttctgaagaatggatgtgctctcgatgttcagccaatgccctggaggaa
gactgctgtttatgctcactgcgtggaggggccctgcagagagcaaacgacgacagatgg
gttcatgtttcatgtgctgtggcaattctagaagcaaggtttgtcaacattgctgaaaga
agtccagtggatgtgagcaaaatccctctgccccgcttcaaactgaagtgtgtcttttgt
aagaagcgaagaaaacggaatgctggctgttgtgtgcagtgctctcacggccgctgcccc
actgccttccatgtgagctgtgcccaggctgccggggtgatgatgcaacccgatgactgg
ccttttgttgtcttcatcacgtgcttccgccacaagattcccaatttggagcgagctaag
ggagccttgctgagcatcacggccggccagaaggtcatcagcaagcacaagaacggccgc
ttctaccagtgcgaggtggtcagactcaccaccgaaaccttctacgaagtcaactttgat
gacggctccttcagcgacaacctttatcctgaggacatagtgagtcaggactgtctccaa
ctggggcctcctgctgaaggcgaagtggttcaagtcagatggacagatggtcaagtctat
ggggctaagtttgtggcctcccaccccatccagatgtaccaggtggagttcgaggatggc
tcgcagctggtggttaagagagatgatgtatacacactggatgaagagcttcccaagaga
gtcaagtctagactgtcagtagcttcagacatgcggttcaatgagattttcacagagaag
gaagtaaagcaagaaaagaaaaggcaacgggtcatcaactcaaggtaccgggaggattac
atcgagccagcactgtatcgggccatcatggagtag

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