KEGG   Rattus norvegicus (rat): 313749
Entry
313749            CDS       T01003                                 
Symbol
Nphp4
Name
(RefSeq) nephrocystin-4
  KO
K16478  nephrocystin-4
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    313749 (Nphp4)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Nephronophthisis-related proteins
   313749 (Nphp4)
SSDB
Other DBs
NCBI-GeneID: 313749
NCBI-ProteinID: NP_001032739
RGD: 1560172
Ensembl: ENSRNOG00000011967
UniProt: A6IUI8 G3V9Y6
Position
5:168270522..168356393
AA seq 1428 aa
MDDWHRAFTQNTLVPPHPQRARQFGKESTAFQCILKWLDGPLIKQGILDMLSELECHLRV
SLFDVTYKHFFGRTWKTTVKPTNQLSKQPPRILFNEPLYFHTTLSHPSIVAVIEVVAEGR
KRDGALQVLSCGFGILRIFGNKPESPTSAGQDKRLRLYHGTPRALLHPLLQDPIEQNRYM
TMMENCSLQYTLKPHPPLEPAFHLLPENFLISGLQQIPGLLPPHGDTGDALRKPRFQKPT
TLHLDDLFFTLYPSLEKFEEELVQLLISDHFREGVGLLDSGTLEVLERRLHVCVHNGLGF
VHRPQVVVLVPEMDMTLTRSASFSRRITASSKSSSGNQALVLRSHLRLPEMVNHPSFAIV
FQLEYVFNSPSGADGSASSSTSLSSLACMHMVRWAVWNPDLEAGPGKVTLPLQGGVQHNP
SRCLVYKVPSASMSSEEVKQVESGTIQFHFSLSSDALTEHANGPRAGRRSTRKALTSPSG
TPALAARDLAAIQDSPVGPGLSLSQLAASPQSLASQRSFKPPPQPLDGSQSPEGPQLQAG
SVLESRISHLEADLSQPPFSVQGTPTVEHLQELPFTPLHAPIVVGAQTRSSRSQLSRAAM
VLLQSSGFPEILDARQQPVEAVNPMDPVRFNPQKEESDCLLGNEIVLQFLAFSRAAQDCP
GAPWPQTVYFTFQFYRFPPETTPRLQLVKLDRTGKNGSASLSHILVHINKDGSFDAGSPG
FQLRYMVDPGFLKPGEQRWFAQYLAAQTLQVDVWDGDSLLLIGSAGIQMKHLLRQGRPAV
QVSHELEVVATEYEQEMMVVSGDVAGFGSVKPIGVHTVVKGRLHLTLANVGHECEPRARG
SNALPPSRSRVISNNGASFFSGGSLLIPGGPKRKRVVQAQKLADVDSELAAMLLTHTRAG
QGPQAVGQEADAVHRRKLERMRLVRLQEAGGDSDSRRISVLARHSVRAQHSRDLQVIDAY
RERTKAENIASVLSQAITTHHTLYATLGTAEFFEFALKNPHNTQHTVAIEIDSPELSIIL
DSQEWRYFKEATGLLTPLEEDMFHLRGSLAPQLYLRPRETAHIPFKFQNFSVGPPAPTQA
PAEVISEKDAESGPHWKCSAMPTKHAKVLFRVETGQLIAVLCLTVEPQPHVVDQVFRFYH
PELTFLKKAIRLPPWHTLPGAPVGMPGEDPPVHVRCSDPNVICEAQNVGLGEPRDVFLKV
ASGPSPEIKDFFVVIYADRWLAVPVQTWQVCLHSLQRVDVSCVAGQMTRLSLVLRGTQTV
RKVRAFTSHPQELKTDPAGVFVLPPHGVQDLHVGVRPRRAGSRFIHLNLVDVDYHQLVAS
WLVCLSCRQPLISKAFEITMAAGEGKGANKRITYTNPYPSRRTYRLHSDRPDLLHFKEDS
FQVAGGETYTIGLRFLPSGSAGQEEILIYINDQDDKNEETFCVKVLYQ
NT seq 4287 nt   +upstreamnt  +downstreamnt
atggatgactggcacagagccttcacccagaacacactggtccctccccacccgcagaga
gcgcggcagtttgggaaggagtccacggcgttccagtgcatcctgaagtggcttgatggg
ccactcattaagcagggaatcctagacatgctgtctgagcttgaatgccacctgcgagtg
tctctcttcgacgtcacctacaaacatttcttcgggaggacgtggaaaaccacagtgaag
cccaccaatcagctctctaagcagccacccaggatcctcttcaatgagcccttgtacttc
cacacaaccttgagccaccccagcatcgtggctgtaatagaagtggtcgctgaaggcagg
aagagggacggtgccctgcaggtgctgtcctgtgggtttggaattcttcgaatttttggc
aataagccggaatctcccacctctgcaggccaggacaaacggttgaggctgtatcatggt
acccccagagcccttctgcacccacttctccaggatcccatagaacagaacaggtacatg
acaatgatggaaaactgtagcctgcagtataccctgaagccacacccgcccctggagccc
gccttccacctgctccccgagaacttcctgatctccggtctccagcagatccctggcctc
ctcccacctcatggagacacgggtgatgccctgaggaagcctcgcttccagaagcccacc
acattgcacctagatgacctcttcttcaccctgtacccctccctggagaagtttgaggag
gaacttgtgcagctgctcatcagcgaccacttccgggagggggttggcctgctagatagc
ggcaccctagaggtcttggagcggcgcctgcatgtctgtgtccacaacggtctgggcttc
gtgcacaggccacaggtggttgtgcttgtacctgagatggacatgaccttgacgcgctcg
gccagcttcagcaggagaatcactgcctcttctaagagcagctctggaaatcaggctctg
gttttgagaagccacctgagactcccggagatggtcaatcacccatcgtttgccatcgtc
ttccagctggagtacgtgttcaacagcccctcaggagcggacggcagtgccagctcatcc
acctctctgtccagcttggcgtgcatgcacatggttcgatgggctgtttggaaccccgat
