KEGG   Rattus norvegicus (rat): 314280
Entry
314280            CDS       T01003                                 
Symbol
Smoc1
Name
(RefSeq) SPARC-related modular calcium-binding protein 1 isoform 1 precursor
  KO
K24354  SPARC-related modular calcium-binding protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:rno00536]
    314280 (Smoc1)
Glycosaminoglycan binding proteins [BR:rno00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   314280 (Smoc1)
SSDB
Motif
Pfam: Thyroglobulin_1 Thyroglob_assoc Kazal_2 SPARC_Ca_bdg CFAI_KAZAL DUF6233 EF-hand_7 Kazal_1
Other DBs
NCBI-GeneID: 314280
NCBI-ProteinID: NP_001002835
RGD: 1303126
Ensembl: ENSRNOG00000005998
UniProt: Q6IE50
Position
6:106432592..106593956
AA seq 452 aa
MLPARVRLLTPHLLLLLVQLSPAGGHRTTGPRFLISDRDPPCNPHCPRTQPKPICASDGR
SYESMCEYQRAKCRDPALAVVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECGED
GSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGPVTDKPLSQGNSGRKDDGSKP
TPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNVRNSEKVHSCDQERQSALEEARQN
PREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVMPSCESDARAKSV
EVDDPFKDRELPGCPEGKKMEFITSLLDALTTDMVQAINSAAPTGGGRFSEPDPSHTLEE
RVAHWYFSQLDSNSSDDINKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKAISLPEL
KGCLGVSKEGGSLGSFPQGKRAGTNPFIGRLV
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgctgcccgcgcgcgtccgtctgctcacgccccacttgctgctcctgttggtgcagttg
tccccggccggcggccaccgcaccaccggccccaggtttctaataagtgaccgtgaccct
ccgtgcaacccccactgccccaggactcaacccaagcccatctgcgcgtctgacggcagg
tcctatgagtccatgtgtgagtaccagagagccaagtgccgagaccctgccctggccgtg
gtccatcgaggtagatgcaaagatgctggccaaagcaagtgtcgcctggagagggctcag
gccttggaacaagccaagaagccccaggaggctgtgtttgtcccagagtgtggcgaggat
ggttccttcacacaggtgcagtgtcatacgtacacagggtactgctggtgtgtcacccca
gacgggaagcccatcagtggctcgtccgtgcagaataaaactcctgtatgttcaggtcca
gtcactgacaagcccttgagccagggtaactcaggaaggaaagatgatggctctaaaccc
acgcccacgatggagacccagcctgtgttcgatggagatgaaatcacagcccctacctta
tggattaagcacttggtaatcaaagactccaaattgaataacaccaatgtaagaaattca
gagaaagtccattcttgtgaccaggagagacagagcgccctggaagaggcccggcagaat
cctcgagagggcattgtgatccccgagtgtgctcctggtgggctctataagccggtgcaa
tgccaccaatccacgggctactgctggtgtgtcctagtggacacaggacgcccattgccg
gggacttccacacgctatgtgatgccaagttgtgagagtgacgccagagccaagagtgta
gaggtggatgaccctttcaaggacagggagttaccaggctgtcctgaagggaagaagatg
gaatttatcaccagcctgctggatgccctcaccacagacatggttcaggccattaactca
gcagcgcccactggaggtgggaggttctcagagccagaccccagccacaccctggaggag
cgggtggcacactggtacttcagccagctggatagcaacagcagtgatgacattaacaag
cgggagatgaaaccgttcaagcgctatgtgaagaagaaagccaagcccaagaagtgcgcc
cggcgcttcaccgactactgtgacctgaacaaggataaggccatctcgctgcctgagctg
aagggctgcctgggtgttagcaaagaaggtggtagccttggcagcttccctcagggaaaa
cgagcaggcacaaatccattcattggacgtctcgtctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (34)   

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