KEGG   Rattus norvegicus (rat): 313678
Entry
313678            CDS       T01003                                 
Symbol
Prdm2
Name
(RefSeq) PR domain zinc finger protein 2
  KO
K11432  [histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:2.1.1.355]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00310  Lysine degradation
rno01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    313678 (Prdm2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    313678 (Prdm2)
   03036 Chromosome and associated proteins [BR:rno03036]
    313678 (Prdm2)
Enzymes [BR:rno01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.355  [histone H3]-lysine9 N-trimethyltransferase
     313678 (Prdm2)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    313678 (Prdm2)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     313678 (Prdm2)
SSDB
Motif
Pfam: PRDM2_PR zf-C2H2 zf-C2H2_4 zf-C2H2_6 SET zf-H2C2_2 zf-C2HE zf-C2H2_jaz zf-C2H2_11 zf-MYST PyrI_C
Other DBs
NCBI-GeneID: 313678
NCBI-ProteinID: NP_001071116
RGD: 1594531
Ensembl: ENSRNOG00000033522
UniProt: Q63755
Position
5:complement(160704396..160815184)
AA seq 1706 aa
MHQNTESVAATETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVG
DKKKRSQVRNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINRA
IYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRRGKKKSHENKNK
GIRTHPTQLKASELDSTFANMRGSAEGPKEEDERPLASAPEQPAPLPEVGNQDAVPQVAI
PLPACEPQPEVDGKQEVTDCEVNDVEEEELEEEEELEEEEEEELGEDGVEEADMPNESSA
KEPEIRCEEKPEDLLEEPQSMSNEAREDSPDVTPPPHTPRAREEANGDVLETFMFPCQHC
ERKFATKQGLERHMHIHISTINHAFKCKYCGKRFGTQINRRRHERRHETGLKRRPSMTLQ
SSEDPDDGKGENVTSKDESSPPQLGQDCLILNSEKTSQEVLNSSFVEENGEVKELHPCKY
CKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLLEEPQPPAEQAPPSQNVYVPSTEPEE
EGETDDVYIMDISSNISENLNYYIDGKIQTNSSTSNCDVIEMESNSAHLYGIDCLLTPVT
VEITQNIKSTQVSVTDDLLKDSPSSTNCESKKRRTASPPVLPKIKTETESDSTAPSCSLS
LPLSISTAEVVSFHKEKGVYLSSKLKQLLQTQDKLTLPAGFSAAEIPKLGPVCASAPASM
LPVTSSRFKRRTSSPPSSPQHSPALRDFGKPNDGKAAWTDTVLTSKKPKLESRSDSPAWS
LSGRDERETGSPPCFDEYKISKEWAASSTFSSVCNQQPLDLSSGVKQKSEGTGKTPVPWE
SVLDLSVHKKPCDSEGKEFKENHLAQPAAKKKKPTTCMLQKVLLNEYNGVSLPTETTPEV
TRSPSPCKSPDTQPDPELGPDSSCSVPTAESPPEVVGPSSPPLQTASLSSGQLPPLLTPT
EPSSPPPCPPVLTVATPPPPLLPTVPLSHPSSDASPQQCPSPFSNTTAQSPLPILSPTVS
PSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSFPSSSCSSTSPSPPPLSAVSSVVSSGDN
LEASLPAVTFKQEESESEGLKPKEEAPPAGGQSVVQETFSKNFICNVCESPFLSIKDLTK
HLSVHAEEWPFKCEFCVQLFKVKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQR
DLHPDEVCTHHEFESGTLRPQNFTDPSKANVEHMPSLPEEPLETSREEELNDSSEELYTT
IKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTA
IRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGVVVLDNSGKN
AFRRMGQPKRLSFNVELGKMSPNKLKLSALKKKNQLVQKAILQKNRAAKQKADLRDTSEA
SSHICPYCDREFTYIGSLNKHAAFSCPKKPLSPSKRKVSHSSKKGGHASSSSSDRNSSSH
PRRRTADTEIKMQSTQAPLGKTRARSTGPAQASLPSSSFRSRQNVKFAASVKSKKASSSS
