KEGG   Rattus norvegicus (rat): 314329
Entry
314329            CDS       T01003                                 
Symbol
Irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
  KO
K22383  interferon regulatory factor 2-binding protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    314329 (Irf2bpl)
   04121 Ubiquitin system [BR:rno04121]
    314329 (Irf2bpl)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    314329 (Irf2bpl)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Atypical E3
   314329 (Irf2bpl)
SSDB
Motif
Pfam: IRF-2BP1_2 zf-C3HC4
Other DBs
NCBI-GeneID: 314329
NCBI-ProteinID: NP_001012488
RGD: 1310994
Ensembl: ENSRNOG00000011026
UniProt: Q5EIC4
Position
6:complement(112258149..112262264)
AA seq 782 aa
MSAAQVSSSRRQSCYLCDLPRMPWAMIWDFSEPVCRGCVNYEGADRIEFVIETARQLKRA
HGCFQDGRSPGPPPPVGVKTVALSAKEAAAAAAAAQQQQQQQQQQQQQQQQPQQLNHVDG
STKPAVLPAPSGLERYGLSAAAAAAAAAAAAVEQRSRFEYPPPPVSLGSSSHAARLPNGL
GGPNGFPKPAPEEGPPELNRQSPNSSSAATSVASRRGTHSGLVTGLPNPGGGGGPQLTVP
PNLLPQTLLNGPASAAVLPPPHGLGGSRGPPTPAPPGAPGGPACLGGPPGVSATVSSAPS
STSSTVAEVGVGAAGKRPGSVSSTDQERELKEKQRNAEALAELSESLRNRAEEWANKPKM
VRDTLLTLAGCTPYEVRFKKDHSLLGRVFAFDAVSKPGMDYELKLFIEYPTGSGNVYSSA
SGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHGSGDWRLLGDLLPEAVRFFKEGVPGADM
LPQPYLDASCPMLPTALVSLSRAPSAPPGTGALPPAAPTGRGAAASLRKRKASPEPPDSA
ESALKLGEEQQRQQWMANQSEALKLTMSAGGFAAPGHAAGGPPPPPPPLGPHSNRTTPPE
SAPQNGPSPMAALMSVADTLGTAHSPKDGSSVHSTTASARRNSSSPVSPASVPGQRRLAS
RNGDLNLQVAPPPPSAHPGMDQVHPQNIPDSPMANSGPLCCTICHERLEDTHFVQCPSVP
SHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGDVKVKKER
DP
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgtcggcggcgcaggtgtcctcgtcccggagacagtcttgctacctgtgcgacctgcct
cgcatgccctgggccatgatctgggacttctccgaacccgtatgccgtggttgcgtcaat
tacgaaggcgccgaccgcatagaattcgtgatcgagacagcacgccagctgaagcgggcg
cacggttgcttccaagacggccgctcccccgggccgccgccgccagtcggggtcaagaca
gtggccttgtccgccaaggaagcggcagcagcagctgccgccgctcagcaacagcagcag
caacaacaacagcagcagcagcagcagcagcagccacagcagctcaaccacgtcgatggc
tctaccaagcctgcagtgttgcccgccccgtccggtctggagcgctatggcctgagcgca
gcggccgccgcggctgctgccgccgccgccgcggttgaacaacgcagccgtttcgagtac
ccgcctcccccggtgagtctggggagcagcagccacgccgcccggctgcccaacggcctg
ggaggtcccaacggcttccccaagccggcaccagaggagggtcccccggagctgaaccgc
cagagccccaactcatcctcagcggcaacatcggtggcttctcggcgtgggactcatagt
gggctggtgaccgggctgcccaacccgggtggtggcgggggaccccagctcaccgtgccc
cccaacctattgccgcagacgctgcttaatggcccggccagcgccgcggtactgcctccg
ccccatgggctggggggaagccgagggcccccgactccagcacctccgggtgctcctggg
gggcccgcctgtctcgggggtcccccgggtgtgtcggccactgtatcctctgctccgtca
tcgacctcgtcgacagtggcagaggtgggcgtgggtgctgctggtaagaggcctggatcg
gtgtcgagcacagaccaggagcgtgagctaaaggaaaagcagcgcaacgctgaggccttg
gccgagctgagcgagagcctgcgcaaccgcgcggaggagtgggctaacaagcccaagatg
gtccgtgacacgctgctcacgctggctggctgcacgccctacgaggtgcgcttcaagaag
gaccattcgctgttgggtcgtgtctttgccttcgacgcggtctctaagcccggcatggac
tacgagctgaagctgttcattgagtatcccacgggctccggcaatgtgtactccagcgcg
tctggggtggccaaacagatgtaccaggattgcatgaaggactttggccggggtctgtcc
tctggcttcaaatacctggagtacgagaaaaagcatggctctggcgactggcgccttctt
ggggacctactgcccgaagctgtgcgcttcttcaaggagggcgtgcccggcgcggacatg
ctgccccagccctacctagatgccagttgtcccatgctacccacggcgctggtgagtctc
agccgcgcccccagcgcacctccaggaactggagccttgccacccgcggcgcccacgggc
cggggtgcagcagccagcctgcgcaaaaggaaggcatccccggagcctccagactcagct
gaaagcgcactgaagctcggtgaggagcagcagaggcagcagtggatggcaaaccagagc
gaggcgctgaagctcactatgtccgcggggggctttgcggcgccgggacacgcagcaggg
ggaccgcctccaccccctccacctctgggacctcattccaatcggaccaccccgcccgag
tcagccccccagaacggtccgtcccccatggccgcgctcatgtcagtagcagacactttg
ggcacagcgcattcgcccaaggatggcagttcagtgcactccaccactgcatctgctagg
cgaaacagcagcagcccggtgtcgcctgcctccgtgccggggcagcgtcgcctggcatca
cgcaatggggacctgaatttacaggtggcacccccaccgcctagcgcccacccgggcatg
gaccaagtgcacccccaaaacattccggattcccctatggccaacagcgggcccctctgc
tgtaccatttgccacgaacgtttggaggacactcatttcgttcagtgtccatccgtccct
agccacaaattttgtttcccttgttctagagagagtatcaaagcccagggggccacaggt
gaggtgtattgccccagcggagagaaatgccccctagtcgggtctaatgtaccttgggcc
ttcatgcagggcgaaatcgcaactatcttagctggggatgttaaagtgaaaaaagagaga
gacccttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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