KEGG   Rattus norvegicus (rat): 315264
Entry
315264            CDS       T01003                                 
Symbol
Pus7l
Name
(RefSeq) pseudouridylate synthase PUS7L
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    315264 (Pus7l)
Enzymes [BR:rno01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     315264 (Pus7l)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    315264 (Pus7l)
 Prokaryotic type
    315264 (Pus7l)
SSDB
Motif
Pfam: TruD R3H
Other DBs
NCBI-GeneID: 315264
NCBI-ProteinID: XP_002729893
RGD: 1304692
Ensembl: ENSRNOG00000022570
UniProt: D4ABN2
Position
7:complement(127538785..127561936)
AA seq 709 aa
MEEDADDGIRSGSLCFINDHVGFQGSIKTSPGDFIVTEIDEQGRLVSKATDEPLREFSKT
QPEPSNCQVKKPKLNTQTVDLDCENNKEAAKSPGHSPAGRSEGDRVQPAGSDRDSEKENS
VRCATSKCEVESVGLLSSLLDESTHTSLDHFARDVKEMWNSSTELTEPSPELSLGRILDK
RQRAALHSAVRQTFPFLITVGNNSEVVVKPSLEYKELSHLVSEEEALGFFRYLDAKKENS
KFTFQPDPNKDHRKAVHHFLNKKFGNLVETKSFPGQSHSAGNPNTAITVRFREKAHGKRA
HPEGKRRRAVYTAFTLQKENLEMFEAIGFLAIQLGVIPSDFSYAGLKDKKAITYQSMVVR
KVTPERLKTIEEEIKKKRMNVFNVRSVDDSLRLGQLKGNHFEIIIRNLRNQPNDSANLRE
RVLEAIENVKNKGFVNYYGPQRFGKGKKIQTDRIGLALLKNEMVKAIKLFLTPEDADDPV
NKAKKYFLQTEDAKGTLSLMPEFRVRERALLESLHRFGVTEEGCVQAWFSFPHSMRIFYI
HAYSSRIWNEAASYRLAAYGPKVVKGDLVCLDEDADEHLPSSKVHLVTEEEESADTYALH
QVVLPVLGYNVQYPENKVGRWYQGVLGRDGLQACRFRVPALKLNVPGCYRHIVKHPHNVS
HRLVHPDPAELRAEGPHADDTASSLALSFDLDASCYATVCLREMMKDDI
NT seq 2130 nt   +upstreamnt  +downstreamnt
atggaagaggacgcggatgacggaatcaggtctggctccttgtgtttcatcaacgaccac
gtcggatttcagggcagtataaaaacctcacccggtgacttcatcgttactgagattgac
gaacagggacggttagtcagcaaggccaccgacgaaccccttcgtgaatttagtaaaaca
cagcctgaaccgagtaattgccaagtcaagaagccaaagctaaatactcagactgtagac
ttagactgtgaaaataacaaggaagctgctaagtcgcccgggcactcacccgccgggcgc
tcggagggtgaccgggtccagcctgcgggctcggatcgtgactcagaaaaagaaaacagc
gtccgctgtgcgacttctaaatgtgaagtagaaagcgttggtttattaagttcactttta
gatgaaagcactcacacatcgctggatcactttgcccgtgacgtcaaagagatgtggaat
tcaagcactgaactaaccgaaccgtctcctgaattgtccctaggcaggatccttgacaaa
cgccaaagggctgccctgcacagtgctgtgaggcagacatttcccttcttgataaccgta
ggaaacaacagcgaagtggttgtaaaaccgagtcttgagtataaggaactcagccacttg
gtgtctgaagaggaagcacttggctttttcagatatttggacgcaaagaaagaaaactcc
aagtttacctttcaaccggatccaaacaaagatcacaggaaggccgtgcaccattttctc
aacaagaagttcggaaacctggtggaaaccaagtcttttcctgggcagagccacagtgct
gggaacccaaacacagccataaccgtgagattccgggaaaaagcacacggaaagagagct
cacccggaaggcaagagaagaagagcagtgtatacagctttcaccctacaaaaggaaaat
ctggagatgttcgaagcaattggttttctggccatccaacttggcgttattccttcggat
tttagttacgcgggccttaaagacaagaaagcaatcacctatcaatcaatggtagttaga
aaagtgactcctgagagattgaaaactatcgaagaagaaattaagaagaagagaatgaat
gtgtttaatgttcggtctgtagacgattctctcagacttggtcagctcaaaggaaaccac
tttgaaattatcatcagaaacctaagaaatcaaccaaatgattctgccaacctgagagag
agagttttggaggcaatagaaaatgttaagaataaaggttttgtgaattactacgggcca
cagagatttgggaaaggaaagaaaatccaaacagaccgaattggattggctctcctgaag
aatgaaatggtaaaggccataaaattatttctcacgccagaagacgcggatgatcctgtc
aataaagcaaagaaatacttcctccaaactgaggacgctaaaggcacgctttcactgatg
cccgagttccgggttcgagagcgcgcgctgctggagtccttgcatcgctttggcgtgacg
gaggaaggctgcgtccaggcctggttctccttcccccattccatgcgtatattctacatc
cacgcatacagtagcaggatttggaacgaggcagcgtcgtacagactggcagcctacgga
cccaaggtggtgaagggggacctggtctgcttggatgaagatgcggacgagcatcttcca
agcagtaaagttcacctggtgaccgaggaagaggagtcagctgacacatatgcactgcac
caggtcgttctgcccgtgcttggatacaacgttcagtacccggagaacaaagtagggcgg
tggtaccaaggggtcctcggcagggacggactgcaggcctgtaggttcagggtgcccgcc
ctgaagctgaatgtacccggctgctacaggcacatcgtgaaacacccccacaatgtatca
caccgactggtccatcccgaccccgccgagcttcgagcggaaggtccccacgccgacgac
acagcctcatcgctggccttatcctttgacctcgacgcttcgtgctacgccaccgtttgt
ctgagggaaatgatgaaggacgacatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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