KEGG   Rattus norvegicus (rat): 313914
Entry
313914            CDS       T01003                                 
Symbol
Gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2
  KO
K15200  general transcription factor 3C polypeptide 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    313914 (Gtf3c2)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIC
     313914 (Gtf3c2)
SSDB
Motif
Pfam: WD40
Other DBs
NCBI-GeneID: 313914
NCBI-ProteinID: NP_001020291
RGD: 1560392
Ensembl: ENSRNOG00000056904
UniProt: Q5PQP7
Position
6:30913263..30941305
AA seq 951 aa
MDTCGVGYVALGEADPVGSMIVVDSPGQEELNQLDVKASSETSSVEASIEMSLPPPLPGF
EDSSDKRRLPPDQESLTRLEQQDLSSEMAKVSNPRASKPSGRRGGRTPRGAKRPQQRKPP
SAPLVPGLLDQSNPLSTPMPKKRSQKSKGDLLLLKLSKGLDQPESPHPKRPPEDFETPSG
ERPRRRAAQVVSLPNPGWPRTCDPPNSASRVLGLQACATTPGSPSHFSQTSPRALLYLQE
LAEELSTALPAPLSGPKSPKVSSPTKPKKTRQAASQGEEDGRARDEDFVLQVEGEDEEES
EAPSENSSDPEPVAPRSTPRGPAAGKQKPHCRGMAPNGLPNYIMAPVWKCLHLTKDLREQ
QHSFWEFAEWIPVAWKWQLLSELEAAPYLPQEEKSPLFSVQREGIPEDGTIYRINRFSSI
TAHPERWDVSFFTGGPLWALDWCPVPEGSAASQYVALFSSPDMNETHPLSQLHSGPGLLQ
LWGLGTLQQESCPGNRAHFVYGIACDSGCIWDLKFCPSGAWEHPETLRKAPLLPRLGLLA
LACSDGKVLLFSLPHPEALLAQQPPDAMKPAIYKVQCLATLQVGSVQASDPSECGQCLSL
AWMPTRPHHHLAAGYYNGMVVFWNLPTNSPLQRIRLSDGSLKLYPFQCFLAHDQAVRTIQ
WCKANSHFLVSAGSDRKIKFWDLRRPYEPINCIKRFLSTELSWLLPYNGVTVAQDNCYAS
YGLCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTVAAGDISGELIAAILPDMASN
PINVKKPAERRFPIYKADLIPYQDSPEDQDYSSTSSETPNPPKARTYTETINHHYLLFQD
TDLSSFHNLLRREPMLRMQEGEGHSQLCLDRLQLEAIHKVRFSPNLDSYGWLVSGGQSGL
VRIHFVRGLTSPLAHRVQLESRANFNAMFQPSFPTEGPGFSPSSHCLLPNP
NT seq 2856 nt   +upstreamnt  +downstreamnt
atggatacctgcggggtcggctatgttgccctgggggaggccgaccccgtggggagcatg
attgtggtagactctcctggacaagaagaactaaaccagctggatgtcaaggcctcctca
gaaacgtccagtgtggaggcctccatcgagatgtcactacctcctcctctgcctggattt
gaggattcttctgacaagaggaggcttcctccagatcaggagagcctcaccagattggaa
cagcaagatctttcttcagagatggcaaaggtctcaaaccctagggcctcaaagccttcc
gggaggagaggtggtaggacaccaagaggcgctaaaaggcctcagcaacgtaaacctcca
tccgcccctctggttcctggtcttttagatcagtccaaccctctgtccacccccatgcct
aagaaacgaagtcaaaagtccaagggagacctgctactattgaagttgtccaaaggccta
gatcagccagagtctccacatccaaagaggccccccgaggactttgagaccccttctggg
gaacgaccccgccgaagggctgcccaagtggtgtcgctgcccaacccaggttggcctcga
acttgcgatcctcccaactcagcctcccgagtgctgggattgcaggcgtgcgccaccaca
cctggctctccatcacatttttcacagacttcccccagggcacttctgtatcttcaggaa
ctagctgaagaactctccacggccctgcctgcaccgctgtctgggcctaagagtcccaag
