KEGG   Rattus norvegicus (rat): 313663
Entry
313663            CDS       T01003                                 
Symbol
Crocc
Name
(RefSeq) rootletin
  KO
K16469  rootletin
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    313663 (Crocc)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   313663 (Crocc)
SSDB
Motif
Pfam: Rootletin
Other DBs
NCBI-GeneID: 313663
NCBI-ProteinID: NP_001402864
RGD: 1305364
Ensembl: ENSRNOG00000008334
Position
5:complement(158603979..158646728)
AA seq 2010 aa
MSLGLAESLQAQLALEIVIQTLESCVLEPDQEKSLSVQNPAQDFQGASLPVCVREIITSN
LSQPETPAPLQVPEMASLLSLQEENQLLQQELSRVEDLLAQSRAERDELAIKYNAINERL
EQAVRLETGELEAQEPRGLVRQSVELRRQLQEEQASYRRKLQAYQEGQQRQAQLVQRLQA
KILQYKKQCSEMEKQLLERSTELEQQRLRDTEHSQDLDRALLRLEEEQQRSASLAQVNDM
LREQLDQANLANQTLSEDICKVTSDWTRSCKELEQREATWRREEESFNAYFSSEHSRLLL
LWRQVMGLRRMASEVKMGTERDLLQLGGELVRTSRAVQEVGLGLSASLQRAESRAEAALE
KQKLLQAQLEEQLRAKLLREKDLAQLQVQSDLDKADLSARVTELALSVEHLQNQNTEKDQ
VNRTLSDKLEALESLRLQEQTTLDTEDGEGLQQTLRDLAQAALSDTESGVQLSNSERTAD
TSDGSFRGLFGQRTPTPPRHSSPGRGRSPRRGLSPACSDSSTLTLIHSALHKRQLQVQDM
RGRYEASQDLLGSVRKQLSDSEGERRGLEEQLQRLRDQTATSVQAQEDAQREAQRLRSAN
EILSREKGNLSHSLQVAQQQAEDLRQELEKLQAAQEELRRQHTQLEDQQEDTVQEGARAR
RELERSHRQLEQLEVKRSGLTKELVEVREALSCAVLQRDVLQTEKAEVAEALTKAEAGRA
QLELSVTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKAALLGRQQQAEH
ATSLAVEKQERLEQLRLEQEVERQGLEGSLCVAEQAREALGQQILVLRSERSHLQEQVAQ
LSRQLNGRDQELDQALRESQRQVEALERAAREKEAMAKERAGLAVQLAAAEREGRTLSEE
TIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTAT
EEKAALDKELMTQKLVQAERETQASLREQRAAHEEDLQRLQREKEAAWRELQAERAQLQG
QLQQEREELLARMEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKL
MGTRHSLAAISLEMERQKRDAQSRQEQDRNTVNALTSELRDLRAQLEEATAAHAQQVKEL
QEQTGNLGRQREACMREAEELRTQLRLLEDTRDGLRRELLEAQRKVRDSQDSSEAHRQEA
SELRRSLSEGTKEREALRRSNEELRTAVKKAESERISLKLANEDKEQKLALLEEARMSVA
KEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQSRLALGERTEK
ESRREVLGLRQKVLKGESSLEALKQELQGSQRKLQEQEAEFRARERGLLGSLEEARGAEK
KLLDSARSLELRLEGVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGLRS
ALRRGLGLGRVSSSPAREAPAGGSGDGLSSPSPLEYSPRSQPPSPGPVASPAPPDLDPEA
VRDALRDFLQELRSAQRERDELRVQTSTLSQQLAEMEAERDHAASRAKQLQKAVAESEEA
WRSADRRLSGAQAELALQEESVRRSRRECRATLDQMAVLERSLQATESELRASQEKVNKM
KATEVKLESDKRRLKEVLDASESRSIKLELQRRALEGELQRSRLGLGDREAHAQALQDRV
DSLQRQVADSEVKAGTLQLTVERLSGALAKVEESEGTLRSKVQSLTDALAQSSASLTSSQ
DKNLYLQKALSTCEHDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELANLELQRG
DAEGQLQQLQQVLRQRQEGEAVALRSVQKLQEERRLLQERLGSLQRALAQLEAEKRELER
SALQLDKDRVALRKTLDKVEREKLRSHEDTLRLNAERGRLDRTLTGAELDLAEAQQQIQH
LEAQVVEVLERNHSPVQVEADEQHLELQQEVERLRSAQVRTERTLEARERAHRQRVSGLE
EQVSTLKAQLHQERHRSSASMSPPSGTPEK
NT seq 6033 nt   +upstreamnt  +downstreamnt
atgagcctggggctggcagaatccctgcaggcccagctggcactggagattgtgatccag
acactggagagttgtgtcctggaaccagaccaagagaagagcctgagtgtacagaaccca
gcccaggatttccagggagccagcctacctgtctgtgttagggagatcatcaccagcaac
ctctcccagcctgagaccccagccccactccaggtcccagagatggcctcactgctgtcc
ctgcaggaggaaaaccagctgctgcagcaggagctgtcccgggtggaggacctgctggcc
