KEGG   Rattus norvegicus (rat): 313757
Entry
313757            CDS       T01003                                 
Symbol
Ski
Name
(RefSeq) ski oncogene isoform X1
  KO
K26503  Ski oncogene
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    313757 (Ski)
SSDB
Motif
Pfam: Ski_Sno c-SKI_SMAD_bind AAA_13
Other DBs
NCBI-GeneID: 313757
NCBI-ProteinID: XP_038967302
RGD: 1565591
Ensembl: ENSRNOG00000055340
Position
5:complement(170995851..171064957)
AA seq 686 aa
MEAAAAGRGGFQPHPGLQKTLEQFHLSSMSSLGGPAAFSARWAQEAYKKESAKEAGAATV
PAPVPTAAEPPPVLHLPAIQPPPPVLPGPFFMPSDRSTERCETVLEGETISCFVVGGEKR
LCLPQILNSVLRDFSLQQINSVCDELHIYCSRCTADQLEILKVMGILPFSAPSCGLITKT
DAERLCNALLYGGAYPPPCKKELAASLALGLELSERSVRVYHECFGKCKGLLVPELYSSP
SAACIQCLDCRLMYPPHKFVVHSHKALENRTCHWGFDSANWRAYILLSQDYTGKEEQARL
GRCLDDVKEKFDYANKYKRRVPRSLGCAHPRQRLSAFRPWSPAVSASEKETSPHLPALIR
DSFYSYKSFETAVAPNVALAPPTQQKVVNSPPCTTVVSRAPEPLTTCIQPRKRKLTMDAP
GAPDMLTPVAAAEEDKDSEAEVEVESREEFTSSLSSLSSPSFTSSSSAKDLSSPGMHAPP
VAAPDAAAHADAPSGLEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLTAALQ
AKRSLHQELEFLRVAKKEKLREATEAKRSLRKEIERLRAENEKKMKEANESRVRLKRELE
QARQVRVCDKGCEAGRLRAKYSAQIEDLQAKLQHAEADREQLRADLLREREAREHLEKVV
KELQEQLWPRPRPENSGGESNAELDP
NT seq 2061 nt   +upstreamnt  +downstreamnt
atggaagctgcagcggccggccggggcggcttccagccgcacccggggctgcagaagacg
ctggagcagttccacctgagctccatgagctcgctgggcggcccggccgctttctcggcg
cgctgggcgcaggaggcctacaagaaggagagcgccaaggaggcgggtgcggccacagtg
ccggcgccggtgcccactgccgcggagccgccgcccgtgctgcacctgcctgccatccag
ccgccgccgcccgtgcttcccgggcccttcttcatgccgtcggaccgctccaccgagcgc
tgtgagaccgtgctggaaggggaaaccatctcttgtttcgtggtgggaggcgagaagcgt
ctgtgcctgccgcagatcctcaactcggtgctgcgcgacttctcactgcagcagatcaac
tcggtgtgcgatgagctgcacatctactgctcgcgctgcaccgccgaccagctggagatc
ctcaaagtcatgggcatcctgcccttctccgcgccctcctgcggtctcatcaccaagacg
gacgcggagcgcctgtgcaacgcgctgctctacggcggcgcctacccgccgccttgcaag
aaggagttggcggccagcctggcgctgggcctggagctcagcgaacgcagcgtccgcgtg
taccacgagtgcttcggcaagtgcaaagggctgctggtgcccgagctgtacagcagtcct
agcgccgcctgcatccagtgcctcgactgccgcctcatgtacccgccgcacaagttcgtt
gtacactcgcacaaggccctggagaaccggacctgccactggggcttcgactcagccaac
tggcgggcctacatcctgctgagccaggactacacgggcaaggaggagcaggcccgcctt
ggccgctgcctggacgacgtgaaggagaagttcgactatgccaacaagtacaagcggagg
gtgccccggagcctcggctgtgctcaccctcgccagcgcctttctgctttccggccctgg
tcccctgcagtgtccgcaagtgagaaggagacgtccccacacctaccagccctgattcga
gacagcttctactcctacaagagctttgagacagctgtggcccccaatgtggccctagca
ccaccaacccagcaaaaggttgtgaacagtccaccatgcaccaccgtggtctcccgggca
ccagaaccccttactacgtgtatccagccacgaaagcgaaagctgaccatggacgcacca
ggagccccagacatgctcacacccgtggctgctgcagaggaggacaaggattctgaggcc
gaggttgaagttgaaagcagagaggaattcacctcctccttgtcctcgctgtcctcccca
tcctttacctcgtccagctctgccaaggatctaagctcccccggcatgcatgctccccct
gtggctgctcctgatgccgcagcccatgctgatgccccaagtgggctggaggcagagttg
gagcaccttcggcaagccctggagggtggcctggataccaaggaagccaaagaaaagttc
cttcatgaggtggtcaaaatgcgagttaagcaagaggagaagctgacagcagcccttcag
gctaagcgcagcctgcaccaggagctagaattcttgcgtgtggccaagaaggagaaactg
cgggaagccacagaggccaagcgcagtttgaggaaagagattgagcggctccgagctgaa
aatgagaagaagatgaaggaggccaacgagtcccgggtgcgcctgaagcgagaactggag
caggcgcggcaggtccgggtgtgtgacaagggctgcgaggccgggcgccttcgtgccaag
tactcagcccagattgaggacctgcaagcaaagctgcagcatgcagaggctgaccgtgag
cagcttcgagctgacctgctgcgggaacgggaggcccgtgagcacctggagaaggtggtg
aaggagcttcaggagcagctgtggcctcggccacggcctgagaattctggaggtgagagc
aacgctgagctggatccctag

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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