KEGG   Rattus norvegicus (rat): 313961
Entry
313961            CDS       T01003                                 
Symbol
Smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6
  KO
K22804  structural maintenance of chromosomes protein 6
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    313961 (Smc6)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     313961 (Smc6)
SSDB
Motif
Pfam: AAA_23 SMC_N AAA_21 AAA_15 TPR_MLP1_2 DUF3993 AAA_29 DUF4931_N
Other DBs
NCBI-GeneID: 313961
NCBI-ProteinID: NP_001101484
RGD: 1311214
Ensembl: ENSRNOG00000004908
UniProt: D4AB26 A6HAP6
Position
6:39697810..39752275
AA seq 1097 aa
MAKRKEENFCSPENAKRPRQEELEDFDKDGDEDECTISFTNGTSTLTAAEVGIIESIQLR
NFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLKGFVKAGQ
NSADISITLRNRGDDAFRANVYGDSIVVQQHISVDGSRSYKLKSEKGTVVSTRKEELIAI
LDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMETKERTK
EQINQGEERLTELKRQCLEKEERFQNIAGLSTMKTNLEYLKHEMAWAVVNEIEKQLNAIR
DNIKIGEERAAKLDRKMEEQQVRLNDAEKKYKDIQDKLEKISEETNARAPECMALKTDVI
ARTRAFNDAEVLYNRSLNEYKALKKDGEQLCKRIEELKKSTDQSLEPERLERQKRICWLK
EKVKALQDQENTVNQEVEQFEQAIEKDKQEHVRIKREDVEVRHTLSYNQRQLKELKDSKT
DRLKRFGPHVPALLEAIDDAYRRRQFTHKPIGPLGACIHLRDPELALAIESCLKGLLQAY
CCHNHADERVLQSLMKKFYPPGTSRPQIIVSEFRNEVYDVRLRAAYHPEFPTVLTALEID
NAVVANSLIDMRSIETVLLIKNNSVARAVMQSQKPPKNCREAFTADGDQVFAGRYYSSES
TRPKFLSRDVDSEISDLETEIENKKGHIMNLQHRLSALEKDIKRNEELLKRCQLHYKEIK
MKIRKNISEIRELENIEEHQSVDIATLEDEAEENKIKMQMVEKNMEQQKENMENLKTLKI
EAENKYDTIKLKINQLSELADPLKDELNLADSEVDSQKRGKQHYEDKQKEHMDTLNKKRR
ELDMKEKELQEKMSQARQICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIMKQ
YQEARETYLDLDSKVRTLRRFIKLLEEIMTHRYKTYQQFRRCLTLRCKLYFDNLLSQRAY
CGKMNFDHKNETLSISVQPGEGNKASFNDMRALSGGERSFSTVCFILSLWSIAESPFRCL
DEFDVYMDMVNRRIAMDMILKMADSQRFRQFILLTPQSMSSLPSSKLIRILRMSDPERGQ
TTLPFRPVTQEEDDSAS
NT seq 3294 nt   +upstreamnt  +downstreamnt
atggccaaaagaaaggaagaaaatttttgctctcctgaaaatgctaaaagaccaagacag
gaagaactggaagattttgataaagatggagatgaggatgaatgtacaatttctttcaca
aatggaacctccactttgactgcagcagaagttggaataattgagagtattcagctaaga
aatttcatgtgccattcaatgcttggaccttttaagtttggttctaatgtcaactttgtg
gttggcaataatggaagtgggaagagtgctgtgctcactgcactcatagttggtcttggt
ggaaaagcagttgctactaacagaggatcctctttaaaaggttttgtgaaagctggacag
aactcagcagatatctcaataacattaaggaacagaggagatgatgccttcagggcaaac
gtgtatggtgactccatagttgtgcaacaacacattagcgtggatggaagtcgatcttac
aaactaaaaagtgaaaaaggcaccgtggtttctacaaggaaggaagagctgatcgcaatt
cttgaccattttaacatccaggtggataatccagtttccgttttaacacaagagatgagc
aagcaattcttacaatccaaaaatgagggagacaaatacaaattcttcatgaaagcaacc
caattggaacagatgaaggaagattattcatatattatggaaacgaaagaaagaacaaag
gagcaaataaatcagggagaagagcgacttactgagctaaagcgccagtgcttggagaaa