cagagccgtgcagagcgtgatgaacttgccatcaagtacaatgccatcaatgagaggctg
gagcaggctgtgcggctggagactggggagctggaggcacaggagccccggggtctggtg
cggcagagcgtggagctgaggaggcagctgcaggaggagcaggcctcctaccggcgcaag
ctacaggcctaccaggagggccagcagcggcaggcccagctagtgcagcggctgcaggcc
aagatcctgcagtacaagaagcagtgctcagagatggagaagcagctgctggaaaggtcc
accgagctggagcagcagcgactgagggacacagagcacagccaggacctggacagagct
cttctgcgcctagaggaagagcagcagagaagtgccagcttggcccaggtgaacgacatg
ctgagagagcagctagaccaggcaaacctggccaaccagactctgagcgaggacatttgc
aaggtgaccagtgactggacccgaagctgtaaggagctggaacagagggaggcaacatgg
aggcgtgaggaggagtccttcaacgcctacttcagcagcgagcacagccgcctgctgctc
ctctggaggcaggtcatggggctccgaaggatggccagcgaggtgaagatgggcaccgag
agggacctactacagctaggaggagaactagtccggacatcccgggctgtccaggaggtg
ggcctaggactgagtgccagcctgcagcgggctgagagcagggctgaggcggctctggag
aagcaaaagctgctgcaggcccaactggaggagcagctacgggccaagctgctccgggag
aaggacctggcccagcttcaggtgcagagtgacctggacaaggctgatctcagtgccaga
gtgacagagctggccttgtctgtggaacaccttcagaaccagaacacagagaaggaccag
gtcaacaggaccctctctgacaagttggaggccctggagtctctgcggctccaggagcag
acaaccctggacactgaggatggagaggggctgcagcagaccttgagagacctggcacag
gctgccctctctgatactgagagtggtgtccagctcagcaactcagagcgcactgcggat
acctcagacggcagcttccgcggcctctttggccagcggactccaactccaccgcggcac
tcctccccgggtcgaggtcgttctccacgccgaggtctgtccccagcctgctctgactcc
tccacactcacgctgatccactctgccctgcacaagcgccagctacaggtccaggacatg
cgtgggcgctatgaagccagccaagatctgttgggttccgtgcgcaagcaacttagtgac
agtgagggtgagcggcgtggcctggaggagcagctacagcgcctccgggaccagacagca
acctcagtccaggcccaagaggatgcgcagcgtgaggcccagcgcctacgcagtgccaac
gagatcctgagcagggagaagggcaacctgagccacagcctgcaggtggcccagcagcaa
gctgaggatctgcgccaggagctggaaaagctgcaggccgcccaggaggagctgaggcgg
cagcacacccagctggaggaccagcaggaggacacggtgcaggagggcgcccgggcccgc
cgcgagctagagcgcagccatcggcagctggagcagctggaagtgaagcgctcggggctg
accaaggagctggtggaggtgcgggaggcactgagctgcgctgtactgcagagggatgtg
ctgcagacagagaaggcagaggtggctgaggcgctgaccaaggctgaggcaggccgtgcg
cagctggagctctctgtgaccaagctgagggcagaggaggcttccctgcgagattccttg
tccaagatgagtgccctcaacgagagtctcgcccaggacaagctggaattaaaccgcctc
atcgcccagctagaggaagaaaaggcggcgctcctgggccgccagcagcaggcggagcac
gccacttcgctggctgtggagaagcaggaacggttggagcagctgagactggagcaggag
gtggagaggcagggcctggagggctccctgtgtgtggctgagcaggcccgggaggcgctg
gggcagcagatccttgtattgcgcagcgaacgcagccatctgcaggagcaggtggcccag
ctctcccggcagctgaatggacgggaccaggagttggatcaggccctgcgggagtcccag
cggcaggtggaggccctggagcgcgctgcccgggagaaggaggcgatggccaaggaacgg
gctggcctggctgtgcagctggcagcagccgagcgtgagggccggaccctgtcagaggag
accattcgcctgcgcttggagaaggaggccctggagagcagcctgtttgacgtgcagagg
cagctggctcagctcgaggcccgccgggagcagctagaagcggacagtcaagccctgctg
ctggccaaggaaactctgactggggagctggcaggcctgcggcagcaggtaacagccact
gaagagaaagcggccttggacaaggagctgatgacccagaagctagtgcaagcagagcgg
gagactcaggcctctctgcgggaacagcgggcagcccatgaggaggatctgcagagactc
cagcgggagaaggaggctgcatggcgggagcttcaggcagagcgggcccagctgcagggc
cagttacagcaggagcgagaggagctgctggcccggatggaggctgagaaggaggagctg
agtgaggagatcgccgcgctgcagcaggagcgggacgagggcctgctcctggcggagagt
gagaagcagcaggccttgtccttgaaggagtctgagaagacggcactgtcagagaagttg
