KEGG   Rattus norvegicus (rat): 314417
Entry
314417            CDS       T01003                                 
Symbol
Papola
Name
(RefSeq) poly(A) polymerase alpha
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    314417 (Papola)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    314417 (Papola)
Enzymes [BR:rno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     314417 (Papola)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     314417 (Papola)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 Polbeta
Other DBs
NCBI-GeneID: 314417
NCBI-ProteinID: NP_001101526
RGD: 1308673
Ensembl: ENSRNOG00000004827
UniProt: A6KBD5
Position
6:130446236..130499371
AA seq 739 aa
MPFPVTTQGSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQR
RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI
LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW
DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK
LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS
FPAPKESPDREEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFELD
MKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEGVKLAALNDSSLDLSMDSDNSMSVPSPTS
AMKTSPLNSSGSSQGRNSPAPAVTAASVTSIQASEVSVPQANSSESPGGPSSESIPQTAT
QPAISPPPKPTVSRVVSSTRLVNPSPRPSGNAATKVPNPIVGVKRTSSPHKEESPKKTKT
EEDETSEDANCLALSGHDKTETKEQVGMETSAAPSEAAPASASLVASQKTSSTDLSDIPA
LPANPIPVIKNSIKLRLNR
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgccgtttccagttacaacgcagggatcacaacaaacgcagccgccacagaggcactat
ggcattacctctcctatcagcttagcagcccccaaggagaccgactgcctactcacacag
aaactcatcgagacgctgaagccctttggggtttttgaagaagaagaggaactgcagcgc
aggattttaattttgggaaaattaaataacctggtgaaagaatggatacgagaaatcagt
gaaagcaagaatcttccacaatctgtaattgaaaatgttggaggaaaaatttttacattt
ggatcctacagactaggagtacatacgaaaggtgctgatattgatgcgttgtgtgttgca
ccaagacatgttgatcgaagtgattttttcacctcattctatgataaattgaaattacaa
gaagaagtgaaagatttaagagctgttgaagaggcatttgtaccagttatcaaactctgt
tttgatggaatagagattgatattttgtttgcaagattagcactgcagactattccagaa
gatttggacctacgagatgacagtctgcttaaaaacctagatataagatgcataagaagc
cttaatggttgcagggtaaccgatgagattttacatctagtaccaaacattgacaacttc
aggttaactctgagagccatcaaactgtgggccaaacggcacaacatctattccaatata
ttaggtttcctcggtggtgtttcctgggctatgctagtagcaagaacttgccagctttat
ccaaatgcaatagcatcaactcttgtacataaatttttcttggtattttctaaatgggaa
tggccaaatccagtgctattgaaacagcctgaagaatgcaatcttaatttgcctgtgtgg
gacccaagggtaaaccccagtgataggtaccatcttatgcctataattacaccagcatac
ccacaacagaactccacgtacaatgtgtccgtttcaacacggatggtcatggttgaggag
tttaaacaaggtcttgctatcacagatgaaattttgctgagtaaggcagagtggtccaaa
ctttttgaagctccaaacttctttcaaaagtacaagcattatattgtacttctagcaagt
gcgcccacggaaaagcagcgtctggaatgggtgggcttggtggaatcaaaaattcgtatc
ctggttggaagtttagagaagaatgagtttattacactggctcatgtgaatccccagtca
tttccagcccccaaggaaagtcctgatagggaagaatttcgcacaatgtgggtgattggt
ttagtgtttaaaaaaactgaaaactctgagaatctcagtgtggacctcacctatgatatc
cagtctttcacagacacagtttataggcaagcaataaacagcaagatgtttgagttggat
atgaagatcgcagcaatgcatgtgaagagaaagcagctccaccagctgctgccaagtcat
gtgcttcagaagaggaagaagcattcaacagaaggagtcaagttagcagctctgaatgac
agcagccttgacttgtctatggacagtgataacagcatgtctgtgccttcacccaccagt
gctatgaagaccagtccattgaacagttctggcagctctcagggcagaaacagtcctgct
ccagctgtgaccgcagcatctgtgaccagcattcaggcttctgaggtttctgtaccacaa
gcaaattccagtgaaagcccagggggtccatcgagcgaaagcattcctcaaactgccaca
cagccagccatttctccaccaccaaagcctacagtctccagagttgtctcctcaacacga
ctggtaaacccgtcgcctagaccttcaggaaacgcagcaacaaaagtacctaatcctata
gtaggagtcaagagaacgtcctcaccccataaagaagaaagtcctaagaaaaccaaaaca
gaagaggatgaaacaagtgaagatgctaactgtcttgctttgagtggacatgataaaaca
gagacaaaggaacaagttggcatggagacaagtgcggctccgtcagaagctgctccggcc
tcggcgtctctggtggcctctcagaaaacatccagtacagacctttccgatatccctgct
ctccctgcaaaccctattcctgttatcaagaattcaataaaactgagactgaatcggtaa

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