KEGG   Rattus norvegicus (rat): 313594
Entry
313594            CDS       T01003                                 
Symbol
Ago1
Name
(RefSeq) protein argonaute-1 isoform 1
  KO
K11593  eukaryotic translation initiation factor 2C
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    313594 (Ago1)
   03036 Chromosome and associated proteins [BR:rno03036]
    313594 (Ago1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     313594 (Ago1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    313594 (Ago1)
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     313594 (Ago1)
   microRNA pathway
    RISC loading complex
     313594 (Ago1)
SSDB
Motif
Pfam: Piwi ArgoMid PAZ ArgoN ArgoL1 ArgoL2
Other DBs
NCBI-GeneID: 313594
NCBI-ProteinID: NP_001178694
RGD: 1304619
Ensembl: ENSRNOG00000055915
Position
5:complement(144006618..144064740)
AA seq 857 aa
MEAGPSGAAAGAYLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIK
PDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGE
GKDRIFKVSIKWLAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFF
SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRN
IDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQ
TVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS
TMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGG
RNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAG
MPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGM
ATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPP
AGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPT
RIIFYRDGVPEGQLPQILHYELLAIRDACIKLERDYQPGITYIVVQKRHHTRLFCADKNE
RIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQIL
TYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQAL
AKAVQVHQDTLRTMYFA
NT seq 2574 nt   +upstreamnt  +downstreamnt
atggaagcgggaccctcgggagcagctgcaggtgcctacctgcctcccctgcagcaggtg
ttccaggcccctcgccggcctggcatcggcactgtgggcaaaccgatcaagcttctggcc
aattactttgaggtggacattcctaagattgacgtctaccattacgaggtggacatcaag
ccggataagtgtcctcgcagagtcaaccgggaggtggtggagtacatggtccagcatttc
aaaccgcagatctttggggatcgcaagcctgtgtacgatggaaagaagaacatttacaca
gttacagcactgcctattggcaatgagagggttgactttgaggtgaccatccctggggaa
gggaaggatagaatttttaaggtctccatcaagtggctagccatcgtgagctggcgcatg
ctgcatgaagccttggtcagtggccagatccctgtgcccttggagtccgtgcaagccctg
gatgtggccatgaggcatctggcatctatgaggtacacccctgtgggccgctccttcttc
tcaccgcctgagggctactaccacccgctggggggtgggcgcgaggtctggttcggcttt
caccagtctgtgcgccctgccatgtggaagatgatgctcaacattgatgtctcagccact
gccttctacaaagcacagccagtgattgagttcatgtgtgaggtcctggacatcaggaac
atagatgaacagcccaagcccctcacggattcccagcgcgttcggtttaccaaggagata
aagggcctgaaggtggaagtgacccactgtggacagatgaagaggaaataccgcgtgtgt
aatgttacccgtcgccctgctagccatcagacgtttcccttgcagctggagagcggacag
accgtggagtgcaccgtggcacaatatttcaagcagaaatacaaccttcagctcaagtat
cctcacctgccctgcctgcaagttgggcaagagcagaagcatacctatttgcccctcgag
gtctgtaacattgtggctgggcagcggtgcattaagaagctgactgacaaccagacttca
accatgataaaggctacagctaggtcggccccagacagacaggaggagatcagtcgcctg
atgaagaacgccagctacaacttggatccctacatccaggaatttggaatcaaagtgaag
gatgacatgacggaggtgacggggcgagtgctgccggcgcccatcttgcagtacggcggc
cggaaccgggccattgctacacccaaccaaggtgtctgggacatgcgtgggaaacagttc
tacaatgggattgagatcaaagtctgggccatcgcctgcttcgcaccccaaaaacaatgt
cgagaagaggtgctcaagaacttcacggaccagcttcggaagatctccaaggatgcaggg
atgcccatccagggtcagccatgtttctgcaaatacgcacagggggcggacagcgtggag
cccatgttccggcatctcaagaatacctactcaggactgcagctcattattgtcatcctg
cccgggaagacgccggtgtatgctgaagtgaagcgtgttggagatacgctcttgggaatg
gcgacacagtgtgtgcaggtgaagaatgtggtcaagacctcacctcagactctgtccaac
ctctgcctcaagatcaatgtcaaactcggtggcatcaacaacatccttgtcccacaccag
cgctctgctgttttccaacagccagtgatttttctgggagcagacgttacacaccccccg
gctggggacgggaagaaaccatctatcacagcagtggtaggcagtatggatgcacacccc
agccgatactgtgccactgtgcgtgtacagcgtccacggcaggagatcattgaggacttg
tcctatatggtgcgggagctgctcatccagttctacaagtccacccgattcaagcccacc
cgaatcatcttctaccgagatggggtccctgaaggccagctgcctcagatccttcactat
gagctgcttgccattcgagatgcctgcatcaaactggaaagagactaccagcctgggatc
acgtacatcgtggtacagaagcgacatcacacccgcctcttttgtgctgacaagaatgag
cggattgggaagagtggtaacatcccagctgggaccactgtggacaccaacatcactcac
ccgtttgagtttgacttctacctgtgcagccatgcaggcatccagggcaccagccgacca
tcccattattatgtcctttgggatgacaaccgtttcacagcagatgagctccagatcttg
acataccagctgtgccacacttatgtacgatgcacacgttctgtctctatcccagcacct
gcctactatgcccgcctggtggctttccgggcccgataccacctggtggacaaggagcat
gacagtggagaggggagccacatatctgggcagagcaatgggcgagacccccaggccctg
gccaaagccgtgcaggttcaccaggatactctacgcaccatgtacttcgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (11)   
   RefSeq(nuc) (7)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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