gaggaacgttttcaaaatattgctggtttaagtacaatgaagacgaatttagagtatttg
aaacatgaaatggcatgggctgtggtcaatgaaattgaaaaacagttgaatgctattcga
gataatatcaaaattggagaagaacgcgctgccaaacttgacaggaaaatggaagagcag
caggtcagacttaatgatgcagaaaaaaaatacaaagatatacaagataaactagaaaaa
attagtgaagagacaaatgcacgagcaccagaatgtatggccttgaaaacagatgtcatt
gcaagaacaagagcctttaatgatgctgaggttttatataatcgttccctaaatgaatat
aaagcattaaaaaaagatggtgaacagctttgtaaaagaattgaagagctgaagaaaagt
accgaccagtcattagaaccagagcgattggaaaggcaaaaaaggatctgctggttaaaa
gagaaagtaaaggccttacaggatcaggaaaatacagtcaatcaggaggttgaacagttc
gagcaagccatagaaaaggacaaacaagaacacgtccgaattaagagagaagatgtagaa
gtgagacatacactcagctataatcagagacaattgaaagaactgaaagatagtaaaact
gatcgactaaaaagatttggtcctcatgttccagctcttctggaagcaatagatgatgct
tacagacggagacagtttacccataaacctattggccctttaggtgcttgcattcatcta
cgggaccctgaacttgcattggccattgagtcttgcttaaaaggacttctgcaagcctat
tgctgccataatcatgctgatgaaagagtacttcagtcattgatgaaaaagttttatcca
ccagggacctctcgaccacagataatcgtttcggaatttcggaatgaggtatatgatgtg
agactcagagctgcttaccatccagagtttccaactgttctgacagctttagaaatagac
aatgctgttgttgcaaacagtctgattgacatgcggagcatagagacagtgctgctgatc
aaaaataattctgtagctcgtgcagtcatgcagtcccaaaagccacccaaaaattgtaga
gaagcttttactgctgacggtgatcaagtttttgcaggacgttattattcatctgaaagt
acaagacccaagtttctaagcagagatgtggattctgaaataagtgacttggaaactgag
attgaaaataaaaagggccacataatgaaccttcagcaccgtctgtctgctcttgagaag
gatattaaacgcaatgaagaacttcttaaaaggtgccaactacattataaagaaataaag
atgaaaataagaaaaaatatttctgaaattcgggaacttgagaacatagaagaacaccaa
tctgtagatattgcaaccttggaagatgaagcggaggaaaataaaataaaaatgcaaatg
gtggagaaaaatatggagcaacaaaaagaaaacatggagaatcttaaaactctaaaaatt
gaagcagaaaacaagtatgatacaattaaattgaagattaatcagctatcagagctagca
gatccacttaaggatgaattaaatcttgctgactctgaagtggatagccagaaacgggga
aagcagcattatgaagataaacagaaagaacatatggataccctaaataaaaagagaaga
gagcttgacatgaaggaaaaggagctacaggagaaaatgtcgcaagcaagacagatctgc
ccagaacgcatagaagtaaaaaaatctgcatcaattctagacaaagaaattaatcgatta
agacaaaaaattcaggcagaacatgctagtcatggagatcgggaagaaataatgaagcag
taccaggaagcaagagaaacctatcttgatctggatagtaaagtaaggactttaagaagg
ttcattaaattacttgaagaaataatgacccataggtacaaaacataccaacaatttaga
aggtgtctgacactacgatgcaagttatactttgacaacttattatctcagcgtgcttat
tgtggaaaaatgaattttgaccacaagaatgaaactcttagtatatcagttcagcccgga
gagggaaacaaagcctccttcaatgacatgcgtgctttgtccggcggcgagcgctctttt
tccacagtgtgcttcattctttccctgtggtccattgctgaatcacctttcagatgcctg
gatgagtttgatgtctacatggatatggttaataggagaattgcgatggacatgatcctt
aagatggcagattcccaacgttttagacagtttatcttgcttacccctcaaagcatgagc
tcacttccttcaagtaaactgattcgaattcttcgaatgtctgaccctgaaagagggcaa
accaccttgcccttccgacctgtgactcaagaagaagatgacagtgcaagctga

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