KEGG   Rattus norvegicus (rat): 315045
Entry
315045            CDS       T01003                                 
Symbol
Pop1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
  KO
K01164  ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    315045 (Pop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    315045 (Pop1)
   03016 Transfer RNA biogenesis [BR:rno03016]
    315045 (Pop1)
   03029 Mitochondrial biogenesis [BR:rno03029]
    315045 (Pop1)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     315045 (Pop1)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     315045 (Pop1)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    315045 (Pop1)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    315045 (Pop1)
SSDB
Motif
Pfam: POP1_N POPLD
Other DBs
NCBI-GeneID: 315045
NCBI-ProteinID: NP_001124022
RGD: 1308609
Ensembl: ENSRNOG00000005243
UniProt: D4AE75 A6HR04
Position
7:67590502..67618187
AA seq 1044 aa
MSNAKERKHAKKMRSQPSNVTLSSGFVTERDGKRHFGGKPSQSQKQELHSGTSRQWQIKM
SPHLLPESDANEQTSSKTMFKKKGGWKAGPEGTSQEIPKYITASTFAQARAAEISAMLKA
VTQKSSNSLVFQTLPRHMRRRAMSHNVKRLPRRLQEMAKKEAEKAAHQKKEHSKNKCHKA
RRCHINRTLEFNRRQQKNIWLETHIWHAKRFHMVKRWGYCLGERPTAKSHRACYRAMTDL
CLLQDLSYYCCLELKGKEEEILKALSQMCSIDTGLTFAAVHCLSGKRQGSLMLYRANKYP
RDMLGPVTFIWKSRETPGDASEERQLWIWLHPTLKLAVLEEIKTTCQCSEPVKPSVCVPA
PLLTPAQEDIQAGLADDKIGKKRKRRDDGENARRAKKTIGDGTGDPCQPRSWLSPTTGIV
VSDLTMEMNRFRLVGPLSHCILTSALRAAPVHRGEEDAEETPHGWWTDTCRSPHGLSLHQ
RQEAVFQLLGGISSPAEIPAGTILGLTVRDPRVNLPPQRCRALPDPERYHVSEFICEEGM
CTSSWSCAHWKPLSDHTDDPDNEQVKQLLLEGVPVECAHSFIWNQDICQSVTENKIVDQD
LNRMRSELLVPGSQLVLGARESKIPILLIQQPGKVTGEDRLGWGSGWDILLPKGWGMAFW
IPFIYRGARVGGLKEAAVHSQYKRSPNVPGDFPDCRAGVLFAEDQAKDLLEKYQRRPPAK
RPNYVKLGTLAPFCCPWEQLTRDWESRIQTQEAAVIDSVPGAQETDPRRLGVPCVPKETC
QLSNEASIAENQPRKPEVTGCQAQAGTEVALEQNASEDHAAATGSQLCVVRSRKLLKQLS
SWCGPSSEVRRAPCRGQQELTRKACLSILADFPRALVWVSLSLLKKGSPEPHTMICVPSK
EDLFQLSQDQCYHGPCESRHSDPFKSLILKEKEKKKKEKRQDGEQGASKGQAAGAPTAGQ
EARIQGLWSGPLPGLTSHCSRPLLGFVTHGDFSMAVGCGEALGFVSVTGLLEMLSSQSAA
MRGLVLLRPPTSLQYRFARVTIEV
NT seq 3135 nt   +upstreamnt  +downstreamnt
atgtctaacgcaaaggagagaaaacatgctaagaaaatgagaagccagcccagtaatgtg
actctgtcctccggctttgtgactgagagagatggaaagcgccattttggggggaaacct
tcccaatctcagaaacaagagcttcattctggaacctcacggcagtggcagatcaagatg
agcccccacttacttcctgagtctgatgcgaatgagcagacttcctccaaaaccatgttt
aagaaaaagggaggctggaaagcaggtcctgagggcacttctcaggagatccccaaatat
ataaccgcttctacctttgctcaagcacgagctgccgagatcagtgccatgttaaaagct
gtgacccagaagtcctccaattccctggttttccagactcttccacggcacatgcggcga
agagccatgagccacaacgtcaaacgccttcctagaaggttgcaggagatggccaaaaag
gaggctgagaaagccgctcatcagaaaaaagaacattcgaaaaataaatgccacaaagcc
cgaagatgtcacataaaccggaccctggagtttaaccgcagacaacagaagaatatatgg
