KEGG   Rattus norvegicus (rat): 314537
Entry
314537            CDS       T01003                                 
Symbol
Abcb5
Name
(RefSeq) ATP-binding cassette sub-family B member 5
  KO
K05660  ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    314537 (Abcb5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    314537 (Abcb5)
Transporters [BR:rno02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    314537 (Abcb5)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N Zeta_toxin ABC_ATPase DEAD AAA_22 AAA_16 RsgA_GTPase AAA_5 AAA_30 Rad17 AAA_7 AAA_29 AAA_28 AAA_33 AAA_14 AAA_18 AAA_21 AAA_15 G-alpha NACHT SRP54 nSTAND3 NTPase_1 AAA_24 ResIII DUF3703
Other DBs
NCBI-GeneID: 314537
NCBI-ProteinID: XP_006240775
RGD: 1566342
Ensembl: ENSRNOG00000006398
UniProt: D4AEL4
Position
6:complement(145978860..146075776)
AA seq 1255 aa
MAHSERANGLQESNQRYGSLQEQLPKAGNQAVGPIEIFRFADNLDIVLMTLGILASMING
ATVPLMSLVLGEISDHFINGCLVQTNKTKYQNCSQSQEKLNEDIIMLTLYYVGIGAAALV
LGYVQISFWVITAARQTTRIRKQFFHSILAQDISWFDGTDICELNTRMNGDISKLCDGIG
DKIPLMFQNISGFSIGLVISLIKSWKLSLAILSTSPLIMAASALCSRMVISLTSKELDAY
SKAGAVAEEALSSIRTVTAFGAQEKEIQRYTQNLKDAKDAGIKRAIASKLSLGAVYFFMN
GAYGLAFWYGTSLIFGGEPGYTVGTILAVFFSVIHSSYCIGSVAPHLETFTIARGAAFNI
FHVIDKKPNIDNFSTAGYKPESIEGNIEFKNVSFSYPSRPSAKILKGFNLKIKSGETVAL
VGPSGSGKTTTVQLLQRLYDPEEGCITVDENDIRTQNVRHYREQIGVVSQEPVLFGTTIG
NNIKFGREGVSEEEMEQAAREANAYDFIMAFPKKFNTLVGEKGAQMSGGQKQRIAIARAL
VRNPKILILDEATSALDTESESLVQAALEKASKGRTTLVVAHRLSTIRGADLIVTMKDGE
VVEKGIHAELMAKQGLYYSLAVAQDIKKVDEQMESRTCSAAGNASNGSLCNVNSAKSPCT
DQFEEAVPHQKTTLPEVSLLKIFKLSKSEWPFVVLGTLASALNGSVHPAFSIIFGKLVTM
FEDKNKTTLKQDAELYSMMLVVLGIVALVTYLMQGLFYGRAEEILAMRLRHSAFKAMLYQ
DMAWYDEKDNSTGALTTTLAVDVAQIRGAATSRLGIITQDVTNMSLSILISFVYGWEMTL
LILSFAPILAVTGMIQTAAMAGFANKDKQELKRAGKIATEAVENIRTVVSLTREKAFEHM
YEETLRTQHRNALKRAHITGSCYAVSHAFVHFAHAAGFRFGAYLIQAGRMTPEGMFIVFT
AIAYGAMAIGETLVWAPEYSKAKAGAAHLFALLKNKPSIDSCSQNGEKPDACEGNLEFRE
VSFFYPCRPEVPVLQDMSLSIEKGKTVAFVGSSGCGKSTCVQLLQRFYDPMKGQVLLDGV
DVKELNVQWLRSQTAIVSQEPVLFNCSIAENIAYGDNSRMVPLEEIKEVADAANIHSFIE
GLPGKYSTQVGLRGMHLSGGQKQRLAIARALLRKPKILLLDEATSALDNESEKMVQQALD
KARRGRTCLVVAHRLSTIQNADMIVVLQNGRIKEQGTHQELLRNGETYFKLATAH
NT seq 3768 nt   +upstreamnt  +downstreamnt
atggcacattctgaaagagccaacgggttgcaagaaagtaatcagagatatggatctctg
caagaacaactgcctaaagcaggaaatcaagctgtcggacctattgagatattccgtttt
gctgataatctggacattgtcctcatgactctgggaatactagcatcgatgataaatgga
gccactgttcctttaatgtccctggttttaggagaaataagtgaccattttattaatgga
tgcctagtccaaactaacaaaactaaatatcagaactgttctcagtctcaagaaaagttg
aatgaagatatcattatgttgactctctattatgttgggataggagcagctgccctcgtt
ttgggctacgtgcagatttccttttgggtcataaccgcagcccggcaaaccacaagaatc
cgaaaacagttttttcattcgattttggcacaagacatcagctggtttgatggcactgac
atctgtgaacttaacacccgcatgaatggtgacatcagcaaactctgtgatggtattgga
gataagatccctctgatgtttcagaatatatctgggttttctattggcctcgtgataagc
ttgataaagagctggaaactctcgctggcgattctgtccacgtctcctctcataatggct
gcatcagcactgtgctctaggatggtcatctcattgaccagtaaggagctggatgcctat
tccaaagctggggctgtagctgaagaagctttgtcatcaatccgaacagtcacagccttt
ggagcccaagagaaagaaattcaaaggtatacacagaatctaaaggacgccaaggacgct
ggcataaagagggctatagcttcaaagctgtctcttggagccgtctacttctttatgaat
