KEGG   Rattus norvegicus (rat): 314320
Entry
314320            CDS       T01003                                 
Symbol
Mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3
  KO
K08739  DNA mismatch repair protein MLH3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    314320 (Mlh3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    314320 (Mlh3)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     314320 (Mlh3)
SSDB
Motif
Pfam: MutL_C DNA_mis_repair HATPase_c_3 HATPase_c Spo12 WW
Other DBs
NCBI-GeneID: 314320
NCBI-ProteinID: NP_001101513
RGD: 1309227
Ensembl: ENSRNOG00000006699
UniProt: A6JE18 D4ADG4
Position
6:complement(110612535..110649408)
AA seq 1442 aa
MIRCLSDEVQAKLRSGLALSSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLG
MAGDDVEKVGNRYFTSKCHSVRDLENPTFYGFRGEALASIADMASAVEISSKKSTTLKTF
VKMFQNGKALAAREADLTRPSVGTTVTVYNLFYQFPVRRKSMDPRLEFEKVRQRVEALSL
MHPSISFSLRNDVSGSMILQLPKTKDICSRFCQIYGLGKSQKLREIHYKYKEFEFNGYIS
SEAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSSPRHRSAS
ELHGIYVINVQCPFCEYDVCIEPAKTLIEFQNWDTVLICVQEGIKKFLKQEKLFVELSSE
DIKEFNEDNGFSLIGTTLQTQSTHEKCDQSSFQEACNNILDSYEMFNLQSKAVKRIATLE
NRTTQNSGDSGAIRKKTEDSYTYESDDLGHRKTVESALYNSDSAYLGSRMSEEDIAKTSH
AGENEKWKKSLLENRTSERPHETSPKMFSSPIQTHHPLEESEADLEIEMKSSTVNVMAAN
IPPNSEIQSQLEQLEDAPEVECQPLPFETTLLRAQGTLKKKERKKELSSHGRVNVFSYGQ
VKLCSTGFITHVVQREPAKSPETEQLFKNYARPGPVSAQEAFGNRTHHASETPDSSSLTS
TLSKESTQPPHKRFCRTNTGYGTENKPVATDDNLALFQGSRKESHTDCFLPDTTSFPWCR
NVSGGYKKKGKVGSFKHVVRRKLSLRSQIGSLEKFKRQYGKVNNSLAAEEDNDTDFRTHL
EPHNEPDVLLKDKSLSDMSDGGEITPSEHSDGCQPLRPILYPETLSKEDRLEQRPSLRES
PITLAELLHGNRKPSEVKKSTEALASKLSRLKDSEKEMQTMEMAGPVSERPDSDPSWKDN
SQCARLDLNFCELYKNKLEKTESEVLPMPDSAPEDDSINKNSVLCSNSVTDDREKPETSL
LLPCSDSKISKDSDVLIRVSEQQSGSPDSASREVTRQVEDSAGSQCGICSQSHGFKARSC
SDNEESSTHSMDWQQHFDVTLGRTVYINRMTGLSTFVAPTDDIQTPCTKDLTTVAVDVLL
GNGVQYRCHPFRSDLVLPFLPRAQEERTRRRHNRDAVDAAAVSEPLQSLFSEWSNPVFAR
YPEVAVDVSSGQAGSLAVKIHNVLYPYRFTKEMIHSVQVLQQVDNKFIACLMSSRTDGSG
QAGGNLLVLVDQHAAHERVRLEQLITDSYEKQAPQSAGRKKLLSSTIIPPLAITVSEEQR
RLLRSYHKHLEDLGLELLFPDASDSSILVGKVPLCFVEREANELRRGRSPVTKSIVEELI
REQLELLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDRLSLEESCRLIEALSLCQLPFQ
CAHGRPSMLPLADLDHLEQEKQVKPNLTKLRKMAHAWHLFGKAEGCDTKQEPQQPVPPCE
PP
NT seq 4329 nt   +upstreamnt  +downstreamnt
atgatcaggtgtctgtcagatgaagtacaagccaagttgcgttctggtttagccctaagc
tccttaggccagtgtgttgaggaacttacccttaacagtattgatgctgaggcaacatgt
gtggccatcagagtgaatatggaaaccttccaagttcaagtgatagacaacggacttggg
atggcgggggatgacgtggagaaggtggggaaccggtattttactagtaaatgccactca
gtacgggacctggagaacccaacgttttacggtttccgaggcgaggccttggcaagtata
gctgacatggctagtgctgtggaaatttcatccaagaaaagcacaacattgaagaccttt
gtgaagatgtttcagaacggaaaagccctcgccgcccgtgaggcggacttgaccagaccg
agtgtggggactacagtgacggtctataacctgttttaccagtttcctgtgcggaggaaa
agcatggaccctagactagagtttgagaaggttaggcagagggtggaagccctctcactt
atgcacccctccatttctttctctttgaggaatgacgtttctggttccatgattcttcag
ctccctaaaaccaaagacatatgttctcggttttgtcaaatttatggattgggcaagtcc
caaaagttaagagaaatacattataagtataaggaatttgagtttaatggctacatcagc
tctgaagcacactacaataagaatatgcagtttttgtttgtgaacagaagactagtttta
agaacaaagttgcataaacttattgactttttattaaggaaagaaagtattatatgcagg
ccaaagaatggctctgccagtaggcaaatgaattcaagtcctcgacaccgttctgcctca
gaactccatgggatatatgtaatcaacgtgcagtgcccgttctgtgagtatgatgtctgc
atagagccagccaaaactctgattgaattccagaactgggataccgtgttgatttgtgtt
caggaaggaataaaaaagtttttaaagcaagaaaaattatttgtagaattatcaagtgaa
gatattaaggaatttaatgaagataatggttttagtttgattggtacaacacttcagaca
