KEGG   Rattus norvegicus (rat): 313707
Entry
313707            CDS       T01003                                 
Symbol
Exosc10
Name
(RefSeq) exosome complex component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    313707 (Exosc10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    313707 (Exosc10)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     313707 (Exosc10)
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 313707
NCBI-ProteinID: NP_001386158
RGD: 1593248
Ensembl: ENSRNOG00000010719
Position
5:164278414..164302067
AA seq 885 aa
MAPPSPREHQSAPATGATKPDAEMVLPGFPDADSFVKFALGSVVAVTKASGGLPQVGDEY
DFYRSFPAFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRSKVTELEDKFDLLVDTNDVI
LERVGILLDEASGVNKHQQPVLPAGLQVPKTIVSSWNRKAGEYGKKAKAETFRLLHAKNI
LRPQLRFREKIDNSNTPFLPKIFVKPNARKPLPQALSKERRERPQDRPEDLDVPPALADF
IHQQRAQQVEQDVFAHPYQYELDHFTPPPSVLQRPQPQLYRPVEETPCHVVSSLDELVEL
NEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPA
IVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQ
LADWRIRPLPEEMLNYARDDTHYLLYIYDRMRLELWERGNDQPVQLQVVWQRSRDICLKK
FVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSETAAGVKKSGPLPSAE
RLENDLFGPHDCSHAPPDNYPVTSTDGTMPLQKQPSLFDEGKEETSVDARCLLATAVITL
FSEPSTEEAGKTPLTVAQKKAQSIMESFENPFRMFLPSLENKAHISQAAKFDPSSKIYEI
SNRWKLASQVQKEPKEAAKKKVAEQTAAREETKEESTAAVLEQPIPVRQQAALENATKKR
ERATSDLRTIEQKQEKKRLKSSKKAKDPDPPGKDFSPYDYSQSDFGAFAGDSKSKPSSQF
DPNKVAPSGKKCFGAKKFKQSVGNKSMSFPAGKSDRGFRHNWPKR
NT seq 2658 nt   +upstreamnt  +downstreamnt
atggcgcctcccagtccccgggagcatcagtccgcgccagcgaccggtgcgaccaagcct
gacgcggagatggtactgcctggcttcccggatgcagacagcttcgtaaagtttgcactt
gggtcggtagtggccgttaccaaggcatctgggggcctgccacaggtcggtgacgagtat
gacttttaccgaagttttcctgccttccaggcattttgtgagacacaaggagacaggttg
cttcagtgcatgagtcgggtgatgcagtaccatgggtgtcgcagcaacatcaaagaccga
agcaaagtcactgagttggaggacaagttcgatttactcgtcgacaccaacgacgtgata
ttggagagagtgggtatattactggatgaagcttcaggtgtcaacaagcatcagcagcct
gtcctccctgcggggctgcaggtccccaaaacgatagtgtcgagctggaaccggaaggca
ggagaatatggcaaaaaagcaaaggcggagactttccgactgctacatgcaaaaaacatc
ctccggcctcagctcaggtttcgagagaagatcgacaattccaacacgccatttctccca
aagatctttgttaaacccaatgctcggaagccactccctcaggctctctcaaaagaaagg
cgggaacgcccgcaggatcgtccagaggacctggatgtccctccagcgctggcagatttc
atccatcagcagagagcccagcaggtggagcaggatgtgtttgcacacccttatcagtat
gaactcgatcactttactccgcctccctcggtgctgcaaaggccgcagccccagttgtac
aggcctgtggaagagacaccctgccacgttgtgtcatccctagatgaacttgtggagctc
aatgaaaagctcttgggttgtcaagagtttgcagtggacttagagcaccactcatacaga
agcttcctaggactgacgtgcctgatgcagatctccacgcgcacagaagacttcattgtt
gacacccttgagcttcgaagtgacatgtacatcctcaacgagagcctcacagacccagcc
atcgttaaggtcttccatggtgccgactctgacatcgagtggctgcagaaggacttcggg
ctctatgtggtgaacatgtttgacacacaccaggcagcacggcttctcaacctggctcgc
cactcacttgaccatctgctgaggctctactgtggggtggagtcaaacaagcagtatcag
ctggcggactggaggatacgccctctgccagaggagatgctgaactatgcccgggatgac
acccattacctgctttacatctatgaccgaatgaggctggagctgtgggaaagaggcaac
gaccagcctgtccagttgcaggtggtgtggcagcggagcagggacatctgcctcaagaaa
tttgtcaagcctatctttacggatgagtcctaccttgagctatatcgaaagcaaaagaag
catctgaattcccagcagctgacagcctttcagctgctgtttgcttggcgagataagaca
gcgcgcagggaggatgagagctacggatatgttctaccaaatcacatgatgctaaagata
gctgaggaactgcctaaggagcctcaaggcatcatagcttgctgtaacccagtaccacct
cttgtccggcaacagatcaatgagatgcatctcttaatccagcaggcccgggagatgccc
ctgctcaagtctgaaactgcagctggagtgaagaagagtggacccctgcctagcgccgag
agattggagaatgatctctttggaccccatgactgctcccatgcccctccagataactac
ccggtcacctcaactgatgggaccatgccacttcagaagcagccgagcctcttcgatgag
ggcaaagaagagacgtctgtggatgccagatgcctccttgctacagctgtcatcactctg
ttcagtgaacccagcactgaggaagctggaaagactccattgacggtggcacagaaaaaa
gcccagagcataatggagtcctttgaaaacccatttaggatgttcctgccttctctggaa
aacaaggcccacatctctcaagcagcaaagtttgatccttcttcgaaaatctatgaaatc
agcaaccgttggaagctggccagccaggtccagaaagaacctaaagaagcagccaagaag
aaggtagctgagcaaacagctgcccgagaggagacaaaagaggagtccacagctgctgtg
ctcgaacagcctatccctgtgcggcagcaagccgcgctagaaaatgctactaagaagaga
gagcgagccaccagtgacctgaggaccatagagcaaaaacaggagaagaaacgactaaaa
agctccaagaaagccaaggaccctgatcccccagggaaagacttcagtccgtatgactac
agccagtcagacttcggggccttcgctggggacagtaaatccaagccttcctcccagttt
gaccccaataaggtggcaccttctggaaagaaatgttttggagccaaaaagtttaagcag
tcggtgggaaacaaaagcatgtcatttcctgctgggaagtcggacagaggcttccggcac
aactggccaaagagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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