gtgagcagccccacgaagccgaagaagacccggcaagcagcctctcagggtgaagaagat
ggacgtgctcgggatgaagactttgttctccaggtcgagggtgaggatgaggaagagagt
gaagccccgagtgagaactcatctgatcctgagcctgtcgcaccccgaagcaccccacgg
ggacctgctgcagggaaacagaaaccacactgccggggcatggctcccaatggcttaccc
aattacatcatggctcctgtttggaagtgcctccacctcaccaaggacctccgagagcag
cagcattcattctgggagtttgctgagtggattccagtagcctggaagtggcagttgtta
tctgaacttgaagcggctccctacctgccccaggaggagaagtctcccctgttttctgta
cagcgtgaagggattcctgaggacggcacaatctaccgaataaacagatttagctcaatc
acagcacatccagagcgctgggatgtgtccttcttcacagggggaccgctctgggctctg
gactggtgcccagtgcctgaagggtcagcagcctcacagtatgtggcccttttctccagc
cctgacatgaatgagacacacccactgagccagcttcattcaggccctgggctgctgcag
ctctggggccttgggacattgcagcaagaaagctgtcctggcaacagggcccactttgtc
tatgggattgcttgtgacagtggctgtatctgggacctcaagttctgccccagcggggca
tgggaacatccagaaacccttcggaaggctcctctcctgcctcgcctgggtctcttggct
ctggcctgctcagatgggaaggtactgctgttcagtctgccgcatcctgaggccctcctg
gctcagcagcccccagatgctatgaaacctgccatctacaaggtccagtgtttggcaact
cttcaggtggggtctgtacaagcttcagacccctctgagtgtggtcagtgccttagcctg
gcttggatgcctaccaggcctcaccaccacctggctgctggatactataatggcatggta
gttttctggaatcttcccactaactcgcccctccaaaggatacgactctctgatggctcc
ttaaagctgtaccccttccagtgtttcctagcccatgaccaggctgttcgtacaattcag
tggtgcaaagctaacagtcatttcctggtgtctgcagggagtgaccggaaaatcaagttc
tgggatcttcgacgaccttatgaaccaataaattgtatcaagcgcttcttgagtacagag
ctttcctggctgctcccctacaatggtgtcacagtggctcaagacaactgttatgcctct
tacgggctctgtggaattcattacattgatgcgggttaccttggttttaaggcctacttt
actgctccacggaaaggcactgtctggagtctttcaggttcagactggcttgggacagta
gctgcaggagatatatccggggagctcattgcagctattttacctgacatggcgtcaaac
ccaatcaatgtcaagaaacctgcagaaagaagatttcctatatataaagcagatctgata
ccataccaggacagccctgaagaccaagactactcctcgacctcctctgagacccccaac
cctcccaaggcgaggacctacactgagaccatcaaccaccactacctgctctttcaagac
acagatctgagctccttccacaatctgcttcgtagagaaccgatgcttcgcatgcaggaa
ggagaagggcattctcagctttgcctggacaggctgcaacttgaagctattcacaaggta
cgtttcagcccaaacctggactcctatggatggctggtatctggggggcagtcagggctg
gttcggatccattttgtccgtggactcacctccccgctggcccaccgtgtacagcttgaa
agccgagccaacttcaatgctatgttccaaccatcctttccaactgaagggcctggtttc
tctccaagcagccattgccttctccctaatccctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (17)   
   UniProt (1)   
   RefSeq(pep) (16)   
DNA sequence (24)   
   RefSeq(nuc) (16)   
   GenBank (4)   
   EMBL (4)   
Protein domain (1)   
   Pfam (1)   
All databases (51)   

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