LRNSSPIRMAKITHVEGKKPKAVAKSHSAQLSSKSSRGLHVRVQKSKAVIQSKTALASKR
RTDRFIVKSRERSGGPITRSLQLAAAADLSESRREDSSARHELKDFSYSLRLASRCGSST
ASYITRQCRKVKAAAATPFQGPFLKE
NT seq 5121 nt   +upstreamnt  +downstreamnt
atgcatcagaacactgagtctgtggcagccactgagactctggctgaggtacctgaacat
gtgcttcgaggacttccagaggaagtaagacttttcccatctgcagtcgacaagactcgg
attggtgtctgggctactaaaccaattttaaaagggaaaaagtttgggccatttgttggt
gataagaagaagagatcccaggttaggaataatgtgtacatgtgggaggtctactaccca
aatttggggtggatgtgcattgatgccaccgatccggagaagggcaactggctacgctat
gtgaactgggcttgctcaggagaagagcagaatttatttccactggaaatcaacagagcc
atttactataaaaccttaaagccaatcgcgcctggcgaggagctcctggtctggtacaat
ggggaagacaaccctgagatagcagctgcgattgaggaagagcgagccagcgcccggagc
aagcggagctccccgaagagccgcagagggaagaagaaatcacacgagaacaaaaacaaa
ggcatcagaacccaccccacacagctgaaggcaagtgagctggactctacctttgcaaac
atgaggggctctgcagaaggtccaaaagaagaggatgagaggcctttggcttcggcacct
gagcagccagcccctctgccggaggtggggaaccaagatgcagttccacaggtggccatc
cctctccctgcctgcgagccacagccagaggtagatgggaaacaagaagtcacagactgt
gaggtcaatgatgtggaggaagaggagctggaagaggaagaggagctggaagaggaggag
gaggaggagttgggagaagatggggtagaagaagcagacatgccgaatgaaagctctgcg
aaagagccggagatccggtgtgaagaaaagccagaagacttattagaagagccacagagc
atgtcgaatgaagctcgtgaagactctccagacgtgacccctcctccccacactcccaga
gctagagaggaggccaacggtgatgtacttgagacatttatgtttccgtgtcagcactgt
gaaagaaaatttgcaacgaagcaggggctagagcgtcacatgcacatccacatttctacc
atcaatcatgctttcaagtgcaagtactgtgggaaacggtttggcacacagattaacagg
aggcggcatgaacggcgccacgaaacggggttgaagagaagacccagcatgactttacag
tcctcagaggatccagatgatggcaagggggaaaatgttacttctaaagatgagtcaagt
ccacctcaactcgggcaagactgtttgatattgaactcagagaaaacctcacaggaagta
ctgaattcatcttttgtggaagaaaatggtgaagttaaagaacttcatccgtgcaaatac
tgcaaaaaggtatttggaactcacaccaatatgagacgacatcagcgtagagttcatgag
cgccacctgattcccaaaggtgtcaggcgaaaaggaggacttctggaagagccacagcca
ccagcagagcaggctccaccctcccagaatgtctatgtcccaagcacagagccagaggag
gaaggggaaacagatgacgtgtacatcatggacatttctagcaacatctctgaaaaccta
aattactatattgacggtaagattcagaccaacagcagcactagtaactgtgatgtgatt
gagatggagtctaattctgcacacttgtatggcatagactgtctgctcactccagtgacc
gtggagattactcagaacataaagagcactcaggtctctgtgacagatgatcttctcaaa
gactctcccagcagcacaaattgtgagtctaagaaacggaggactgccagtccacctgtg
ctccccaaaattaaaacggagacggagtctgattccacagcaccctcgtgttccttaagt
ctgcccctgagcatatccacagccgaggtggtgtccttccataaagagaagggcgtctat
ttgtcgtccaagctcaagcagcttcttcagacccaggacaagctgacccttcctgcaggg
ttttcagcagctgagattcctaagttaggtcccgtgtgtgcgtctgctcctgcatccatg
ttgcccgtgacctctagtaggtttaagagacgcaccagctctccaccgagctctccacag
cacagccctgcccttcgagacttcgggaaaccaaatgatgggaaagcagcatggacagac
acagtcctgacttccaagaaacccaagttagaaagtcgtagtgactcaccagcatggagt
ttgtctgggagagatgaaagagaaaccggaagccctccttgctttgatgaatacaaaata
tcaaaggaatgggcagccagttctactttcagcagtgtgtgcaaccaacagccattggat
ttatccagcggggtcaaacagaagtcagagggcacaggcaagactccagtcccatgggaa
tctgtattggatctcagtgtgcataaaaagccttgcgattctgaaggcaaggaattcaaa
