KEGG   Rattus norvegicus (rat): 315174
Entry
315174            CDS       T01003                                 
Symbol
Scube1
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 precursor
  KO
K24468  signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    315174 (Scube1)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 EGF-like domain-containing proteins
  hEGF / cEGF domain-containing proteins
   315174 (Scube1)
SSDB
Motif
Pfam: FXa_inhibition cEGF Ephrin_rec_like EGF_CA EGF_3 CUB EGF hEGF
Other DBs
NCBI-GeneID: 315174
NCBI-ProteinID: NP_001128356
RGD: 1309015
Ensembl: ENSRNOG00000010617
UniProt: F1M987
Position
7:complement(116639027..116760986)
AA seq 1018 aa
MGAAAVRWHLCLLLALGARGQLVGGSGLPGAVDVDECSEGTDDCHIDAICQNTPKSYKCL
CKPGYKGEGKQCEDIDECENDYYNGGCVHDCINIPGNYRCTCFDGFMLAHDGHNCLDVDE
CQDNNGGCQQICVNAMGSYECQCHSGFFLSDNQHTCIHRSNEGMNCMNKDHGCAHICRET
PKGGVACDCRPGFDLAQNQKDCTLTCNYGNGGCQHSCEDTDTGPMCGCHQKYALHADGRT
CIEKDEAAIERSQFNATSVADVDKRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPVG
FTLQPDGKTCKDINECLMNNGGCDHFCRNTVGSFECGCQKGHKLLTDERTCQDIDECSFE
RTCDHICINSPGSFQCLCHRGYILYGTTHCGDVDECSMNNGSCDQGCVNTKGSYECVCPP
GRRLHWNRKDCVEMSGCLSRSKASAQAQLSCGKVGGVENCFLSCLGQSLFMPDSETSYIL
SCGVPGLQGKAPPKRNGTSSSVGPGCSDAPTTPIRQKARFKIRDAKCHLRPRSQERAKDT
LRHPLLDNCHVTFVTLKCDSSKKRRRGRKSPSKEVSHITAEFEVEMKVEEASGSCEADCM
RKRAEQSLQAAIKTLRKSIGRHQFYVQVSGTEYEVAQRPAKAPEGTGTCGIGQILQDGKC
VPCAPGTYFSSEPGQCVPCVSGTYQDMEGQLSCTPCPSSEGLGLAGARNVSECGGQCSPG
FFSEDGFKPCQACPVGTYQPEPGRTGCFPCGGGLLTKQTGTASFQECEAKVHCSPGHHYN
TTTHRCIRCPVGTYQPEFGQNHCISCPGNTSTDFDGSTNVTHCKNQHCGGELGDYTGYIE
SPNYPGDYPANAECVWHIAPPPKRRILIVVPEIFLPIEDECGDVLVMRKSASPTSVTTYE
TCQTYERPIAFTSRSRKLWIQFKSNEANSGKGFQVPYVTYDEDYQQLIEDIVRDGRLYAS
ENHQEILKDKKLIKALFDVLAHPQNYFKYTAQESKEMFPRSFIKLLRSKVSRFLRPYK
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgggcgcggcggccgtgcgctggcacttgtgcctgctgctcgctctgggagcgcgaggg
cagctggtggggggcagcgggctgccaggagccgtggatgtggatgagtgctcagagggc
acagatgactgccacatagatgccatctgtcagaacacacccaagtcttacaaatgtctc
tgcaagccgggctacaagggggaagggaagcagtgcgaagacatcgatgagtgtgagaat
gactactacaacgggggctgtgtccatgactgcatcaacatccctgggaactacaggtgc
acctgctttgacggcttcatgctggcccacgatggacacaactgtctggatgtagatgag
tgccaagacaacaacggtggctgccagcagatctgtgtcaatgccatgggcagctatgag
tgccagtgccacagcggcttttttctcagtgacaaccaacacacctgcatacaccgctcc
aacgagggtatgaactgcatgaacaaagaccatggctgtgcccacatctgccgggagacg
cccaaaggtggggtagcctgtgactgcaggcccggctttgaccttgcccaaaaccagaag
gactgcacactaacctgtaactatggaaacggaggctgtcagcacagctgcgaggacacg
gacacgggccccatgtgtggctgccaccagaagtacgccctacacgccgatggtcggacg
