KEGG   Rattus norvegicus (rat): 313587
Entry
313587            CDS       T01003                                 
Symbol
Zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    313587 (Zc3h12a)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     313587 (Zc3h12a)
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 zf-CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 313587
NCBI-ProteinID: NP_001071139
RGD: 1306776
Ensembl: ENSRNOG00000009131
UniProt: A0JPN4 A6IS77
Position
5:complement(142661193..142670051)
AA seq 596 aa
MSDPCGKKLVQEISPTMSLWGLEDRHSCQGQPQPDQDPVAKEASASELQMKVDFFRKLGY
SSSEIHSALQKLGVQADTNTVLGELVKHGSATERECQASTDPCPQPPLVPRGGSTPKPST
VEPSLPEEDKESSDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNWFLERGHTDITVFVP
SWRKEQPRPDVPITDQHILRELEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAYESDGVV
VSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLPSE
HRKQPCPYGRKCTYGIKCRFFHPERPSRPQRSVADELRANALLSPPRTPVKDKSSQRPSP
ASQPNSMSLEAEPGSPDGKKLGTRSSPGPHQEGSTQTCAPAGRSLPVSGGSFGPTEWLPH
TLDSLPYTSQECLDSGIGSLESQMSELWGLRGGSPGESGPTRGPYTGYQTYGSKLPAAPA
FSPFRQAIGTGHFSVPTDYVPPPPTYPAREYWSEPYPLPPPTPVLQEPQRPRPRASGDPW
GRVSDLAKERAGVYTKLCGVFPPHLVEAVMGRFPQLLDPQQLAAEILSYKSQHLSE
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgagtgacccctgtgggaagaaacttgtccaagaaatcagccccaccatgagtctgtgg
gggcttgaggacagacacagctgccaaggtcaacctcagccagaccaggatcctgtggct
aaagaggcctctgcttccgagctgcagatgaaggtggactttttccgtaaactgggatac
tcgtcttctgagatccacagtgccctgcagaagctgggagtccaagcagacaccaacacg
gtgctgggggagctggtgaagcacggttcagctactgaacgagagtgccaggcctccaca
gacccctgcccccagccccctctggtgccccggggtggaagcacccccaagccttccact
gtagaaccctcactcccagaggaggacaaagagagcagtgacctgagaccagtggtcatc
gacggaagcaacgtggccatgagccatgggaacaaagaagtcttctcctgccggggcatt
ttgctggctgtgaactggtttctggagcggggccatacagacatcaccgtgtttgtgcca
tcgtggaggaaggaacagcctcggccagatgtgcctatcacagaccagcacattctgcgg
gaactagagaaaaagaagatcctggtgttcacgccatccaggcgggtcggtggcaagcgt
gtagtgtgctacgatgaccgattcattgtgaagctggcctatgaatccgacggagtggtg
gtgtccaatgacacataccgggacctccaaggcgagaggcaggagtggaagcgcttcatc
gaggagaggctgctcatgtactccttcgtcaatgacaagttcatgccccctgacgaccct
ttaggacgccacgggcctagcctggacaacttcctgcgtaagaaaccactgccttctgaa
cacaggaagcagccatgtccctatgggagaaaatgtacttatggaatcaagtgccggttc
ttccacccggagcggccaagccgcccccagcgctctgtggctgatgagctccgggccaac
gcccttctctcgccccccaggactccagtcaaggacaaaagtagccagaggccttcccct
gcctctcagcccaactccatgtccctagaggctgagccaggcagcccagatgggaaaaaa
ctgggtaccagatcctccccaggcccccaccaagaaggctcaacacagacctgtgctccg
gctggcaggagcctccctgttagtgggggcagctttgggcccacagagtggctcccacac
accctggactcgctcccatacacctcccaggagtgccttgattcaggcattggctccctg
gagagccagatgtcagaattgtgggggttgcgaggaggtagccctggggagtcgggcccc
actcggggtccttatactggttaccaaacctatggatccaagctccctgcagcgcctgcc
ttttctccctttagacaagccatcggtactggccatttcagtgtccccaccgactatgtg
cccccgccacccacctacccagccagagagtactggtctgagccatacccattgccccca
cccactccagtccttcaggagccccagagacccagacccagggccagtggggacccctgg
ggcagggtgagcgacctggccaaagaaagggctggtgtgtataccaagctgtgtggtgtc
tttcccccacacctggtagaagctgtgatgggtcgtttcccacagctcctggacccccag
cagctggccgctgagatcctttcttacaagtcccagcacctcagtgagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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