KEGG   Rattus norvegicus (rat): 315000
Entry
315000            CDS       T01003                                 
Symbol
Rnf139
Name
(RefSeq) E3 ubiquitin-protein ligase RNF139
  KO
K15703  E3 ubiquitin-protein ligase RNF139 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    315000 (Rnf139)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     315000 (Rnf139)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    315000 (Rnf139)
SSDB
Motif
Pfam: TRC8_N zf-RING_2 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-ANAPC11 zf-C3HC4_3 zf-RING_5 zf-RING_11 zf-RING_UBOX
Other DBs
NCBI-GeneID: 315000
NCBI-ProteinID: NP_001121017
RGD: 1306670
Ensembl: ENSRNOG00000008987
UniProt: A6HRK9 M0RCM9
Position
7:92329201..92340386
AA seq 656 aa
MAQQQVWAALEVALRVPCLYIIDAIFNSYYDSSQSRFCIGLQIFLRLLGIVVSSIVLILS
QRSLFKFYMYSSAFLLAATSVLVNYYAALHIDFYGAYNTSAFGIELLPRKGPSLWMALIV
LQLTFGIGYVTLLHIQSIYSQLIILNILVPVIGLITELPLHIRETLVFMSSLILIFNTML
VLAVKLKWFYYSTRYVYLLVRHMYRIYGLQLLMEDTWKRIRFPDILRVFWLTRITAQATV
LMYILRMANETESFLISWDDFWDIICNLIISGCDSTLTVLGMSAVISSIAHYLGLGILAF
IGSTEEDDRRLGFVAPVLFFILALQTGLSGLRPEERLIRLSRNMCLLLTAVLHFIHGMTD
PVLMSLSASHVSSFHRHFPVLFVSACLFILPVLLSYVLWHHYALNTWLFAVTAFCVELCL
KVIVSLTVYTLFMIDGYYNVLWEKLDDYVYFVRSTGNIIEFIFGVVMFGNGAYTMMFESG
SKIRACMMCLHAYFNIYLQVKNGWKTFMNRRTAVKKINSLPEIKGSHLQEIDDVCAICYH
EFTTSARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDDIKDNSNVSNNNGFIAPNE
NQNPEEALREDAAGSDREMNEDDSTDCDDDIQRERNGGIQHTGAAAAAAEFNDDTD
NT seq 1971 nt   +upstreamnt  +downstreamnt
atggcccagcagcaggtctgggcggcgctcgaagtggcgctccgggtgccctgcctctac
atcatcgacgccatcttcaactcctactacgattccagccaaagccggttctgcatcggg
cttcagatctttctccggctcctcggtatagttgtatccagtattgttctgatcttgtca
cagcgatcacttttcaagttttacatgtacagctcagcctttctattagctgcaacttca
gtgttggtgaactactatgctgctttgcacattgacttctacggtgcctacaacacgtca
gcatttggaattgagttgcttcctcggaaagggccctcactgtggatggcactcatcgtt
ctgcagctaacctttggaatcggatacgtcactctactccacattcagtctatctattca
cagctgattattctgaatatcttggttcctgtaatcggcttaatcacagagctaccatta
cacatcagagagacgttagttttcatgtcttccttgattctcatatttaacacaatgctt
gtcttggcagtgaaacttaagtggttttattactctactcggtatgtttacttgttagtg
aggcatatgtaccgaatttatggattacagttattgatggaggacacatggaagcggatt
cgtttcccagacatacttcgggtcttctggctaacaaggattacagctcaggctacagtg
ttgatgtacattttaaggatggcgaatgagactgagtccttccttatttcttgggatgat
ttctgggacatcatttgcaatctaataattagtgggtgcgattctacactaactgtacta
ggcatgagtgctgtaatttcttcaatagcccattacttgggccttggaatattggccttt
attggatcaactgaagaagatgacaggcggcttggctttgtagcacctgttttatttttc
attttggctcttcagactggtttaagtgggctgagacctgaagagagacttattcgctta
agtagaaacatgtgccttttattaactgcagtcctacatttcatccacggaatgacagac
cccgtgttaatgtctctcagtgcctcccacgtgtcatctttccacagacattttcctgtg
ctgtttgtctctgcttgcctgtttattcttcctgttttactcagttatgtcctttggcac
cactatgcactaaacacgtggctgtttgcagttacagccttctgtgtggaactctgcttg
aaagtaattgtttccctcactgtctacacgctattcatgattgatggctactataatgtc
ctctgggaaaagcttgatgattatgtctactttgttcgctcgacaggcaatattatcgaa
tttatatttggagtagtaatgtttgggaatggggcctataccatgatgtttgagtcagga
agtaaaatccgggcttgtatgatgtgcctacatgcatattttaacatctacttacaagta
aaaaatggctggaagacattcatgaatcgtagaactgctgttaagaaaattaattcactt
cctgaaataaaagggagccacttgcaagaaatagatgatgtttgtgccatctgctatcat
gagttcacaacgtctgctcggattacaccgtgtaaccattatttccatgcactctgcctt
cggaaatggctgtacattcaagatacttgtccaatgtgtcatcagaaagtgtacatcgaa
gacgatatcaaggacaattcaaatgtatctaacaacaacggatttattgcacccaatgaa
aatcaaaacccagaggaagctttaagagaagatgctgctggatctgaccgagaaatgaac
gaggatgacagtacagactgtgatgatgatattcaaagagaaagaaacggggggattcag
cacacaggcgcagcagcagcagcagcagaatttaatgatgacactgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (27)   

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