ggagcctacggactggctttttggtatggaacctccttgatttttggtggagaacctggt
tacaccgtcgggactattcttgctgttttcttcagtgtgatccacagtagttactgcatc
gggtctgtagcccctcacttggaaaccttcactatagccagaggagccgcttttaatatc
tttcatgttattgataagaaacccaatatagataacttttcaacagctggatataaacct
gaatctatagaaggaaacatagaatttaaaaacgtttctttcagctatccatcaagacct
tctgccaagattctgaaaggcttcaatctcaagattaagtctggagagacagtagctttg
gttggtcccagtggcagtggcaagactaccacagtccagcttctgcagaggctgtatgac
ccagaagagggctgtatcacggtagatgagaatgacatccgaacccaaaacgtgcgacat
taccgagagcaaattggagtggtcagccaagagccggttttgtttggtaccaccatcggt
aacaatattaagtttggccgtgaaggcgtgagtgaagaagaaatggagcaggcagcgagg
gaggcaaacgcctacgacttcataatggcctttcctaagaaatttaatacactagtaggg
gaaaaaggagctcagatgagtggaggccagaaacagagaatcgccattgctcgagcgcta
gttcgaaaccccaaaattctaatcctagatgaggctacatctgccctcgacacagagagt
gagtcacttgttcaagccgcactggagaaggcaagcaaaggccggactacacttgtggta
gcacaccggctctccactattcgtggggcagacctgattgtgacgatgaaggatggcgag
gtggtggagaaagggatccatgctgaactaatggcaaagcagggactgtactactccctc
gctgtggcacaggatattaaaaaggtcgatgaacaaatggagtcaaggacatgctccgct
gcagggaatgccagcaatggttctctgtgcaatgtgaatagcgccaagtccccctgcact
gaccagtttgaggaagctgtaccccatcaaaagacaactcttcctgaagtttcactatta
aaaatatttaaattaagcaagtccgagtggccttttgtggttctgggaactttggcttct
gctttaaatgggtctgttcacccagcattttccatcatctttggaaaattggtcactatg
ttcgaagataaaaataaaactacattaaagcaggatgcagagctctactctatgatgtta
gtcgtcttgggcatagtggctcttgtcacctacttgatgcaggggttgttttatggcaga
gcagaagaaattttagccatgaggttaagacactcagcattcaaagccatgctctatcag
gatatggcctggtatgatgagaaagacaacagcactggagccctgaccacaacgttagct
gtggacgtagcacagatccggggtgcagcaacttcaaggcttggtatcataacacaagat
gtgaccaacatgagtttgtccatccttatctccttcgtctatggatgggagatgacactc
ctgattctcagctttgcacctatacttgcagtgacaggaatgattcaaactgcagcaatg
gctggcttcgccaacaaggataagcaagagcttaagcgtgccgggaagatagcaacagaa
gctgtggagaacatacgtacggtagtgtcattaacaagagagaaagcctttgagcacatg
tatgaggagacgctacggacccaacacagaaatgccttgaagagagcacatatcactgga
agctgttatgcggtcagccatgcttttgtgcatttcgcccacgcagcaggtttccggttt
ggagcctatttgattcaagctggacggatgacgcccgaaggcatgttcatagtctttact
gccattgcatatggggctatggccattggagaaacgcttgtttgggctcctgaatattcc
aaagccaaggctggagctgcacatctgtttgctttgctgaaaaataagccaagtatagac
agctgcagtcaaaatggagaaaaaccagacgcctgtgaagggaacttagaatttcgagaa
gtctcgttcttctatccttgtcggccagaagttcctgtccttcaagacatgtccctcagc
attgagaaagggaagacagtagcatttgttgggagcagtggctgtgggaaaagcacgtgt
gttcaactgctacaaagattttatgaccccatgaaaggacaagtgctgcttgacggcgtc
gatgtgaaagaattgaacgtgcaatggctgcgttcccagacagccatcgtctcccaagag
cctgtgctcttcaactgtagcattgctgagaacattgcctatggtgataacagccgcatg
gtgcccttagaggagatcaaagaggtcgcagatgcagccaacatccattctttcattgaa
gggctccccgggaaatacagcacccaagtgggactaagaggcatgcacctttctggcggc
cagaaacaaagactggctattgcaagggctcttctccggaagccgaaaattttactgctg
gatgaggccacttcagcccttgacaatgagagcgagaagatggttcaacaggccctcgac
aaagcccggagagggaggacctgcctagtagtggctcacagactctccacaatacagaat
gcagatatgatcgtcgttctgcaaaatggaagaatcaaggagcaggggactcatcaggag
ctcctgagaaatggagagacttactttaaattagcaaccgcgcattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (28)   
   Pfam (28)   
All databases (41)   

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