cagtctactcatgagaagtgtgaccagagcagtttccaggaagcgtgtaataatattttg
gattcctatgaaatgtttaatttgcagtcaaaagctgtgaaaagaatagctactttagaa
aatagaaccacacaaaattctggcgattcaggagctatcagaaaaaagacagaggactca
tacacttatgaatcagatgacctgggccatagaaaaactgtagagtctgcgttatacaac
agtgacagtgcttacttaggatcaaggatgtcagaagaagacatagccaaaacatcacac
gctggagaaaatgagaaatggaaaaaatctttgttggaaaataggacttcagaaaggcca
catgaaaccagtccaaaaatgttttcaagccccattcaaactcatcatccccttgaggag
agtgaggcagatctagaaatagagatgaaaagtagtactgttaatgtcatggctgccaac
attcctccaaatagtgaaattcagagtcaactggagcaacttgaagatgctcctgaagtg
gagtgccaacctctgccctttgagacaacattattaagagcacagggtactctgaaaaag
aaggagagaaaaaaggagctcagtagccatggaagagtaaatgtttttagttatggacag
gttaaattgtgctccactggctttatcactcatgtggtacaacgcgaacccgccaagtca
cctgaaacagaacagttgtttaaaaattatgctcgacctggtcctgtaagtgcccaggaa
gcatttggaaatagaacacaccatgcaagtgagactccagacagcagtagtttaacaagc
actttaagtaaagaatccactcagccgccccacaaaagattctgcagaacaaatacaggt
tatgggacagagaacaaacctgtagcaacagatgacaacttggccctttttcagggaagc
cgtaaagaatcacacacagattgctttttgcctgatacaacctcctttccgtggtgtaga
aatgtttccggtggttataagaaaaaaggtaaagtgggttccttcaaacacgtagtccgt
aggaagctaagcttgcgttcacaaatagggtctttagagaagtttaagaggcaatatggg
aaggttaacaattccctagctgcagaagaggacaatgacactgacttcaggacccatctt
gagcctcacaatgaacccgatgttcttctgaaagataagagcctctcagatatgtctgat
ggtggtgagatcactccatcagagcacagtgatgggtgtcaaccattacgtcccatcctg
tacccagagacactttccaaagaagatcgcttagaacagaggcctagtttgagagaaagt
cctatcactctggcggaattgctccacggtaacagaaaaccttctgaggttaagaagtcc
actgaagccctggcttctaaattatccagactcaaggattctgaaaaagagatgcaaacc
atggagatggcaggtcctgttagtgaacgtccagactcagatcccagttggaaagacaat
agccagtgcgctaggctggacttaaatttttgtgaattatataaaaataaacttgaaaaa
acagagagtgaagtgcttccaatgccagattctgccccagaggatgattccatcaataaa
aacagcgtgctgtgttctaacagtgtaacagatgacagggagaaaccagaaacttccttg
ctgttaccctgtagtgattctaaaatcagcaaagattcagatgttcttatcagagtctca
gagcaacagagtggaagccctgactctgccagcagggaggtaacgcgtcaggtagaagat
agcgccggcagccaatgtggaatctgttcccagagccatgggtttaaagcaagatcttgt
tctgacaatgaagaatcaagtacgcacagtatggactggcagcagcattttgacgtaacc
ctgggaagaacggtttacatcaacagaatgaccgggcttagcacgtttgttgctcctact
gatgacattcagactccttgtactaaagatctgacaaccgtggctgtggatgtcctactt
gggaatggggtccagtacaggtgtcatccttttagaagcgaccttgttcttcctttcctc
ccaagagctcaggaagagaggaccaggcggagacacaacagagatgctgtagatgctgct
gctgtcagtgaaccacttcagtctttgttttcagaatggagcaatccagtgtttgcccga
tacccagaggttgctgttgacgtcagcagtggccaggctgggagcttagccgttaagatt
cacaatgttctatatccctatcgcttcaccaaagagatgatccactcagtgcaggttctc
cagcaagtggataacaagtttatcgcctgcttaatgagctcgaggacggacgggagtggc
caagcaggtggaaacctgttagtcctggtggaccagcacgctgcccatgagcgcgttcgt
ttggagcagctaatcactgattcctatgagaaacaagctccacaaagtgctggccggaag
aaattactgtcttccacaataattcctccactagcgatcaccgtgtcagaggaacaaagg
agactcttacggtcttaccacaaacatttggaagatctgggacttgagttgctctttcca
gatgctagtgactcttcgatcctggtgggaaaagtgccactctgctttgtagaaagagaa
gctaatgaacttcgaagaggacgatctcctgtgactaagagtattgtggaggaattgatt
cgagaacagctggagctgctccagaccacgggaggtatccaagggacactgccgctgact
gtccagaaggtgttggcctcccaggcctgccacggggccattaagtttaatgatcgtctg
agtctggaggagagctgtcggcttatcgaagctctgtccttgtgccagctgccatttcag
tgtgctcatgggcgaccttcaatgctgcccttagctgacctggaccacttggagcaggaa
aaacaggttaaacccaatcttactaaacttcgcaaaatggctcatgcctggcatctcttt
ggaaaagcagaaggctgtgatacaaagcaggagccacaacagcccgtacctccttgtgag
ccaccgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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