ctggaagcaggcccgggaaaggtgacgctgcctcttcagggtggggtacagcacaacccc
tcacgatgtctggtctataaggtgccttcggctagcatgagctctgaggaggtgaagcag
gtggaatccggaaccatccagttccacttctcactgagctcagatgcccttacagagcat
gccaacggccccagggcagggcggcgctccaccagaaaggcactaacgtccccttcaggc
acaccagcactggcagcccgggatcttgctgcgatacaggactctcctgtgggcccaggg
ctctcgctctcccagctggcggcctccccacagtctctggcctcacaaagatctttcaag
cctcctcctcagcccctggatggctctcagtccccagagggtccccagctccaagcagga
tctgtattagagagcaggatctctcatctggaagctgacctgagccagccgcccttctcg
gtgcaggggacgcccactgtagaacacctacaggaacttcccttcactcctttgcatgcc
cccattgtggtgggagcccagaccaggagctccagaagccagctctccagagctgccatg
gtcctcctgcagtcttccggcttccctgagatccttgatgccaggcagcagccggtggag
gccgtcaatcccatggatcctgtgaggttcaaccctcagaaggaggagtcagactgcctt
ctagggaatgagatcgtgctgcagtttcttgccttcagcagagcggcccaggactgcccg
ggagcgccgtggccacagactgtgtatttcaccttccagttctaccgtttcccacccgag
accacgccacgcctgcagctggtcaaactggacaggacaggcaagaacggctctgcctcc
ctgtctcacatcctggtccacatcaataaagacggctcctttgacgctggctcccctggc
ttccagctgaggtacatggtggatcccgggttcctgaagccaggagagcagcgctggttc
gcccagtacctggccgctcagacgctgcaagtcgacgtctgggatggagactccttgctc
ctcattgggtctgccggcatccagatgaagcacctcctccgccaagggcggccagctgtt
caggtctcacatgaactggaggtcgtggccactgagtacgaacaggaaatgatggtggtg
agcggcgacgtggcgggcttcggcagcgtcaagcccatcggagtccacacggtcgtgaag
ggccggctgcacctgaccttggccaacgtgggtcacgagtgtgaaccgagagcaagaggt
tccaacgcgctgccaccatccaggtcccgggtcatctcaaataatggagccagcttcttc
tctgggggaagcctcctcataccaggaggccccaagcgaaagcgtgtggttcaagcccag
aagctggctgatgtggacagtgagctggccgccatgctgctgacccacactcgagctggc
caggggccccaggctgtgggccaggaggcagacgctgtgcacaggcgcaagctggaaagg
atgcggctggtgcgcctgcaggaggccggaggggactctgacagtcgcaggatcagcgtg
ctggcccgacacagtgtccgtgcacagcactcacgggacctgcaggtcatcgacgcctac
cgggaacggaccaaggctgagaacattgccagcgtgttgagccaggccatcaccacacac
cacacactgtatgccacgctgggcacggctgagttcttcgagtttgcacttaaaaaccca
cacaacactcagcacacggtggccatcgagattgacagccctgagctcagcatcatcctg
gacagccaggagtggaggtacttcaaggaggccactggcctgctcacacccctggaggag
gacatgttccacctgcgtgggagcctggcaccccagctctacctgcggccccgggagact
gcccacatccccttcaagttccagaacttctctgtgggcccacctgctccgacacaggcc
cctgcggaggtgatctcagagaaggatgcagagtctggaccccattggaagtgcagtgcc
atgcctaccaaacacgccaaggtccttttccgggtggagaccggccagctcattgctgtg
ctctgcctgaccgtggagccccagccccacgtggtggaccaggttttccgtttctaccac
ccagaactcaccttcctgaagaaggccatccgcctgccgccctggcacacgcttccaggt
gctcccgtggggatgcctggcgaggaccccccagtccacgttcgatgcagcgacccgaat
gtcatctgcgaggcccagaacgtgggccttggtgagccgagggacgtgttccttaaggtg
gccagcggtccaagcccggagatcaaagacttctttgtcgtcatctatgcggatcgctgg
ctggcggtgcccgtgcagacatggcaggtctgcctccactccctgcagcgcgtggatgtc
tcctgtgtcgcagggcagatgacccgtctgtccctcgtcctacgggggacgcagaccgtt
aggaaagtgagagctttcacctcccaccctcaggagctgaagacagaccccgctggtgtc
tttgtgttaccacctcacggggtgcaggacctgcatgtgggcgtgaggccaaggagggcg
ggcagccgcttcatccatctcaacctggtggacgtcgactaccaccagctggtcgcgtcg
tggctcgtgtgcctgtcctgccgccagcccctcatttccaaggccttcgagatcaccatg
gcagcaggcgaagggaagggtgccaacaagcggatcacctacaccaacccctacccttct
cggaggacctaccgtctgcacagtgaccggccagacctgctgcatttcaaggaggactcc
ttccaggtggccggaggggagacctacaccatcgggctgcggttcttgccgagtggcagc
gccgggcaggaggagatcctgatctacatcaatgaccaggacgacaagaatgaagagaca
ttctgtgtgaaggtcctctaccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system