gagaaccatttggcacagccagctgcaaagaagaaaaaaccaaccacctgtatgcttcaa
aaggttcttctcaatgagtataatggtgttagcttacctacagaaaccacaccagaggtg
accaggagcccaagtccttgtaaatccccagatacacagccagatcctgaacttggtcct
gactcaagttgctcagtccccactgctgagtctccacctgaagttgttggcccttcctca
ccccctctccagacagcctccttatcctccggtcagctgcctcctctcttaacccccaca
gagccttcttcccctcccccctgccctcctgtgttaactgttgccactccaccacctccc
ctccttccaaccgtccctctctcccacccctcttctgatgcctcccctcagcagtgtccc
tctccgttctcaaacaccactgctcagtctcctcttcccattctctccccaacagtgtct
ccctctccctctcccattcctcctgtagagccacttatgtctgctgcttcccctggtccc
ccaacactttcttcctcctcctcttcttcctcttccttcccttcctcttcctgctcctcc
acctccccctccccaccccctctttcagcagtgtcatctgtggtttcctctggggacaac
ctggaggcatctctgcctgcagtaactttcaaacaggaggagtcagagagtgaaggtctg
aaacccaaggaagaggccccacctgcagggggacagagtgtggtccaagaaacattcagc
aaaaacttcatttgcaatgtctgtgaatcgccttttctttccattaaagacctaaccaaa
catttatccgtccatgctgaagagtggcccttcaaatgtgagttttgtgtgcagctgttt
aaggttaagactgatctatcagagcatcgatttctgcttcatggggttggaaatatcttt
gtgtgttctgtatgtaagaaagaatttgccttcttatgcaatctgcagcagcaccagcgt
gatctccacccagatgaggtatgcacacaccacgagtttgaaagtgggaccctgaggccc
cagaacttcacagaccccagcaaggccaatgtggagcatatgccaagtttgccagaagag
cctttagaaacttctagagaggaggagttaaatgattcctctgaagagctttacacgacc
atcaaaataatggcttctggaataaagacgaaggatccagatgttcgacttggtctcaac
cagcactacccgagctttaaacctcctccatttcagtaccaccatcgaaaccctatgggg
ataggggtgacagccaccaacttcaccacccacaatattccacagactttcactactgcc
atccgctgcacaaagtgtgggaagggcgtcgacaatatgcctgagctgcataagcatatc
ttggcgtgtgcgtctgcaagtgacaagaagaggtacacccctaagaaaaacccagtgccc
ctgaaacaaactgtgcagcccaaaaatggagtggtggttctagacaactctgggaaaaat
gccttcagacggatggggcagcccaagagactgagcttcaatgttgaactgggtaaaatg
tctccaaacaagctcaagctgagtgcgctgaagaagaaaaaccagctggtgcagaaggcc
atccttcagaagaacagagccgcgaagcagaaggcggacctgagggacacttccgaggcg
tcctcacacatctgcccgtactgtgacagggagttcacatacattggcagcctgaataag
catgccgccttcagctgtcctaaaaaacctctttctccttccaaaagaaaagtttcccat
tcgtctaagaaaggtggccatgcatcatcttctagcagtgacagaaacagcagcagccac
ccccggaggcggactgcagataccgagatcaagatgcagagcacgcaggcacccttgggc
aagaccagagctcggagtacaggccccgcccaggcctcactgccctcctcgtccttcaga
tccagacagaatgtcaaatttgcagcttcagtgaaatccaaaaaagcaagctcttcatcc
ttgaggaattccagtcccataagaatggccaaaattactcacgtcgagggcaaaaaaccc
aaagctgttgccaagagtcattctgctcagctctcaagcaaatcctcccgaggcctgcat
gtcagagtgcagaagagcaaagctgtcatacagagcaagactgccctggccagtaagagg
agaacagaccggttcatagtgaaatctagagagcgcagcgggggcccaatcacccgaagc
cttcagctggcagctgctgcggacctgagtgaaagcaggagagaggacagcagtgccagg
catgagctgaaggacttcagctacagtctccgcctggcatctcgatgcggctcatcaaca
gcctcttacatcaccagacaatgcagaaaggtcaaggccgccgcagcaactccgttccag
ggacccttcctcaaagagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (9)   
   RefSeq(nuc) (7)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (52)   

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