KEGG   Rattus norvegicus (rat): 313592
Entry
313592            CDS       T01003                                 
Symbol
Col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain isoform X1
  KO
K23455  collagen type VIII alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    313592 (Col8a2)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 313592
NCBI-ProteinID: XP_006238974
RGD: 1305182
Ensembl: ENSRNOG00000010841
UniProt: D4ADG9
Position
5:143870754..143897372
AA seq 699 aa
MQGALMPLPSLLLLLLGCGPRVSSGGGAGGAAGYAPVKYVQPMQKGPVGPPFREGKGQYL
EMPLPILPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGTGKPGVHGQPGPAGPPGFSRMGK
AGPPGLPGKVGPPGQPGLRGEPGIRGDQGVRGPPGPPGLPGPSGITVPGKPGAQGAPGPP
GFRGEPGPQGEPGPRGDRGLKGDNGVGQPGLPGAPGQAGAPGPPGLPGPAGLGKPGLDGL
PGAPGDKGDLGPPGVPGSRGEPGAVGPKGPPGVDGVGIPGAAGVPGPQGPAGAKGEPGLR
GPPGLIGPVGYGMPGKPGPKGDRGPVGAPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPG
SAGLPGRRGPPGSKGEVGPGGPPGVPGIRGDQGPNGLAGKPGLPGERGLPGTQGPPGPTG
PKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKG
EPGLPGPPGEGKVGEPGSAGPTGPPGVPGSPGLTGPPGPPGPPGPPGAPGALDETGIAGL
HLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVRFDRTLYNGHSG
YNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAV
LQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq 2100 nt   +upstreamnt  +downstreamnt
atgcagggggctctgatgcccctgccttcgctgctgttgttgctgttggggtgtgggcca
agagtgtcctctggcggtggagctggcggcgcagctggctatgccccggtaaagtatgtg
cagcccatgcagaaaggaccagtgggaccgcctttccgagagggcaagggccagtacctg
gaaatgcctctaccgatcctgccaatggacttgaaaggagagccaggcccccctgggaaa
ccgggacctcggggtccccctgggcctcctggtttcccaggaaaaccaggcactggaaaa
cctggggtccatggacaaccaggccctgctgggccccctggcttctccaggatgggcaaa
gctggtcctccagggcttccaggcaaggttggaccaccagggcagccagggctgcggggg
gagccagggatacgaggagaccagggtgtccgggggcccccaggaccccctggccttcct
ggtccttcaggtattactgtccctggaaaaccaggtgcccagggagctccagggcctcca
ggatttagaggggagccaggaccccagggagagcctggaccccgaggagataggggcctc
aaaggggataatggagtgggccaaccagggttgcctggggcccctgggcaggcaggtgcc
cctgggcctcctgggctgcctggtccagctggcttgggaaaaccaggtttggatgggtta
ccaggagcccctggagacaagggtgatttggggccccccggggttccaggctctagggga
gagccaggagctgtgggtccaaaagggcctcctggggtagatggtgtggggataccaggg
gcagcgggggtgccagggccacagggtccagcaggggctaaaggggagccagggctccgg
ggcccacctggcttgataggccctgtgggctatgggatgccaggaaaaccaggacctaag
ggagacaggggcccggttggggccccaggcctcttaggagacagaggtgagccaggagag
gatggggagccaggggaacagggtccacagggacttgggggtccacctggccttcctgga
tctgcagggcttcctggtagacgtgggccccctgggtcaaagggagaggtaggacctgga
ggtccaccaggcgtgcctggcattagaggtgaccaagggcctaatggcctggctggtaag
cctgggctccctggtgagaggggacttcctgggacccagggaccccctggaccaactggc
cccaagggtgagccaggttttacaggtcgccctggggggccaggggtggcaggagcccta
ggtcagaaaggtgacttgggccttcctgggcagcctggcttgaggggtccctctggaatc
ccaggactccagggcccagctggccctattgggccccagggtcttccaggcctgaagggt
gaaccaggccttccagggcctcctggagagggaaaagtcggggagcctggctctgcgggt
cccacagggccccctggagtccctggctccccagggctcacaggtcctcctgggccccct
gggcctcctgggcctcctggtgcccccggagccttggatgagactggtattgccggcttg
catctgcccaatggtggcgtggagggggctgtactgggcaaaggaggcaagccacagttt
gggctcggtgagctgtcagcccacgccactccagcctttaccgctgtgctcacttccccg
ttccctgcctcgggcatgccagttaggtttgaccggactctctacaatggccacagcggc
tacaacccagccactggtatcttcacctgccccgtgggaggcgtctactactttgcttac
cacgtgcatgtcaagggcaccaatgtgtgggtagccctgtacaagaacaacgtgcccgcc
acctacacatacgacgaatacaagaagggctatctggatcaggcctccggaggggctgtg
ctccagctgcggcccaacgaccaggtgtgggtgcagatgccgtcagaccaggccaatggc
ctctactccactgagtacatccattcttccttctcagggtttttgctctgtcctacataa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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