ttagagactcatatctggcatgccaaacggtttcatatggtgaagaggtggggttactgt
ctcggggagaggcccacggccaagagccaccgagcctgctatcgagctatgacagacctc
tgcctcctacaggatttatcatattactgttgtttggagttgaagggcaaagaggaagaa
atactgaaggcactttctcaaatgtgcagcatagacacaggactgacttttgctgcagtt
cactgcttgtctgggaagcggcaagggagcctcatgctttaccgggcaaataagtatccc
agagacatgcttgggccggttaccttcatctggaagtctagggagaccccaggggacgcc
tctgaggaaaggcagctgtggatctggcttcacccaactcttaaactggctgtcctagag
gaaataaaaacaacgtgccagtgttcagaacccgtcaagccaagtgtctgtgtgcctgcc
ccactcctgacaccagcccaggaagacattcaggcaggactagctgatgacaaaatcggc
aagaaaagaaaaaggagagatgatggggaaaatgctagacgagcgaagaagaccattggt
gacgggacaggagatccctgccagccacggtcgtggctctctcccactacagggatcgta
gtcagtgacttgaccatggagatgaacaggttccggctggtcggacctctttcgcactgt
atcctgacctcagcactgagggctgctcctgtacacagaggtgaggaggatgcagaggag
acaccgcatggctggtggactgacacgtgcaggagtcctcatggcctttctcttcaccag
agacaagaagcagtgtttcagttgttgggagggatatcgtcaccggcagaaattccagca
ggtactattctgggattgacagtcagggacccgagagtaaatttgcctccacagcggtgc
agagctttgcctgatccagaacgataccacgtttcagaatttatctgtgaggaagggatg
tgcaccagcagctggtcttgtgctcattggaagcctctgtctgaccatacagatgatcca
gacaatgagcaagttaagcagctgcttctggagggtgtgcctgtggagtgtgcacacagc
ttcatctggaaccaggatatctgccagagcgttacagagaataaaatcgtggaccaggat
ttaaaccgcatgagaagcgaattgctggtgcccggatcacagcttgttttaggggctcgt
gaatccaagatacctatacttctgattcagcagccgggaaaagtgactggcgaagaccga
ctgggctggggcagtggctgggacatcctccttcccaagggctggggcatggccttttgg
attccatttatctaccgaggtgcaagggttggtggattaaaagaggctgcagtacactct
cagtacaaacggtcacctaatgtcccaggcgacttcccagactgtcgtgctggcgttctc
ttcgctgaagaccaagctaaggaccttctagagaagtaccaaagacgcccccctgctaaa
aggcccaactatgttaagcttggcacactggctcctttctgttgtccctgggaacagctg
actcgggactgggagtccaggattcagacccaagaagcagctgttatagattcagtgcct
ggtgctcaagagactgacccaagaaggcttggagtgccttgtgtccccaaagagacctgc
cagctatcgaatgaggcaagcatagctgaaaaccaacctaggaagccggaagttacaggc
tgtcaagctcaggcggggactgaggtggccctggaacagaatgccagtgaggaccacgca
gctgccacaggtagccagctctgtgttgttcggagtaggaaactactgaagcaactctct
tcctggtgtgggcccagttctgaggtcaggagggctccctgcagaggccagcaagaactg
actagaaaggcttgcctgtccattctggctgatttccccagagcgctggtgtgggtcagc
ttgtccctgctcaagaagggcagcccagagccacacaccatgatctgtgtcccatccaag
gaggacttgttccagctcagtcaggatcagtgttaccatggaccctgcgaatccagacac
agcgacccatttaaaagcttgattctgaaggagaaagaaaagaagaagaaggagaagagg
caggatggggagcagggggcctccaagggccaggcagcaggggcacctacagctgggcag
gaggctcggattcaggggctgtggtcaggcccccttccggggctgacttcacactgctcc
aggcccctcctgggcttcgtgacacatggagatttctctatggctgttggctgtggagaa
gccttagggtttgttagtgtaacaggcttgctggaaatgttgtccagccagtcagcagcc
atgaggggcctggtcctgctgcggcctccgacctcgctgcaataccggtttgctagagtt
accattgaggtgtga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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