tgcatcgagaaggatgaggctgcaattgagcgctctcagttcaatgccacgtcagtagct
gatgtggacaagcgtgtgaaacggcggctcctcatggagacgtgtgcggtgaacaacgga
ggctgtgaccggacgtgtaaggacactgccaccggcgtgagatgcagctgcccagttgga
ttcacgctacagccggatggaaagacatgcaaagacatcaacgagtgcttgatgaacaac
ggaggctgcgaccacttctgccgaaacactgtgggcagctttgaatgcggctgccaaaag
ggccacaagctactgacggacgagcggacatgccaagacattgacgagtgttcctttgag
cggacctgtgaccacatctgcatcaactcccccggcagcttccagtgcctgtgtcaccga
ggctacatactctacgggacaacccactgcggagacgtggatgagtgcagcatgaacaac
ggcagctgtgatcagggctgcgtcaacaccaagggcagctacgagtgtgtgtgcccacca
gggaggaggctgcactggaatcggaaggactgtgtggagatgagcgggtgcctgtctcgg
tccaaggcctctgcccaggcccagctgtcctgtggcaaggtgggtggagtggaaaactgc
ttcctgtcctgcctgggccagagtctcttcatgccagactcagaaaccagctacatcctg
agctgtggtgttccaggtctccagggcaaggcaccaccgaagcgcaatggcaccagctcc
agtgtggggcccggctgctcagatgcccccaccacccccatcagacagaaggcccgcttc
aagatcagagatgccaagtgccacctgcggccccgcagccaggagcgagcgaaggatacc
ctgaggcatccccttttagacaactgccacgtgactttcgtgaccctcaagtgcgactcc
tccaagaagaggcgtcgaggccgcaagtccccctccaaggaggtgtcccacatcacggca
gagtttgaggtagagatgaaggtggaagaggcctcaggctcctgcgaagcagactgcatg
cggaagcgtgccgagcagagcctgcaggctgccatcaagactctgcggaagtccatcggc
cggcaccagttctacgtccaggtctccggcactgagtacgaggtggcccagcggccagcc
aaggcaccggaggggaccgggacatgtggcataggccaaatactacaggatggcaagtgt
gtaccatgtgctcctggcacctacttcagtagtgagccaggccaatgcgtgccgtgtgtg
tcgggaacctaccaggacatggaaggccagctcagctgcacgccgtgccccagcagcgaa
gggctgggtctggctggtgcccgcaacgtatccgaatgtggaggccagtgttctccaggc
ttcttctcagaggatgggttcaagccttgtcaggcctgccctgtgggcacataccagcct
gagcctgggcgtaccggctgcttcccctgtggaggtgggctgctcaccaagcagacgggt
actgcctctttccaggaatgtgaggccaaagtacactgctctcccggccaccactacaat
accactacccaccggtgcatccgatgtcctgtgggtacctatcaacccgagtttggccag
aaccattgcatctcctgtccgggcaacaccagcaccgattttgatggttccaccaatgtc
acacactgcaaaaaccagcactgcggtggcgagcttggtgactacacaggctatatcgag
tcccccaactaccctggagactacccagccaatgcggagtgtgtgtggcacattgcgcct
ccccccaagcgcaggatcctcattgtggtccctgagatcttcctgcccatcgaggatgag
tgtggcgatgttctggtcatgaggaagagcgcctcgcccacgtcagtcaccacctatgag
acgtgccagacctacgagcggcctatcgccttcacctcccgctcccgcaaactctggatc
cagttcaaatccaacgaggccaacagtggcaaagggtttcaagtgccctacgtcacctat
gacgaggactaccagcagctaatagaagacatcgtgcgcgatgggcgcttgtatgcctcg
gagaaccatcaggagattttgaaagacaagaagctgatcaaggccctctttgatgtgttg
gcacacccacaaaactacttcaaatacacagcccaggagtcaaaggagatgttcccccgg
tcctttatcaaacttctgcgttccaaagtgtctcggttcctgcggccctacaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (30)   

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