atgggaacccggcacagtctggctgccatctctctggagatggaacggcagaagcgagat
gcccagagccggcaggaacaggaccggaacacagtgaacgccctaacatctgaacttcga
gacctccgggctcagctggaagaagccacagcagcccatgcacagcaggtgaaagaactc
caggagcagacggggaacctgggtcggcagcgggaggcctgcatgagggaggcagaagag
ctgaggactcagctgcgcttgttggaggatacccgtgatgggctgcggcgggagctgctg
gaggctcagcgcaaggtccgggacagccaggacagctccgaggcccatcgccaggaggct
agtgagctgcggcgcagtctgagtgagggcaccaaggagcgtgaggccctgcggcgttcc
aacgaggagctgaggaccgctgtgaagaaggcagagagcgagcggatcagcctgaagctt
gccaatgaggacaaggagcagaagctggccctcctggaagaggctcgaatgtctgtcgcc
aaggaggctggagagcttcgggcctcactgcaggaagtggagcgatcccggctggaggct
cgacgtgagctgcaggagcttaggcgacagatgaagactctggacagtgacaatggccga
ctgggccgtgagctggcagacctgcagagccgcttggccctgggcgagcggacagagaag
gagagccggcgagaggtcctgggcctgcggcagaaggtgctgaaaggcgagagcagcctg
gaggccttgaagcaggagctccagggttcccagaggaagctgcaggagcaagaggctgag
ttccgtgcacgcgaacgaggcctgttgggctccctggaggaggcgcgtggtgccgagaag
aagcttctggactctgctcgcagcctggagctaagactggagggtgtgcgggcagagacc
tcagagctggggctgcggctgagtgcagctgagggccgggcccagggcctggaggtcgag
cttgcccgcgtggaggcgcagcgccgggtagccgaggcccagctgggtggcctgcgctcc
gccctgcgccggggcctgggcctgggccgagtgtccagctccccggctcgagaggcccct
gcaggaggaagtggggacggactcagcagccccagtcctttggaatatagccctcggtcc
cagcccccgtctccagggcctgttgcctccccggcacctccagacttggacccagaagct
gtgcgtgacgccctccgagattttctgcaagagctgcggagtgcccagcgggagcgggat
gaacttagagtccagactagcaccctgagtcaacagctggctgagatggaggccgagaga
gaccatgcagcctcaagggccaagcagctgcagaaggcagtagctgagagcgaggaagcc
tggcgcagtgcagacaggcggctgagcggggcccaggccgagctggcactgcaggaagag
agtgtgcgacgtagcaggcgggagtgcagggccacgctggaccagatggcagtgctggag
aggagcctgcaggccaccgagagcgagctccgggccagccaggagaaggtcaacaagatg
aaggccactgaggtgaagctggagagcgacaagcggcgactgaaggaggtgctggatgcg
tctgagagccgctccatcaaactggagctgcagcggcgcgctctcgagggcgagctgcag
cgcagccgcctaggcctgggggaccgtgaggcccacgctcaggccctccaggatcgggtg
gactccctgcagagacaggtggcagacagtgaggtgaaggcagggaccttacagctaaca
gtggagcggctcagtggggcactggccaaggtggaggagagcgaggggaccctgcggagc
aaggtgcagagcctgacagatgccctggcccagagcagtgccagtctcaccagcagtcag
gacaagaatctgtacctacagaaggccttgagtacctgcgaacatgaccgccaagtgctg
caggaacggctggacgctgccagacaggcactgtctgaagctcgaaggcaaagcagctcc
ctgggtgagcaggtgcagactctgcggggtgagctggccaacctggagctgcagcggggc
gatgctgaaggccagctgcagcagctgcagcaggtgctgcggcagcggcaggaaggggag
gccgtggctttgcgctccgtccagaagctacaggaggagcggcgcctgttgcaggagcgc
ctgggcagtctgcagcgagccctggcccagctggaagctgagaaacgtgagctggagcgg
tcggcactgcagctggacaaggaccgtgtggcactcaggaagacactggacaaggtggag
cgggagaagcttcgaagccacgaggacacactgcgcttgaatgcagagaggggccgcctg
gaccgcacactcacaggagctgagctggacctggctgaagcccaacagcagatccaacat
ttagaggcacaggtggtggaagtcctggagcggaaccacagtcctgtccaggtggaggca
gatgagcagcacctggagctgcaacaggaggttgagcgcctgcgcagtgcccaggtacgg
acagagcgcacactggaggcacgggagcgggcccaccgccagcgcgtgtcggggctggag
gagcaggtatccacactgaaggcacagctgcatcaggagcgtcaccggagctcagcatcc
atgtccccaccctctggcaccccagagaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (12)   
   UniProt (1)   
   RefSeq(pep) (11)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system